RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 PRPF31Q8WWY3 499 aaKnown RBP3.06□□□□□ -1.92
LINC00393-201ENST00000443621 POMGNT1Q8WZA1 660 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 SHC3Q92529 594 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 RABGGTAQ92696 567 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 KAT6AQ92794 2004 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 GLG1Q92896 1179 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 HPS3Q969F9 1004 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 GJA10Q969M2 543 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 C16orf45Q96MC5 204 aaPredicted RBP3.06□□□□□ -1.92
LINC00393-201ENST00000443621 PCMTD1Q96MG8 357 aaPredicted RBP3.06□□□□□ -1.92
LINC00393-201ENST00000443621 SPATA33Q96N06 139 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 NOX5Q96PH1 765 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 FNBP1Q96RU3 617 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 RPS6KC1Q96S38 1066 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 PCYT2Q99447 389 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 CHP1Q99653 195 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 NAPGQ99747 312 aaPredicted RBP3.06□□□□□ -1.92
LINC00393-201ENST00000443621 APBA2Q99767 749 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 ACO2Q99798 780 aaKnown RBP3.06□□□□□ -1.92
LINC00393-201ENST00000443621 PTPN18Q99952 460 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 NCAPGQ9BPX3 1015 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 C16orf70Q9BSU1 422 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 PAGR1Q9BTK6 254 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 PLVAPQ9BX97 442 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 IFIH1Q9BYX4 1025 aaKnown RBP3.06□□□□□ -1.92
LINC00393-201ENST00000443621 FAM129AQ9BZQ8 928 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 IMPG2Q9BZV3 1241 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 MIS12Q9H081 205 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 DEF6Q9H4E7 631 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 ZHX3Q9H4I2 956 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 RRAGCQ9HB90 399 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 SPC25Q9HBM1 224 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 CYLDQ9NQC7 956 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 CHST12Q9NRB3 414 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 ARGLU1Q9NWB6 273 aaPredicted RBP3.06□□□□□ -1.92
LINC00393-201ENST00000443621 RNF216Q9NWF9 866 aaPredicted RBP3.06□□□□□ -1.92
LINC00393-201ENST00000443621 RAB20Q9NX57 234 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.06□□□□□ -1.92
LINC00393-201ENST00000443621 GCNT4Q9P109 453 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 CNTNAP2Q9UHC6 1331 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 SEPT9Q9UHD8 586 aaPredicted RBP3.06□□□□□ -1.92
LINC00393-201ENST00000443621 CDC23Q9UJX2 597 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 NAGPAQ9UK23 515 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 CPSF3Q9UKF6 684 aaKnown RBP3.06□□□□□ -1.92
LINC00393-201ENST00000443621 GJD2Q9UKL4 321 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 AGO2Q9UKV8 859 aaKnown RBP3.06□□□□□ -1.92
LINC00393-201ENST00000443621 TTC7AQ9ULT0 858 aaPredicted RBP3.06□□□□□ -1.92
LINC00393-201ENST00000443621 GNEQ9Y223 722 aaKnown RBP3.06□□□□□ -1.92
LINC00393-201ENST00000443621 PCDHB2Q9Y5E7 798 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 PCDHA13Q9Y5I0 950 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 SAR1BQ9Y6B6 198 aa3.06□□□□□ -1.92
LINC00393-201ENST00000443621 RALGAPA2Q2PPJ7 1873 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 MROH7Q68CQ1 1323 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.05□□□□□ -1.92
LINC00393-201ENST00000443621 NPHP3-ACAD11A0A0J9YXS1 232 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 CCDC151A5D8V7 595 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 SOWAHDA6NJG2 315 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 TMEM88BA6NKF7 163 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 SFI1A8K8P3 1242 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 FAM155AB1AL88 458 aaPredicted RBP3.05□□□□□ -1.92
LINC00393-201ENST00000443621 CCDC188H7C350 402 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 RNF225M0QZC1 329 aaPredicted RBP3.05□□□□□ -1.92
LINC00393-201ENST00000443621 DDX39AO00148 427 aaKnown RBP3.05□□□□□ -1.92
LINC00393-201ENST00000443621 RIOK3O14730 519 aaKnown RBP3.05□□□□□ -1.92
LINC00393-201ENST00000443621 ZBTB39O15060 712 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 CLIC2O15247 247 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 SLC16A4O15374 487 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 FAM189A1O60320 539 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 EVI5O60447 810 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 COBLO75128 1261 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 RTN2O75298 545 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 ZNF189O75820 626 aaPredicted RBP3.05□□□□□ -1.92
LINC00393-201ENST00000443621 KIF4AO95239 1232 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 ARIH2O95376 493 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 PARNO95453 639 aaKnown RBP3.05□□□□□ -1.92
LINC00393-201ENST00000443621 C22orf31O95567 290 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 LSM8O95777 96 aaKnown RBP3.05□□□□□ -1.92
LINC00393-201ENST00000443621 ASS1P00966 412 aaKnown RBP3.05□□□□□ -1.92
LINC00393-201ENST00000443621 LGALS2P05162 132 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 MMP3P08254 477 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 CLTAP09496 248 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 H2AFZP0C0S5 128 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 ZNF865P0CJ78 1059 aaPredicted RBP3.05□□□□□ -1.92
LINC00393-201ENST00000443621 SKIP12755 728 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 P4HA1P13674 534 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 AKR1A1P14550 325 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 INSRRP14616 1297 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 SLC9A1P19634 815 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 EIF4BP23588 611 aaKnown RBP3.05□□□□□ -1.92
LINC00393-201ENST00000443621 GBP1P32455 592 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 CDH5P33151 784 aaPredicted RBP3.05□□□□□ -1.92
LINC00393-201ENST00000443621 EIF4A3P38919 411 aaKnown RBP3.05□□□□□ -1.92
LINC00393-201ENST00000443621 SLC1A1P43005 524 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 MAGEA1P43355 309 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 CASP4P49662 377 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 ZNF157P51786 506 aaPredicted RBP3.05□□□□□ -1.92
LINC00393-201ENST00000443621 FCGRTP55899 365 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 SNX16P57768 344 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 GJA9P57773 515 aa3.05□□□□□ -1.92
LINC00393-201ENST00000443621 POLR2FP61218 127 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms