RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 MAFAQ8NHW3 353 aaPredicted RBP17.24■□□□□ 0.35
TOP3B-211ENST00000449704 ZFP42Q96MM3 310 aa17.24■□□□□ 0.35
TOP3B-211ENST00000449704 ZNF558Q96NG5 402 aa17.24■□□□□ 0.35
TOP3B-211ENST00000449704 FAM193BQ96PV7 902 aaPredicted RBP17.24■□□□□ 0.35
TOP3B-211ENST00000449704 FIZ1Q96SL8 496 aa17.24■□□□□ 0.35
TOP3B-211ENST00000449704 MRPL44Q9H9J2 332 aaKnown RBP17.24■□□□□ 0.35
TOP3B-211ENST00000449704 MAGEF1Q9HAY2 307 aa17.24■□□□□ 0.35
TOP3B-211ENST00000449704 ALG13Q9NP73 1137 aaKnown RBP17.24■□□□□ 0.35
TOP3B-211ENST00000449704 SNTG2Q9NY99 539 aa17.24■□□□□ 0.35
TOP3B-211ENST00000449704 KANSL3Q9P2N6 904 aa17.24■□□□□ 0.35
TOP3B-211ENST00000449704 TBX20Q9UMR3 447 aa17.24■□□□□ 0.35
TOP3B-211ENST00000449704 PLAGL2Q9UPG8 496 aa17.24■□□□□ 0.35
TOP3B-211ENST00000449704 GDAQ9Y2T3 454 aa17.24■□□□□ 0.35
TOP3B-211ENST00000449704 MTCH2Q9Y6C9 303 aa17.24■□□□□ 0.35
TOP3B-211ENST00000449704 COL6A3P12111 3177 aa17.24■□□□□ 0.35
TOP3B-211ENST00000449704 MYH15Q9Y2K3 1946 aa17.23■□□□□ 0.35
TOP3B-211ENST00000449704 A0A1W2PQ27 194 aa17.23■□□□□ 0.35
TOP3B-211ENST00000449704 A0A1W2PQ64 194 aa17.23■□□□□ 0.35
TOP3B-211ENST00000449704 A0A1W2PQD8 194 aa17.23■□□□□ 0.35
TOP3B-211ENST00000449704 ARL5CA6NH57 179 aa17.23■□□□□ 0.35
TOP3B-211ENST00000449704 GRM6O15303 877 aa17.23■□□□□ 0.35
TOP3B-211ENST00000449704 ZC3H11AO75152 810 aaKnown RBP eCLIP17.23■□□□□ 0.35
TOP3B-211ENST00000449704 CSPG5O95196 566 aa17.23■□□□□ 0.35
TOP3B-211ENST00000449704 SLFN14P0C7P3 912 aa17.23■□□□□ 0.35
TOP3B-211ENST00000449704 SCP2P22307 547 aa17.23■□□□□ 0.35
TOP3B-211ENST00000449704 MATR3P43243 847 aaKnown RBP eCLIP17.23■□□□□ 0.359e-6■■□□□ 12
TOP3B-211ENST00000449704 SYKP43405 635 aa17.23■□□□□ 0.35
TOP3B-211ENST00000449704 PTPROQ16827 1216 aa17.23■□□□□ 0.35
TOP3B-211ENST00000449704 ZC2HC1CQ53FD0 456 aaPredicted RBP17.23■□□□□ 0.35
TOP3B-211ENST00000449704 KCNT2Q6UVM3 1135 aa17.23■□□□□ 0.35
TOP3B-211ENST00000449704 MPZL3Q6UWV2 235 aa17.23■□□□□ 0.35
TOP3B-211ENST00000449704 CCDC65Q8IXS2 484 aa17.23■□□□□ 0.35
TOP3B-211ENST00000449704 MRPS27Q92552 414 aaKnown RBP17.23■□□□□ 0.35
TOP3B-211ENST00000449704 P2RX5Q93086 422 aa17.23■□□□□ 0.35
TOP3B-211ENST00000449704 ZBTB45Q96K62 511 aaPredicted RBP17.23■□□□□ 0.35
TOP3B-211ENST00000449704 TRIM9Q9C026 710 aa17.23■□□□□ 0.35
TOP3B-211ENST00000449704 CDT1Q9H211 546 aa17.23■□□□□ 0.35
TOP3B-211ENST00000449704 PTPRHQ9HD43 1115 aa17.23■□□□□ 0.35
TOP3B-211ENST00000449704 CHMP5Q9NZZ3 219 aa17.23■□□□□ 0.35
TOP3B-211ENST00000449704 ANKFY1Q9P2R3 1169 aa17.23■□□□□ 0.35
TOP3B-211ENST00000449704 SEL1LQ9UBV2 794 aa17.23■□□□□ 0.35
TOP3B-211ENST00000449704 HNRNPDLO14979 420 aaKnown RBP17.22■□□□□ 0.35
TOP3B-211ENST00000449704 TOM1L1O75674 476 aa17.22■□□□□ 0.35
TOP3B-211ENST00000449704 RECQL4O94761 1208 aa17.22■□□□□ 0.35
TOP3B-211ENST00000449704 ITGB1P05556 798 aa17.22■□□□□ 0.35
TOP3B-211ENST00000449704 POU3F3P20264 500 aaPredicted RBP17.22■□□□□ 0.35
TOP3B-211ENST00000449704 CASP1P29466 404 aa17.22■□□□□ 0.35
TOP3B-211ENST00000449704 ALDH7A1P49419 539 aaKnown RBP17.22■□□□□ 0.35
TOP3B-211ENST00000449704 LIG4P49917 911 aa17.22■□□□□ 0.35
TOP3B-211ENST00000449704 SCNN1GP51170 649 aa17.22■□□□□ 0.35
TOP3B-211ENST00000449704 NDUFA8P51970 172 aa17.22■□□□□ 0.35
TOP3B-211ENST00000449704 BCAR1P56945 870 aa17.22■□□□□ 0.35
TOP3B-211ENST00000449704 OSTNP61366 133 aa17.22■□□□□ 0.35
TOP3B-211ENST00000449704 CSPP1Q1MSJ5 1256 aa17.22■□□□□ 0.35
TOP3B-211ENST00000449704 ZNF720Q7Z2F6 126 aa17.22■□□□□ 0.35
TOP3B-211ENST00000449704 ZNF280BQ86YH2 543 aa17.22■□□□□ 0.35
TOP3B-211ENST00000449704 GRAMD1CQ8IYS0 662 aa17.22■□□□□ 0.35
TOP3B-211ENST00000449704 SPPL3Q8TCT6 385 aa17.22■□□□□ 0.35
TOP3B-211ENST00000449704 RPS6KC1Q96S38 1066 aa17.22■□□□□ 0.35
TOP3B-211ENST00000449704 C7orf25Q9BPX7 421 aa17.22■□□□□ 0.35
TOP3B-211ENST00000449704 BLZF1Q9H2G9 400 aa17.22■□□□□ 0.35
TOP3B-211ENST00000449704 NRDE2Q9H7Z3 1164 aa17.22■□□□□ 0.35
TOP3B-211ENST00000449704 MIOSQ9NXC5 875 aa17.22■□□□□ 0.35
TOP3B-211ENST00000449704 LMCD1Q9NZU5 365 aa17.22■□□□□ 0.35
TOP3B-211ENST00000449704 HPSEQ9Y251 543 aa17.22■□□□□ 0.35
TOP3B-211ENST00000449704 CDH23Q9H251 3354 aa17.21■□□□□ 0.35
TOP3B-211ENST00000449704 FRMD3A2A2Y4 597 aa17.21■□□□□ 0.35
TOP3B-211ENST00000449704 NT5C1B-RDH14C9J2C7 533 aa17.21■□□□□ 0.35
TOP3B-211ENST00000449704 ACTN4O43707 911 aaKnown RBP17.21■□□□□ 0.35
TOP3B-211ENST00000449704 FGF18O76093 207 aa17.21■□□□□ 0.35
TOP3B-211ENST00000449704 GCNT3O95395 438 aa17.21■□□□□ 0.35
TOP3B-211ENST00000449704 MCF2P10911 925 aa17.21■□□□□ 0.35
TOP3B-211ENST00000449704 PROZP22891 400 aa17.21■□□□□ 0.35
TOP3B-211ENST00000449704 ABCD1P33897 745 aa17.21■□□□□ 0.35
TOP3B-211ENST00000449704 GTF2BQ00403 316 aa17.21■□□□□ 0.35
TOP3B-211ENST00000449704 COASYQ13057 564 aa17.21■□□□□ 0.35
TOP3B-211ENST00000449704 NOLC1Q14978 699 aaKnown RBP eCLIP17.21■□□□□ 0.35
TOP3B-211ENST00000449704 ZPBP2Q6X784 338 aa17.21■□□□□ 0.35
TOP3B-211ENST00000449704 CEP120Q8N960 986 aa17.21■□□□□ 0.35
TOP3B-211ENST00000449704 MRPL38Q96DV4 380 aaKnown RBP17.21■□□□□ 0.35
TOP3B-211ENST00000449704 PAGE5Q96GU1 130 aa17.21■□□□□ 0.35
TOP3B-211ENST00000449704 CCDC94Q9BW85 323 aaPredicted RBP17.21■□□□□ 0.35
TOP3B-211ENST00000449704 GOLPH3LQ9H4A5 285 aa17.21■□□□□ 0.35
TOP3B-211ENST00000449704 ST6GALNAC4Q9H4F1 302 aa17.21■□□□□ 0.35
TOP3B-211ENST00000449704 SPG21Q9NZD8 308 aa17.21■□□□□ 0.35
TOP3B-211ENST00000449704 DNAJB4Q9UDY4 337 aa17.21■□□□□ 0.35
TOP3B-211ENST00000449704 USP25Q9UHP3 1055 aa17.21■□□□□ 0.35
TOP3B-211ENST00000449704 ABLIM1O14639 778 aa17.2■□□□□ 0.34
TOP3B-211ENST00000449704 INPPL1O15357 1258 aa17.2■□□□□ 0.34
TOP3B-211ENST00000449704 CLDN3O15551 220 aa17.2■□□□□ 0.34
TOP3B-211ENST00000449704 DDHD2O94830 711 aa17.2■□□□□ 0.34
TOP3B-211ENST00000449704 GALTP07902 379 aa17.2■□□□□ 0.34
TOP3B-211ENST00000449704 PPM1AP35813 382 aa17.2■□□□□ 0.34
TOP3B-211ENST00000449704 KRT17Q04695 432 aa17.2■□□□□ 0.34
TOP3B-211ENST00000449704 CUL4BQ13620 913 aa17.2■□□□□ 0.34
TOP3B-211ENST00000449704 POF1BQ8WVV4 589 aa17.2■□□□□ 0.34
TOP3B-211ENST00000449704 KCNN1Q92952 543 aa17.2■□□□□ 0.34
TOP3B-211ENST00000449704 HPS3Q969F9 1004 aa17.2■□□□□ 0.34
TOP3B-211ENST00000449704 PCDHB13Q9Y5F0 798 aa17.2■□□□□ 0.34
TOP3B-211ENST00000449704 FAM237AA0A1B0GTK4 181 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms