RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 NOLC1Q14978 699 aaKnown RBP eCLIP14.26□□□□□ -0.13
VPS33A-202ENST00000451053 DCAF4L1Q3SXM0 396 aa14.26□□□□□ -0.13
VPS33A-202ENST00000451053 ZNF658Q5TYW1 1059 aaPredicted RBP14.26□□□□□ -0.13
VPS33A-202ENST00000451053 MRPL10Q7Z7H8 261 aaKnown RBP14.26□□□□□ -0.13
VPS33A-202ENST00000451053 NPAS4Q8IUM7 802 aa14.26□□□□□ -0.13
VPS33A-202ENST00000451053 LPPQ93052 612 aa14.26□□□□□ -0.13
VPS33A-202ENST00000451053 TOP1MTQ969P6 601 aa14.26□□□□□ -0.13
VPS33A-202ENST00000451053 SLC9A7Q96T83 725 aa14.26□□□□□ -0.13
VPS33A-202ENST00000451053 ADPGKQ9BRR6 497 aa14.26□□□□□ -0.13
VPS33A-202ENST00000451053 TCHPQ9BT92 498 aa14.26□□□□□ -0.13
VPS33A-202ENST00000451053 TRIM6Q9C030 488 aaPredicted RBP14.26□□□□□ -0.13
VPS33A-202ENST00000451053 TMEM206Q9H813 350 aa14.26□□□□□ -0.13
VPS33A-202ENST00000451053 RNF19AQ9NV58 838 aa14.26□□□□□ -0.13
VPS33A-202ENST00000451053 TMEM161AQ9NX61 479 aa14.26□□□□□ -0.13
VPS33A-202ENST00000451053 DACH1Q9UI36 760 aa14.26□□□□□ -0.13
VPS33A-202ENST00000451053 TTC3P53804 2025 aa14.25□□□□□ -0.13
VPS33A-202ENST00000451053 CLDN3O15551 220 aa14.25□□□□□ -0.13
VPS33A-202ENST00000451053 TGFB1I1O43294 461 aa14.25□□□□□ -0.13
VPS33A-202ENST00000451053 ZNF623O75123 536 aa14.25□□□□□ -0.13
VPS33A-202ENST00000451053 MCF2P10911 925 aa14.25□□□□□ -0.13
VPS33A-202ENST00000451053 FGFR1P11362 822 aa14.25□□□□□ -0.13
VPS33A-202ENST00000451053 SKIP12755 728 aa14.25□□□□□ -0.13
VPS33A-202ENST00000451053 ADSSP30520 456 aa14.25□□□□□ -0.13
VPS33A-202ENST00000451053 MATR3P43243 847 aaKnown RBP eCLIP14.25□□□□□ -0.13
VPS33A-202ENST00000451053 GATMP50440 423 aa14.25□□□□□ -0.13
VPS33A-202ENST00000451053 NLRP12P59046 1061 aa14.25□□□□□ -0.13
VPS33A-202ENST00000451053 MCL1Q07820 350 aa14.25□□□□□ -0.13
VPS33A-202ENST00000451053 KNOP1Q1ED39 458 aaKnown RBP14.25□□□□□ -0.13
VPS33A-202ENST00000451053 HERC6Q8IVU3 1022 aa14.25□□□□□ -0.13
VPS33A-202ENST00000451053 CEP120Q8N960 986 aa14.25□□□□□ -0.13
VPS33A-202ENST00000451053 PHOSPHO2Q8TCD6 241 aa14.25□□□□□ -0.13
VPS33A-202ENST00000451053 FUCA2Q9BTY2 467 aa14.25□□□□□ -0.13
VPS33A-202ENST00000451053 APOL6Q9BWW8 343 aa14.25□□□□□ -0.13
VPS33A-202ENST00000451053 NAT10Q9H0A0 1025 aaKnown RBP14.25□□□□□ -0.13
VPS33A-202ENST00000451053 RNF39Q9H2S5 420 aa14.25□□□□□ -0.13
VPS33A-202ENST00000451053 ELAC1Q9H777 363 aaKnown RBP14.25□□□□□ -0.13
VPS33A-202ENST00000451053 LRFN2Q9ULH4 789 aa14.25□□□□□ -0.13
VPS33A-202ENST00000451053 PCDHB7Q9Y5E2 793 aa14.25□□□□□ -0.13
VPS33A-202ENST00000451053 STYXL1Q9Y6J8 313 aa14.25□□□□□ -0.13
VPS33A-202ENST00000451053 COL4A6Q14031 1691 aa14.25□□□□□ -0.13
VPS33A-202ENST00000451053 CEP290O15078 2479 aa14.25□□□□□ -0.13
VPS33A-202ENST00000451053 A0A0B4J269 797 aa14.24□□□□□ -0.13
VPS33A-202ENST00000451053 GJB5O95377 273 aa14.24□□□□□ -0.13
VPS33A-202ENST00000451053 EOMESO95936 686 aa14.24□□□□□ -0.13
VPS33A-202ENST00000451053 STAG3L1P0CL83 205 aa14.24□□□□□ -0.13
VPS33A-202ENST00000451053 CD44P16070 742 aaKnown RBP14.24□□□□□ -0.13
VPS33A-202ENST00000451053 PPP1R2P41236 205 aa14.24□□□□□ -0.13
VPS33A-202ENST00000451053 PRCPP42785 496 aa14.24□□□□□ -0.13
VPS33A-202ENST00000451053 RABGGTBP53611 331 aa14.24□□□□□ -0.13
VPS33A-202ENST00000451053 SEZ6Q53EL9 994 aa14.24□□□□□ -0.13
VPS33A-202ENST00000451053 CLLU1OSQ5K130 101 aa14.24□□□□□ -0.13
VPS33A-202ENST00000451053 AGMOQ6ZNB7 445 aa14.24□□□□□ -0.13
VPS33A-202ENST00000451053 APBB1IPQ7Z5R6 666 aaPredicted RBP14.24□□□□□ -0.13
VPS33A-202ENST00000451053 TMEM192Q8IY95 271 aa14.24□□□□□ -0.13
VPS33A-202ENST00000451053 THNSL1Q8IYQ7 743 aa14.24□□□□□ -0.13
VPS33A-202ENST00000451053 GUF1Q8N442 669 aaKnown RBP14.24□□□□□ -0.13
VPS33A-202ENST00000451053 MLKLQ8NB16 471 aa14.24□□□□□ -0.13
VPS33A-202ENST00000451053 CBWD1Q9BRT8 395 aa14.24□□□□□ -0.13
VPS33A-202ENST00000451053 GBP3Q9H0R5 595 aa14.24□□□□□ -0.13
VPS33A-202ENST00000451053 KCTD10Q9H3F6 313 aa14.24□□□□□ -0.13
VPS33A-202ENST00000451053 SNTG2Q9NY99 539 aa14.24□□□□□ -0.13
VPS33A-202ENST00000451053 FAM189A1O60320 539 aa14.23□□□□□ -0.13
VPS33A-202ENST00000451053 KIF20AO95235 890 aa14.23□□□□□ -0.13
VPS33A-202ENST00000451053 ITGA4P13612 1032 aa14.23□□□□□ -0.13
VPS33A-202ENST00000451053 AKAP5P24588 427 aa14.23□□□□□ -0.13
VPS33A-202ENST00000451053 GRM5P41594 1212 aa14.23□□□□□ -0.13
VPS33A-202ENST00000451053 OSTNP61366 133 aa14.23□□□□□ -0.13
VPS33A-202ENST00000451053 COBLL1Q53SF7 1204 aa14.23□□□□□ -0.13
VPS33A-202ENST00000451053 CT47A1Q5JQC4 288 aaPredicted RBP14.23□□□□□ -0.13
VPS33A-202ENST00000451053 ZBTB41Q5SVQ8 909 aa14.23□□□□□ -0.13
VPS33A-202ENST00000451053 SLFN12LQ6IEE8 588 aa14.23□□□□□ -0.13
VPS33A-202ENST00000451053 ZSWIM2Q8NEG5 633 aa14.23□□□□□ -0.13
VPS33A-202ENST00000451053 HELQQ8TDG4 1101 aa14.23□□□□□ -0.13
VPS33A-202ENST00000451053 POMGNT1Q8WZA1 660 aa14.23□□□□□ -0.13
VPS33A-202ENST00000451053 PGBD4Q96DM1 585 aa14.23□□□□□ -0.13
VPS33A-202ENST00000451053 ZBED2Q9BTP6 218 aa14.23□□□□□ -0.13
VPS33A-202ENST00000451053 MSTO1Q9BUK6 570 aa14.23□□□□□ -0.13
VPS33A-202ENST00000451053 PCIF1Q9H4Z3 704 aa14.23□□□□□ -0.13
VPS33A-202ENST00000451053 RC3H2Q9HBD1 1191 aaKnown RBP14.23□□□□□ -0.13
VPS33A-202ENST00000451053 AGPAT3Q9NRZ7 376 aa14.23□□□□□ -0.13
VPS33A-202ENST00000451053 A0A1W2PPC1 479 aa14.22□□□□□ -0.13
VPS33A-202ENST00000451053 PPP1R3GB7ZBB8 358 aa14.22□□□□□ -0.13
VPS33A-202ENST00000451053 CLIC2O15247 247 aa14.22□□□□□ -0.13
VPS33A-202ENST00000451053 OGTO15294 1046 aa14.22□□□□□ -0.13
VPS33A-202ENST00000451053 DGKIO75912 1065 aa14.22□□□□□ -0.13
VPS33A-202ENST00000451053 RECQL4O94761 1208 aa14.22□□□□□ -0.13
VPS33A-202ENST00000451053 MYOGP15173 224 aa14.22□□□□□ -0.13
VPS33A-202ENST00000451053 GARTP22102 1010 aa14.22□□□□□ -0.13
VPS33A-202ENST00000451053 TNFSF9P41273 254 aa14.22□□□□□ -0.13
VPS33A-202ENST00000451053 HTRA4P83105 476 aaPredicted RBP14.22□□□□□ -0.13
VPS33A-202ENST00000451053 STIM1Q13586 685 aa14.22□□□□□ -0.13
VPS33A-202ENST00000451053 ARMCX5Q6P1M9 558 aa14.22□□□□□ -0.13
VPS33A-202ENST00000451053 HS2ST1Q7LGA3 356 aa14.22□□□□□ -0.13
VPS33A-202ENST00000451053 ADSSL1Q8N142 457 aa14.22□□□□□ -0.13
VPS33A-202ENST00000451053 ZNF689Q96CS4 500 aaPredicted RBP14.22□□□□□ -0.13
VPS33A-202ENST00000451053 SAAL1Q96ER3 474 aa14.22□□□□□ -0.13
VPS33A-202ENST00000451053 CXCL16Q9H2A7 254 aa14.22□□□□□ -0.13
VPS33A-202ENST00000451053 SEMA6BQ9H3T3 888 aa14.22□□□□□ -0.13
VPS33A-202ENST00000451053 RSAD1Q9HA92 442 aa14.22□□□□□ -0.13
VPS33A-202ENST00000451053 TYW1Q9NV66 732 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms