RNA–Protein interactions for RNA: ENST00000447079.4

CDK12-202, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK12, Length 8,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-202ENST00000447079 NUP85Q9BW27 656 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 SLITRK6Q9H5Y7 841 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 MRGBPQ9NV56 204 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 ERAP1Q9NZ08 941 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 CAPN11Q9UMQ6 739 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 GDAQ9Y2T3 454 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 SPEF2Q9C093 1822 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 H3BRJ5 948 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 RASGRF2O14827 1237 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 DHX9Q08211 1270 aaKnown RBP7.47□□□□□ -1.21
CDK12-202ENST00000447079 SNX17Q15036 470 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 SCYL3Q8IZE3 742 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 PDLIM2Q96JY6 352 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 STK33Q9BYT3 514 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.47□□□□□ -1.21
CDK12-202ENST00000447079 FAM187AA6NFU0 413 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 TNPO2O14787 897 aaKnown RBP7.47□□□□□ -1.21
CDK12-202ENST00000447079 NDUFB10O96000 172 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 GTF2A2P52657 109 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 HMGCS2P54868 508 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 NAA35Q5VZE5 725 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 RWDD4Q6NW29 188 aaKnown RBP7.47□□□□□ -1.21
CDK12-202ENST00000447079 HAUS6Q7Z4H7 955 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 ACRBPQ8NEB7 543 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 ZNF564Q8TBZ8 553 aaPredicted RBP7.47□□□□□ -1.21
CDK12-202ENST00000447079 HSPH1Q92598 858 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 ATP6V1E2Q96A05 226 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 FAM129AQ9BZQ8 928 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 YIPF3Q9GZM5 350 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 ZNF212Q9UDV6 495 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 SNAP25P60880 206 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 NFX1Q12986 1120 aaKnown RBP7.47□□□□□ -1.21
CDK12-202ENST00000447079 EEF2KMTQ96G04 330 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 MKNK1Q9BUB5 465 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 TRIM33Q9UPN9 1127 aa7.47□□□□□ -1.21
CDK12-202ENST00000447079 ATP5HO75947 161 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 FGGP02679 453 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 FKBP1AP62942 108 aaKnown RBP7.46□□□□□ -1.21
CDK12-202ENST00000447079 RBP5P82980 135 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 DGKDQ16760 1214 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 CC2D1AQ6P1N0 951 aaPredicted RBP7.46□□□□□ -1.21
CDK12-202ENST00000447079 GPRC5AQ8NFJ5 357 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 SCFD2Q8WU76 684 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 RFFLQ8WZ73 363 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 FAF2Q96CS3 445 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 MED15Q96RN5 788 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 NGRNQ9NPE2 291 aaKnown RBP7.46□□□□□ -1.21
CDK12-202ENST00000447079 KLHL8Q9P2G9 620 aaPredicted RBP7.46□□□□□ -1.21
CDK12-202ENST00000447079 ADAMTS1Q9UHI8 967 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 SALL1Q9NSC2 1324 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 SIGLEC1Q9BZZ2 1709 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 GOLGA8IPA6NC78 632 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 GOLGA8JA6NMD2 632 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 DCTN3O75935 186 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 TXNP10599 105 aaKnown RBP7.46□□□□□ -1.21
CDK12-202ENST00000447079 GCLMP48507 274 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 C2orf54Q08AI8 447 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 THNSL1Q8IYQ7 743 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 IFT43Q96FT9 208 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 POLR3CQ9BUI4 534 aaPredicted RBP7.46□□□□□ -1.21
CDK12-202ENST00000447079 TSSK1BQ9BXA7 367 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 ZWILCHQ9H900 591 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 SUCLA2Q9P2R7 463 aaPredicted RBP7.46□□□□□ -1.21
CDK12-202ENST00000447079 KIF13AQ9H1H9 1805 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 TARSL2A2RTX5 802 aaKnown RBP7.46□□□□□ -1.21
CDK12-202ENST00000447079 RASSF10A6NK89 507 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 ENC1O14682 589 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 PALMO75781 387 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 TMCC1O94876 653 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 SAT1P21673 171 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 DYNLT1P63172 113 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 SNX1Q13596 522 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 SCARF1Q14162 830 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 TMED2Q15363 201 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 ANKRD13CQ8N6S4 541 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.46□□□□□ -1.218e-11■□□□□ 9.3
CDK12-202ENST00000447079 PRMT7Q9NVM4 692 aaPredicted RBP7.46□□□□□ -1.21
CDK12-202ENST00000447079 TMEM51Q9NW97 253 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 FBXO2Q9UK22 296 aaPredicted RBP7.46□□□□□ -1.21
CDK12-202ENST00000447079 PAIP2BQ9ULR5 123 aaKnown RBP7.46□□□□□ -1.21
CDK12-202ENST00000447079 SYNPO2Q9UMS6 1093 aa7.46□□□□□ -1.21
CDK12-202ENST00000447079 LMO7Q8WWI1 1683 aa7.46□□□□□ -1.22
CDK12-202ENST00000447079 LRRC53A6NM62 1247 aa7.46□□□□□ -1.22
CDK12-202ENST00000447079 ACADSBP45954 432 aa7.46□□□□□ -1.22
CDK12-202ENST00000447079 PSMD7P51665 324 aa7.46□□□□□ -1.22
CDK12-202ENST00000447079 DCAF4L1Q3SXM0 396 aa7.46□□□□□ -1.22
CDK12-202ENST00000447079 EP400NLQ6ZTU2 488 aa7.46□□□□□ -1.22
CDK12-202ENST00000447079 GPIHBP1Q8IV16 184 aa7.46□□□□□ -1.22
CDK12-202ENST00000447079 GPRASP2Q96D09 838 aa7.46□□□□□ -1.22
CDK12-202ENST00000447079 TRIM9Q9C026 710 aa7.46□□□□□ -1.22
CDK12-202ENST00000447079 INTS2Q9H0H0 1204 aaKnown RBP7.46□□□□□ -1.22
CDK12-202ENST00000447079 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.46□□□□□ -1.22
CDK12-202ENST00000447079 KPNA7A9QM74 516 aa7.46□□□□□ -1.22
CDK12-202ENST00000447079 RHOBTB3O94955 611 aa7.46□□□□□ -1.22
CDK12-202ENST00000447079 FTCDO95954 541 aa7.46□□□□□ -1.22
CDK12-202ENST00000447079 CHRNA5P30532 468 aa7.46□□□□□ -1.22
CDK12-202ENST00000447079 PCYT1AP49585 367 aa7.46□□□□□ -1.22
CDK12-202ENST00000447079 PPARDQ03181 441 aa7.46□□□□□ -1.22
CDK12-202ENST00000447079 DRAP1Q14919 205 aaPredicted RBP7.46□□□□□ -1.22
CDK12-202ENST00000447079 TRAPPC11Q7Z392 1133 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms