RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 KLHL5Q96PQ7 755 aa15.23■□□□□ 0.03
PDLIM2-213ENST00000448520 MTRQ99707 1265 aa15.23■□□□□ 0.03
PDLIM2-213ENST00000448520 MINDY3Q9H8M7 445 aa15.23■□□□□ 0.03
PDLIM2-213ENST00000448520 SFXN1Q9H9B4 322 aa15.23■□□□□ 0.03
PDLIM2-213ENST00000448520 MRPL17Q9NRX2 175 aaKnown RBP15.23■□□□□ 0.03
PDLIM2-213ENST00000448520 LIMD1Q9UGP4 676 aa15.23■□□□□ 0.03
PDLIM2-213ENST00000448520 CDH22Q9UJ99 828 aa15.23■□□□□ 0.03
PDLIM2-213ENST00000448520 PCDHA12Q9UN75 941 aa15.23■□□□□ 0.03
PDLIM2-213ENST00000448520 SPDYE4A6NLX3 237 aa15.22■□□□□ 0.03
PDLIM2-213ENST00000448520 NRP1O14786 923 aa15.22■□□□□ 0.03
PDLIM2-213ENST00000448520 LILRB3O75022 631 aa15.22■□□□□ 0.03
PDLIM2-213ENST00000448520 LYPLA2O95372 231 aa15.22■□□□□ 0.03
PDLIM2-213ENST00000448520 YEATS4O95619 227 aa15.22■□□□□ 0.03
PDLIM2-213ENST00000448520 ITGA4P13612 1032 aa15.22■□□□□ 0.03
PDLIM2-213ENST00000448520 VCPP55072 806 aaKnown RBP15.22■□□□□ 0.03
PDLIM2-213ENST00000448520 PTENP60484 403 aa15.22■□□□□ 0.03
PDLIM2-213ENST00000448520 TFDP1Q14186 410 aa15.22■□□□□ 0.03
PDLIM2-213ENST00000448520 SLC39A14Q15043 492 aa15.22■□□□□ 0.03
PDLIM2-213ENST00000448520 NOTUMQ6P988 496 aa15.22■□□□□ 0.03
PDLIM2-213ENST00000448520 OTOP3Q7RTS5 596 aa15.22■□□□□ 0.03
PDLIM2-213ENST00000448520 GPR149Q86SP6 731 aa15.22■□□□□ 0.03
PDLIM2-213ENST00000448520 BCL7CQ8WUZ0 217 aaPredicted RBP15.22■□□□□ 0.03
PDLIM2-213ENST00000448520 SPATA32Q96LK8 384 aa15.22■□□□□ 0.03
PDLIM2-213ENST00000448520 CLIC6Q96NY7 704 aa15.22■□□□□ 0.03
PDLIM2-213ENST00000448520 ANKEF1Q9NU02 776 aa15.22■□□□□ 0.03
PDLIM2-213ENST00000448520 DPP7Q9UHL4 492 aa15.22■□□□□ 0.03
PDLIM2-213ENST00000448520 FBXO2Q9UK22 296 aaPredicted RBP15.22■□□□□ 0.03
PDLIM2-213ENST00000448520 RCOR1Q9UKL0 485 aa15.22■□□□□ 0.03
PDLIM2-213ENST00000448520 SPTLC2O15270 562 aa15.21■□□□□ 0.03
PDLIM2-213ENST00000448520 INPPL1O15357 1258 aa15.21■□□□□ 0.03
PDLIM2-213ENST00000448520 NR1I2O75469 434 aa15.21■□□□□ 0.03
PDLIM2-213ENST00000448520 POMCP01189 267 aa15.21■□□□□ 0.03
PDLIM2-213ENST00000448520 SOD2P04179 222 aa15.21■□□□□ 0.03
PDLIM2-213ENST00000448520 CNPP09543 421 aaKnown RBP15.21■□□□□ 0.03
PDLIM2-213ENST00000448520 WEE2P0C1S8 567 aa15.21■□□□□ 0.03
PDLIM2-213ENST00000448520 XRCC6P12956 609 aaKnown RBP eCLIP15.21■□□□□ 0.03
PDLIM2-213ENST00000448520 CLCN4P51793 760 aa15.21■□□□□ 0.03
PDLIM2-213ENST00000448520 SPIRE1Q08AE8 756 aa15.21■□□□□ 0.03
PDLIM2-213ENST00000448520 ORC2Q13416 577 aaPredicted RBP15.21■□□□□ 0.03
PDLIM2-213ENST00000448520 CTTNQ14247 550 aaKnown RBP15.21■□□□□ 0.03
PDLIM2-213ENST00000448520 SPECC1Q5M775 1068 aa15.21■□□□□ 0.03
PDLIM2-213ENST00000448520 ATL3Q6DD88 541 aa15.21■□□□□ 0.03
PDLIM2-213ENST00000448520 ELMSAN1Q6PJG2 1045 aa15.21■□□□□ 0.03
PDLIM2-213ENST00000448520 TMC5Q6UXY8 1006 aa15.21■□□□□ 0.03
PDLIM2-213ENST00000448520 CYP26C1Q6V0L0 522 aa15.21■□□□□ 0.03
PDLIM2-213ENST00000448520 C15orf39Q6ZRI6 1047 aa15.21■□□□□ 0.03
PDLIM2-213ENST00000448520 IFNLR1Q8IU57 520 aaPredicted RBP15.21■□□□□ 0.03
PDLIM2-213ENST00000448520 HACE1Q8IYU2 909 aa15.21■□□□□ 0.03
PDLIM2-213ENST00000448520 HSD17B14Q9BPX1 270 aa15.21■□□□□ 0.03
PDLIM2-213ENST00000448520 EIF2AK1Q9BQI3 630 aaKnown RBP15.21■□□□□ 0.03
PDLIM2-213ENST00000448520 VN1R3Q9BXE9 311 aa15.21■□□□□ 0.03
PDLIM2-213ENST00000448520 CFAP45Q9UL16 551 aa15.21■□□□□ 0.03
PDLIM2-213ENST00000448520 KMT2EQ8IZD2 1858 aa15.2■□□□□ 0.02
PDLIM2-213ENST00000448520 VWA3AA6NCI4 1184 aa15.2■□□□□ 0.02
PDLIM2-213ENST00000448520 POTEMA6NI47 508 aa15.2■□□□□ 0.02
PDLIM2-213ENST00000448520 PP2D1A8MPX8 630 aa15.2■□□□□ 0.02
PDLIM2-213ENST00000448520 ZBTB39O15060 712 aa15.2■□□□□ 0.02
PDLIM2-213ENST00000448520 DGAT1O75907 488 aa15.2■□□□□ 0.02
PDLIM2-213ENST00000448520 C1RP00736 705 aa15.2■□□□□ 0.02
PDLIM2-213ENST00000448520 URODP06132 367 aa15.2■□□□□ 0.02
PDLIM2-213ENST00000448520 AFF1P51825 1210 aaKnown RBP15.2■□□□□ 0.02
PDLIM2-213ENST00000448520 CYP4A11Q02928 519 aa15.2■□□□□ 0.02
PDLIM2-213ENST00000448520 KANK3Q6NY19 840 aa15.2■□□□□ 0.02
PDLIM2-213ENST00000448520 CCDC149Q6ZUS6 474 aa15.2■□□□□ 0.02
PDLIM2-213ENST00000448520 COLGALT2Q8IYK4 626 aa15.2■□□□□ 0.02
PDLIM2-213ENST00000448520 SMG8Q8ND04 991 aaKnown RBP15.2■□□□□ 0.02
PDLIM2-213ENST00000448520 CMASQ8NFW8 434 aaPredicted RBP15.2■□□□□ 0.02
PDLIM2-213ENST00000448520 ATOH1Q92858 354 aaPredicted RBP15.2■□□□□ 0.02
PDLIM2-213ENST00000448520 PHOX2BQ99453 314 aa15.2■□□□□ 0.02
PDLIM2-213ENST00000448520 NFKBIZQ9BYH8 718 aa15.2■□□□□ 0.02
PDLIM2-213ENST00000448520 CSRNP2Q9H175 543 aa15.2■□□□□ 0.02
PDLIM2-213ENST00000448520 TTC12Q9H892 705 aaPredicted RBP15.2■□□□□ 0.02
PDLIM2-213ENST00000448520 GIT1Q9Y2X7 761 aa15.2■□□□□ 0.02
PDLIM2-213ENST00000448520 IPPQ9Y573 584 aa15.2■□□□□ 0.02
PDLIM2-213ENST00000448520 ARL5CA6NH57 179 aa15.19■□□□□ 0.02
PDLIM2-213ENST00000448520 INO80B-WBP1J3KQ70 363 aa15.19■□□□□ 0.02
PDLIM2-213ENST00000448520 GALR2O43603 387 aaPredicted RBP15.19■□□□□ 0.02
PDLIM2-213ENST00000448520 B4GALT3O60512 393 aa15.19■□□□□ 0.02
PDLIM2-213ENST00000448520 TSPAN1O60635 241 aa15.19■□□□□ 0.02
PDLIM2-213ENST00000448520 BMP15O95972 392 aa15.19■□□□□ 0.02
PDLIM2-213ENST00000448520 PDGFBP01127 241 aaPredicted RBP15.19■□□□□ 0.02
PDLIM2-213ENST00000448520 SSBP05455 408 aaKnown RBP eCLIP15.19■□□□□ 0.02
PDLIM2-213ENST00000448520 ASGR2P07307 311 aa15.19■□□□□ 0.02
PDLIM2-213ENST00000448520 ADH1AP07327 375 aa15.19■□□□□ 0.02
PDLIM2-213ENST00000448520 OR1G1P47890 313 aa15.19■□□□□ 0.02
PDLIM2-213ENST00000448520 ME1P48163 572 aa15.19■□□□□ 0.02
PDLIM2-213ENST00000448520 CLCN5P51795 746 aa15.19■□□□□ 0.02
PDLIM2-213ENST00000448520 GPR65Q8IYL9 337 aa15.19■□□□□ 0.02
PDLIM2-213ENST00000448520 HDAC7Q8WUI4 952 aa15.19■□□□□ 0.02
PDLIM2-213ENST00000448520 RPS6KC1Q96S38 1066 aa15.19■□□□□ 0.02
PDLIM2-213ENST00000448520 GAD1Q99259 594 aa15.19■□□□□ 0.02
PDLIM2-213ENST00000448520 COLEC11Q9BWP8 271 aa15.19■□□□□ 0.02
PDLIM2-213ENST00000448520 RHOBTB2Q9BYZ6 727 aa15.19■□□□□ 0.02
PDLIM2-213ENST00000448520 TRIM6Q9C030 488 aaPredicted RBP15.19■□□□□ 0.02
PDLIM2-213ENST00000448520 XPNPEP1Q9NQW7 623 aa15.19■□□□□ 0.02
PDLIM2-213ENST00000448520 BMP2KQ9NSY1 1161 aaPredicted RBP15.19■□□□□ 0.02
PDLIM2-213ENST00000448520 PCDHA7Q9UN72 937 aa15.19■□□□□ 0.02
PDLIM2-213ENST00000448520 PPP6R2O75170 966 aa15.18■□□□□ 0.02
PDLIM2-213ENST00000448520 GADD45BO75293 160 aaPredicted RBP15.18■□□□□ 0.02
PDLIM2-213ENST00000448520 CDC25AP30304 524 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms