RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 AGMOQ6ZNB7 445 aa11.88□□□□□ -0.51
HDAC6-211ENST00000443563 ZNF720Q7Z2F6 126 aa11.88□□□□□ -0.51
HDAC6-211ENST00000443563 CDR2LQ86X02 465 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-211ENST00000443563 SFR1Q86XK3 245 aa11.88□□□□□ -0.51
HDAC6-211ENST00000443563 STAMQ92783 540 aa11.88□□□□□ -0.51
HDAC6-211ENST00000443563 IPO9Q96P70 1041 aaKnown RBP11.88□□□□□ -0.51
HDAC6-211ENST00000443563 FAM193BQ96PV7 902 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-211ENST00000443563 TARS2Q9BW92 718 aaKnown RBP11.88□□□□□ -0.51
HDAC6-211ENST00000443563 TYW1Q9NV66 732 aaKnown RBP11.88□□□□□ -0.51
HDAC6-211ENST00000443563 PARP2Q9UGN5 583 aa11.88□□□□□ -0.51
HDAC6-211ENST00000443563 SERTAD1Q9UHV2 236 aa11.88□□□□□ -0.51
HDAC6-211ENST00000443563 MTUS1Q9ULD2 1270 aa11.88□□□□□ -0.51
HDAC6-211ENST00000443563 EXOC7Q9UPT5 735 aa11.88□□□□□ -0.51
HDAC6-211ENST00000443563 STXBP5LQ9Y2K9 1186 aa11.88□□□□□ -0.51
HDAC6-211ENST00000443563 EYSQ5T1H1 3165 aa11.88□□□□□ -0.51
HDAC6-211ENST00000443563 COL6A3P12111 3177 aa11.87□□□□□ -0.51
HDAC6-211ENST00000443563 PVALEFA0A1B0GWK0 134 aa11.87□□□□□ -0.51
HDAC6-211ENST00000443563 ARL5CA6NH57 179 aa11.87□□□□□ -0.51
HDAC6-211ENST00000443563 TTLL13PA6NNM8 815 aa11.87□□□□□ -0.51
HDAC6-211ENST00000443563 HNRNPDLO14979 420 aaKnown RBP11.87□□□□□ -0.51
HDAC6-211ENST00000443563 INPPL1O15357 1258 aa11.87□□□□□ -0.51
HDAC6-211ENST00000443563 CLDN3O15551 220 aa11.87□□□□□ -0.51
HDAC6-211ENST00000443563 ACTN4O43707 911 aaKnown RBP11.87□□□□□ -0.51
HDAC6-211ENST00000443563 GCNT3O95395 438 aa11.87□□□□□ -0.51
HDAC6-211ENST00000443563 PIGRP01833 764 aa11.87□□□□□ -0.51
HDAC6-211ENST00000443563 EDN1P05305 212 aa11.87□□□□□ -0.51
HDAC6-211ENST00000443563 POU3F3P20264 500 aaPredicted RBP11.87□□□□□ -0.51
HDAC6-211ENST00000443563 PROZP22891 400 aa11.87□□□□□ -0.51
HDAC6-211ENST00000443563 NMT1P30419 496 aaKnown RBP11.87□□□□□ -0.51
HDAC6-211ENST00000443563 MATR3P43243 847 aaKnown RBP eCLIP11.87□□□□□ -0.51
HDAC6-211ENST00000443563 AFMP43652 599 aa11.87□□□□□ -0.51
HDAC6-211ENST00000443563 ALDH7A1P49419 539 aaKnown RBP11.87□□□□□ -0.51
HDAC6-211ENST00000443563 LIG4P49917 911 aa11.87□□□□□ -0.51
HDAC6-211ENST00000443563 YARSP54577 528 aaKnown RBP11.87□□□□□ -0.51
HDAC6-211ENST00000443563 GPM6BQ13491 265 aa11.87□□□□□ -0.51
HDAC6-211ENST00000443563 UNC13DQ70J99 1090 aa11.87□□□□□ -0.51
HDAC6-211ENST00000443563 MAP4K3Q8IVH8 894 aa11.87□□□□□ -0.51
HDAC6-211ENST00000443563 MYLIPQ8WY64 445 aa11.87□□□□□ -0.51
HDAC6-211ENST00000443563 CCDC47Q96A33 483 aaKnown RBP11.87□□□□□ -0.51
HDAC6-211ENST00000443563 ZNF558Q96NG5 402 aa11.87□□□□□ -0.51
HDAC6-211ENST00000443563 ACCSQ96QU6 501 aa11.87□□□□□ -0.51
HDAC6-211ENST00000443563 RPS6KC1Q96S38 1066 aa11.87□□□□□ -0.51
HDAC6-211ENST00000443563 FIZ1Q96SL8 496 aa11.87□□□□□ -0.51
HDAC6-211ENST00000443563 CCDC94Q9BW85 323 aaPredicted RBP11.87□□□□□ -0.51
HDAC6-211ENST00000443563 APOL6Q9BWW8 343 aa11.87□□□□□ -0.51
HDAC6-211ENST00000443563 LMAN2LQ9H0V9 348 aa11.87□□□□□ -0.51
HDAC6-211ENST00000443563 NXF3Q9H4D5 531 aaKnown RBP11.87□□□□□ -0.51
HDAC6-211ENST00000443563 CWH43Q9H720 699 aa11.87□□□□□ -0.51
HDAC6-211ENST00000443563 PTPRHQ9HD43 1115 aa11.87□□□□□ -0.51
HDAC6-211ENST00000443563 TOPORSQ9NS56 1045 aaPredicted RBP11.87□□□□□ -0.51
HDAC6-211ENST00000443563 INPP5FQ9Y2H2 1132 aa11.87□□□□□ -0.51
HDAC6-211ENST00000443563 MEIS3P2A8K0S8 358 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 NR1I2O75469 434 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 ZNF202O95125 648 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 LINC00271P0C7V0 271 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 IGFBP4P22692 258 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 AKAP5P24588 427 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 MLH1P40692 756 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 GRM5P41594 1212 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 UBE3AQ05086 875 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 MCL1Q07820 350 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 COASYQ13057 564 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 NOLC1Q14978 699 aaKnown RBP eCLIP11.86□□□□□ -0.51
HDAC6-211ENST00000443563 TPRNQ4KMQ1 711 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 L1TD1Q5T7N2 865 aaKnown RBP11.86□□□□□ -0.51
HDAC6-211ENST00000443563 EEF1DP3Q658K8 133 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 SLFN12LQ6IEE8 588 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 KCNT2Q6UVM3 1135 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 LRRC55Q6ZSA7 311 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 COLGALT1Q8NBJ5 622 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 GDPD5Q8WTR4 605 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 PAGE5Q96GU1 130 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 CDT1Q9H211 546 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 TMEM206Q9H813 350 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 TSHZ2Q9NRE2 1034 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 TBC1D13Q9NVG8 400 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 SNTG2Q9NY99 539 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 ANKFY1Q9P2R3 1169 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 STK39Q9UEW8 545 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 HOOK1Q9UJC3 728 aaKnown RBP11.86□□□□□ -0.51
HDAC6-211ENST00000443563 USP20Q9Y2K6 914 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 HES2Q9Y543 173 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 CITO14578 2027 aa11.86□□□□□ -0.51
HDAC6-211ENST00000443563 PLXNA4Q9HCM2 1894 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 EPOPA6NHQ4 379 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 EIF3DO15371 548 aaKnown RBP eCLIP11.85□□□□□ -0.51
HDAC6-211ENST00000443563 ZC3H11AO75152 810 aaKnown RBP eCLIP11.85□□□□□ -0.51
HDAC6-211ENST00000443563 PPP1R37O75864 691 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 RECQL4O94761 1208 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 POMCP01189 267 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 KRT17Q04695 432 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 FAM160A1Q05DH4 1040 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 GRIK3Q13003 919 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 PSMD2Q13200 908 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 CUL4BQ13620 913 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 POSTNQ15063 836 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 ZC2HC1CQ53FD0 456 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-211ENST00000443563 FAM26FQ5R3K3 315 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 KRBA2Q6ZNG9 492 aa11.85□□□□□ -0.51
HDAC6-211ENST00000443563 SPRED2Q7Z698 418 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms