RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 MAP3K13O43283 966 aa14.33□□□□□ -0.11
ERGIC3-209ENST00000447986 ATF7P17544 494 aaPredicted RBP14.33□□□□□ -0.11
ERGIC3-209ENST00000447986 PAN2Q504Q3 1202 aaKnown RBP14.33□□□□□ -0.11
ERGIC3-209ENST00000447986 ZC2HC1CQ53FD0 456 aaPredicted RBP14.33□□□□□ -0.11
ERGIC3-209ENST00000447986 FAM26FQ5R3K3 315 aa14.33□□□□□ -0.11
ERGIC3-209ENST00000447986 MPZL3Q6UWV2 235 aa14.33□□□□□ -0.11
ERGIC3-209ENST00000447986 MAP4K3Q8IVH8 894 aa14.33□□□□□ -0.11
ERGIC3-209ENST00000447986 EFCAB3Q8N7B9 438 aa14.33□□□□□ -0.11
ERGIC3-209ENST00000447986 SMG8Q8ND04 991 aaKnown RBP14.33□□□□□ -0.11
ERGIC3-209ENST00000447986 ENGASEQ8NFI3 743 aa14.33□□□□□ -0.11
ERGIC3-209ENST00000447986 URGCPQ8TCY9 931 aa14.33□□□□□ -0.11
ERGIC3-209ENST00000447986 ZNF576Q9H609 170 aa14.33□□□□□ -0.11
ERGIC3-209ENST00000447986 TMEM206Q9H813 350 aa14.33□□□□□ -0.11
ERGIC3-209ENST00000447986 RC3H2Q9HBD1 1191 aaKnown RBP14.33□□□□□ -0.11
ERGIC3-209ENST00000447986 ANKFY1Q9P2R3 1169 aa14.33□□□□□ -0.11
ERGIC3-209ENST00000447986 USP20Q9Y2K6 914 aa14.33□□□□□ -0.11
ERGIC3-209ENST00000447986 COL4A6Q14031 1691 aa14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 LINC01553A4QN01 128 aa14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 GADD45BO75293 160 aaPredicted RBP14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 NR1I2O75469 434 aa14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 PIGRP01833 764 aa14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 EDN1P05305 212 aa14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 MCF2P10911 925 aa14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 CASP1P29466 404 aa14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 PSMD2Q13200 908 aa14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 SNW1Q13573 536 aaKnown RBP14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 POSTNQ15063 836 aa14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 SPOUT1Q5T280 376 aaKnown RBP14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 L1TD1Q5T7N2 865 aaKnown RBP14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 SYCP3Q8IZU3 236 aa14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 LRRC43Q8N309 656 aa14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 HELQQ8TDG4 1101 aa14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 LPPQ93052 612 aa14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 ACCSQ96QU6 501 aa14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 TGS1Q96RS0 853 aaKnown RBP14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 APOL6Q9BWW8 343 aa14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 NXF3Q9H4D5 531 aaKnown RBP14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 AAASQ9NRG9 546 aa14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 KANSL3Q9P2N6 904 aa14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 PARP2Q9UGN5 583 aa14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 GIT1Q9Y2X7 761 aa14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 TRIOBPQ9H2D6 2365 aa14.33□□□□□ -0.12
ERGIC3-209ENST00000447986 PTPRSQ13332 1948 aa14.32□□□□□ -0.12
ERGIC3-209ENST00000447986 RANBP2P49792 3224 aaKnown RBP14.32□□□□□ -0.12
ERGIC3-209ENST00000447986 EIF3DO15371 548 aaKnown RBP eCLIP14.32□□□□□ -0.12
ERGIC3-209ENST00000447986 PPP1R37O75864 691 aa14.32□□□□□ -0.12
ERGIC3-209ENST00000447986 RPN1P04843 607 aaKnown RBP14.32□□□□□ -0.12
ERGIC3-209ENST00000447986 YARSP54577 528 aaKnown RBP14.32□□□□□ -0.12
ERGIC3-209ENST00000447986 TAP1Q03518 808 aa14.32□□□□□ -0.12
ERGIC3-209ENST00000447986 NOLC1Q14978 699 aaKnown RBP eCLIP14.32□□□□□ -0.12
ERGIC3-209ENST00000447986 KYAT1Q16773 422 aa14.32□□□□□ -0.12
ERGIC3-209ENST00000447986 CLLU1OSQ5K130 101 aa14.32□□□□□ -0.12
ERGIC3-209ENST00000447986 EEF1DP3Q658K8 133 aa14.32□□□□□ -0.12
ERGIC3-209ENST00000447986 SLFN12LQ6IEE8 588 aa14.32□□□□□ -0.12
ERGIC3-209ENST00000447986 ZBTB33Q86T24 672 aa14.32□□□□□ -0.12
ERGIC3-209ENST00000447986 RPS6KC1Q96S38 1066 aa14.32□□□□□ -0.12
ERGIC3-209ENST00000447986 CCDC94Q9BW85 323 aaPredicted RBP14.32□□□□□ -0.12
ERGIC3-209ENST00000447986 PTPRHQ9HD43 1115 aa14.32□□□□□ -0.12
ERGIC3-209ENST00000447986 TOPORSQ9NS56 1045 aaPredicted RBP14.32□□□□□ -0.12
ERGIC3-209ENST00000447986 INPP5FQ9Y2H2 1132 aa14.32□□□□□ -0.12
ERGIC3-209ENST00000447986 HES2Q9Y543 173 aa14.32□□□□□ -0.12
ERGIC3-209ENST00000447986 CARNS1A5YM72 827 aa14.31□□□□□ -0.12
ERGIC3-209ENST00000447986 KIF20AO95235 890 aa14.31□□□□□ -0.12
ERGIC3-209ENST00000447986 SMC2O95347 1197 aa14.31□□□□□ -0.12
ERGIC3-209ENST00000447986 MYBP10242 640 aa14.31□□□□□ -0.12
ERGIC3-209ENST00000447986 PROZP22891 400 aa14.31□□□□□ -0.12
ERGIC3-209ENST00000447986 GATMP50440 423 aa14.31□□□□□ -0.12
ERGIC3-209ENST00000447986 RNASELQ05823 741 aaKnown RBP14.31□□□□□ -0.12
ERGIC3-209ENST00000447986 MCL1Q07820 350 aa14.31□□□□□ -0.12
ERGIC3-209ENST00000447986 DPYDQ12882 1025 aa14.31□□□□□ -0.12
ERGIC3-209ENST00000447986 KMT5BQ4FZB7 885 aa14.31□□□□□ -0.12
ERGIC3-209ENST00000447986 NOMO2Q5JPE7 1267 aa14.31□□□□□ -0.12
ERGIC3-209ENST00000447986 AGMOQ6ZNB7 445 aa14.31□□□□□ -0.12
ERGIC3-209ENST00000447986 ELOA2Q8IYF1 753 aaPredicted RBP14.31□□□□□ -0.12
ERGIC3-209ENST00000447986 CASD1Q96PB1 797 aa14.31□□□□□ -0.12
ERGIC3-209ENST00000447986 STRA6Q9BX79 667 aa14.31□□□□□ -0.12
ERGIC3-209ENST00000447986 CDT1Q9H211 546 aa14.31□□□□□ -0.12
ERGIC3-209ENST00000447986 RMND1Q9NWS8 449 aa14.31□□□□□ -0.12
ERGIC3-209ENST00000447986 ZMYM2Q9UBW7 1377 aa14.31□□□□□ -0.12
ERGIC3-209ENST00000447986 UBE4BO95155 1302 aa14.31□□□□□ -0.12
ERGIC3-209ENST00000447986 OFD1O75665 1012 aa14.3□□□□□ -0.12
ERGIC3-209ENST00000447986 HARSP12081 509 aaKnown RBP14.3□□□□□ -0.12
ERGIC3-209ENST00000447986 AKAP5P24588 427 aa14.3□□□□□ -0.12
ERGIC3-209ENST00000447986 MLH1P40692 756 aa14.3□□□□□ -0.12
ERGIC3-209ENST00000447986 GRM5P41594 1212 aa14.3□□□□□ -0.12
ERGIC3-209ENST00000447986 CASP5P51878 434 aa14.3□□□□□ -0.12
ERGIC3-209ENST00000447986 EHHADHQ08426 723 aa14.3□□□□□ -0.12
ERGIC3-209ENST00000447986 KIF12Q96FN5 646 aa14.3□□□□□ -0.12
ERGIC3-209ENST00000447986 FAM193BQ96PV7 902 aaPredicted RBP14.3□□□□□ -0.12
ERGIC3-209ENST00000447986 SEMA6BQ9H3T3 888 aa14.3□□□□□ -0.12
ERGIC3-209ENST00000447986 SLC39A2Q9NP94 309 aa14.3□□□□□ -0.12
ERGIC3-209ENST00000447986 RNF19AQ9NV58 838 aa14.3□□□□□ -0.12
ERGIC3-209ENST00000447986 SNTG2Q9NY99 539 aa14.3□□□□□ -0.12
ERGIC3-209ENST00000447986 GDAQ9Y2T3 454 aa14.3□□□□□ -0.12
ERGIC3-209ENST00000447986 MRPL42Q9Y6G3 142 aaKnown RBP14.3□□□□□ -0.12
ERGIC3-209ENST00000447986 ARL5CA6NH57 179 aa14.3□□□□□ -0.12
ERGIC3-209ENST00000447986 MEIS3P2A8K0S8 358 aa14.3□□□□□ -0.12
ERGIC3-209ENST00000447986 KLRC4O43908 158 aa14.3□□□□□ -0.12
ERGIC3-209ENST00000447986 PRPF6O94906 941 aaKnown RBP14.3□□□□□ -0.12
ERGIC3-209ENST00000447986 LAG3P18627 525 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms