RNA–Protein interactions for RNA: ENST00000455841.6

GTF2IRD1-203, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD1, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-203ENST00000455841 CCL15Q16663 113 aa16.47■□□□□ 0.23
GTF2IRD1-203ENST00000455841 ZC3H3Q8IXZ2 948 aaKnown RBP16.47■□□□□ 0.23
GTF2IRD1-203ENST00000455841 FBXL13Q8NEE6 735 aa16.47■□□□□ 0.23
GTF2IRD1-203ENST00000455841 EPB41L5Q9HCM4 733 aa16.47■□□□□ 0.23
GTF2IRD1-203ENST00000455841 BZW2Q9Y6E2 419 aaKnown RBP16.47■□□□□ 0.23
GTF2IRD1-203ENST00000455841 SYNGAP1Q96PV0 1343 aa16.47■□□□□ 0.23
GTF2IRD1-203ENST00000455841 MAFGO15525 162 aa16.47■□□□□ 0.23
GTF2IRD1-203ENST00000455841 MAPTP10636 758 aaKnown RBP16.47■□□□□ 0.23
GTF2IRD1-203ENST00000455841 MUTP22033 750 aa16.47■□□□□ 0.23
GTF2IRD1-203ENST00000455841 GJA5P36382 358 aa16.47■□□□□ 0.23
GTF2IRD1-203ENST00000455841 PPATQ06203 517 aa16.47■□□□□ 0.23
GTF2IRD1-203ENST00000455841 ORC1Q13415 861 aa16.47■□□□□ 0.23
GTF2IRD1-203ENST00000455841 C1orf220Q5T0J3 134 aa16.47■□□□□ 0.23
GTF2IRD1-203ENST00000455841 DDX42Q86XP3 938 aaKnown RBP eCLIP16.47■□□□□ 0.23
GTF2IRD1-203ENST00000455841 KREMEN1Q96MU8 473 aa16.47■□□□□ 0.23
GTF2IRD1-203ENST00000455841 AGPAT1Q99943 283 aa16.47■□□□□ 0.23
GTF2IRD1-203ENST00000455841 C1orf112Q9NSG2 853 aa16.47■□□□□ 0.23
GTF2IRD1-203ENST00000455841 RAB20Q9NX57 234 aa16.47■□□□□ 0.23
GTF2IRD1-203ENST00000455841 ADAMTS5Q9UNA0 930 aa16.47■□□□□ 0.23
GTF2IRD1-203ENST00000455841 CASP8Q14790 479 aa16.46■□□□□ 0.23
GTF2IRD1-203ENST00000455841 PAXIP1Q6ZW49 1069 aaPredicted RBP16.46■□□□□ 0.23
GTF2IRD1-203ENST00000455841 MAP4K3Q8IVH8 894 aa16.46■□□□□ 0.23
GTF2IRD1-203ENST00000455841 CPA5Q8WXQ8 436 aa16.46■□□□□ 0.23
GTF2IRD1-203ENST00000455841 SYN2Q92777 582 aaPredicted RBP16.46■□□□□ 0.23
GTF2IRD1-203ENST00000455841 DPH5Q9H2P9 285 aa16.46■□□□□ 0.23
GTF2IRD1-203ENST00000455841 NXF1Q9UBU9 619 aaKnown RBP16.46■□□□□ 0.23
GTF2IRD1-203ENST00000455841 USTQ9Y2C2 406 aa16.46■□□□□ 0.23
GTF2IRD1-203ENST00000455841 CLDN3O15551 220 aa16.46■□□□□ 0.23
GTF2IRD1-203ENST00000455841 HEXIM1O94992 359 aaKnown RBP16.46■□□□□ 0.23
GTF2IRD1-203ENST00000455841 NCKAP1LP55160 1127 aa16.46■□□□□ 0.23
GTF2IRD1-203ENST00000455841 NEDD9Q14511 834 aa16.46■□□□□ 0.23
GTF2IRD1-203ENST00000455841 WDR44Q5JSH3 913 aa16.46■□□□□ 0.23
GTF2IRD1-203ENST00000455841 TAS1R3Q7RTX0 852 aa16.46■□□□□ 0.23
GTF2IRD1-203ENST00000455841 NOP9Q86U38 636 aaKnown RBP16.46■□□□□ 0.23
GTF2IRD1-203ENST00000455841 ZNF653Q96CK0 615 aa16.46■□□□□ 0.23
GTF2IRD1-203ENST00000455841 FUT8Q9BYC5 575 aa16.46■□□□□ 0.23
GTF2IRD1-203ENST00000455841 FAM49AQ9H0Q0 323 aaPredicted RBP16.46■□□□□ 0.23
GTF2IRD1-203ENST00000455841 AGTPBP1Q9UPW5 1226 aa16.46■□□□□ 0.23
GTF2IRD1-203ENST00000455841 AKT3Q9Y243 479 aa16.46■□□□□ 0.23
GTF2IRD1-203ENST00000455841 SPOPO43791 374 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 FAM160B1Q5W0V3 765 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 PHIPQ8WWQ0 1821 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 SPDYE5A6NIY4 337 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 EDN1P05305 212 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 CCDC172P0C7W6 258 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 ITGA4P13612 1032 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 FGFR4P22455 802 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 ERVK-9P63128 1117 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 CYP24A1Q07973 514 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 BRD3Q15059 726 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 PRAMEF19Q5SWL8 479 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 TMEM270Q6UE05 265 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 PCYT2Q99447 389 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 NFU1Q9UMS0 254 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 PDHXO00330 501 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 KRIT1O00522 736 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 B4GALT5O43286 388 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 LYPLA2O95372 231 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 GJB6O95452 261 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 IRX5P78411 483 aaPredicted RBP16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 ALCAMQ13740 583 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 CAPSQ13938 189 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 NOL9Q5SY16 702 aaKnown RBP16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 BEND6Q5SZJ8 279 aaPredicted RBP16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 DPY19L2P1Q6NXN4 242 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 XRRA1Q6P2D8 792 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 HDXQ7Z353 690 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 TPCN2Q8NHX9 752 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 TAF1DQ9H5J8 278 aaPredicted RBP16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 AMFRQ9UKV5 643 aa16.45■□□□□ 0.22
GTF2IRD1-203ENST00000455841 A0A0G2JLL6 359 aaPredicted RBP16.44■□□□□ 0.22
GTF2IRD1-203ENST00000455841 KIF4AO95239 1232 aa16.44■□□□□ 0.22
GTF2IRD1-203ENST00000455841 HOXA7P31268 230 aaPredicted RBP16.44■□□□□ 0.22
GTF2IRD1-203ENST00000455841 ADCYAP1R1P41586 468 aa16.44■□□□□ 0.22
GTF2IRD1-203ENST00000455841 PDE6CP51160 858 aa16.44■□□□□ 0.22
GTF2IRD1-203ENST00000455841 MFAP3P55082 362 aa16.44■□□□□ 0.22
GTF2IRD1-203ENST00000455841 JAM2P57087 298 aa16.44■□□□□ 0.22
GTF2IRD1-203ENST00000455841 TUBB2AQ13885 445 aa16.44■□□□□ 0.22
GTF2IRD1-203ENST00000455841 PRRT2Q7Z6L0 340 aaPredicted RBP16.44■□□□□ 0.22
GTF2IRD1-203ENST00000455841 OR5B17Q8NGF7 314 aa16.44■□□□□ 0.22
GTF2IRD1-203ENST00000455841 LENG1Q96BZ8 264 aaPredicted RBP16.44■□□□□ 0.22
GTF2IRD1-203ENST00000455841 TUBB2BQ9BVA1 445 aa16.44■□□□□ 0.22
GTF2IRD1-203ENST00000455841 PCDHB4Q9Y5E5 795 aa16.44■□□□□ 0.22
GTF2IRD1-203ENST00000455841 UBE4BO95155 1302 aa16.44■□□□□ 0.22
GTF2IRD1-203ENST00000455841 ZRANB2O95218 330 aaKnown RBP eCLIP16.44■□□□□ 0.22
GTF2IRD1-203ENST00000455841 CELF2O95319 508 aaKnown RBP16.44■□□□□ 0.22
GTF2IRD1-203ENST00000455841 HLA-DRAP01903 254 aa16.44■□□□□ 0.22
GTF2IRD1-203ENST00000455841 VTNP04004 478 aa16.44■□□□□ 0.22
GTF2IRD1-203ENST00000455841 DNERQ8NFT8 737 aa16.44■□□□□ 0.22
GTF2IRD1-203ENST00000455841 CELF4Q9BZC1 486 aaKnown RBP16.44■□□□□ 0.22
GTF2IRD1-203ENST00000455841 FGGP02679 453 aa16.44■□□□□ 0.22
GTF2IRD1-203ENST00000455841 MARCKSL1P49006 195 aa16.44■□□□□ 0.22
GTF2IRD1-203ENST00000455841 RNF10Q8N5U6 811 aaKnown RBP16.44■□□□□ 0.22
GTF2IRD1-203ENST00000455841 CEP89Q96ST8 783 aa16.44■□□□□ 0.22
GTF2IRD1-203ENST00000455841 GPR88Q9GZN0 384 aa16.44■□□□□ 0.22
GTF2IRD1-203ENST00000455841 PTPRJQ12913 1337 aa16.43■□□□□ 0.22
GTF2IRD1-203ENST00000455841 UMODL1Q5DID0 1318 aa16.43■□□□□ 0.22
GTF2IRD1-203ENST00000455841 H3BQF6 201 aa16.43■□□□□ 0.22
GTF2IRD1-203ENST00000455841 PJA2O43164 708 aa16.43■□□□□ 0.22
GTF2IRD1-203ENST00000455841 STBD1O95210 358 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms