RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 MINDY3Q9H8M7 445 aa15.62■□□□□ 0.09
LINC00642-202ENST00000442515 RAB23Q9ULC3 237 aa15.62■□□□□ 0.09
LINC00642-202ENST00000442515 COL4A3BPQ9Y5P4 624 aa15.62■□□□□ 0.09
LINC00642-202ENST00000442515 ZZEF1O43149 2961 aa15.61■□□□□ 0.09
LINC00642-202ENST00000442515 MIA3Q5JRA6 1907 aa15.61■□□□□ 0.09
LINC00642-202ENST00000442515 NCAM2O15394 837 aa15.61■□□□□ 0.09
LINC00642-202ENST00000442515 ZBTB43O43298 467 aa15.61■□□□□ 0.09
LINC00642-202ENST00000442515 ITGA4P13612 1032 aa15.61■□□□□ 0.09
LINC00642-202ENST00000442515 KCNA4P22459 653 aa15.61■□□□□ 0.09
LINC00642-202ENST00000442515 CREMQ03060 361 aa15.61■□□□□ 0.09
LINC00642-202ENST00000442515 FZD5Q13467 585 aa15.61■□□□□ 0.09
LINC00642-202ENST00000442515 PFKFB3Q16875 520 aaPredicted RBP15.61■□□□□ 0.09
LINC00642-202ENST00000442515 LIN9Q5TKA1 542 aa15.61■□□□□ 0.09
LINC00642-202ENST00000442515 ITFG1Q8TB96 612 aa15.61■□□□□ 0.09
LINC00642-202ENST00000442515 SLC5A5Q92911 643 aa15.61■□□□□ 0.09
LINC00642-202ENST00000442515 ZFP42Q96MM3 310 aa15.61■□□□□ 0.09
LINC00642-202ENST00000442515 NELL2Q99435 816 aa15.61■□□□□ 0.09
LINC00642-202ENST00000442515 RNF39Q9H2S5 420 aa15.61■□□□□ 0.09
LINC00642-202ENST00000442515 UBN1Q9NPG3 1134 aa15.61■□□□□ 0.09
LINC00642-202ENST00000442515 ANGPTL2Q9UKU9 493 aa15.61■□□□□ 0.09
LINC00642-202ENST00000442515 IPPQ9Y573 584 aa15.61■□□□□ 0.09
LINC00642-202ENST00000442515 MYH9P35579 1960 aaKnown RBP15.61■□□□□ 0.09
LINC00642-202ENST00000442515 FAM208BQ5VWN6 2430 aa15.6■□□□□ 0.09
LINC00642-202ENST00000442515 GOLGA8AA7E2F4 631 aa15.6■□□□□ 0.09
LINC00642-202ENST00000442515 GOLGA8BA8MQT2 603 aa15.6■□□□□ 0.09
LINC00642-202ENST00000442515 CCL16O15467 120 aa15.6■□□□□ 0.09
LINC00642-202ENST00000442515 EDIL3O43854 480 aa15.6■□□□□ 0.09
LINC00642-202ENST00000442515 LRP3O75074 770 aa15.6■□□□□ 0.09
LINC00642-202ENST00000442515 NR1I2O75469 434 aa15.6■□□□□ 0.09
LINC00642-202ENST00000442515 RETP07949 1114 aa15.6■□□□□ 0.09
LINC00642-202ENST00000442515 ADCY1Q08828 1119 aa15.6■□□□□ 0.09
LINC00642-202ENST00000442515 PLA2G4FQ68DD2 849 aa15.6■□□□□ 0.09
LINC00642-202ENST00000442515 PRSS55Q6UWB4 352 aaPredicted RBP15.6■□□□□ 0.09
LINC00642-202ENST00000442515 ZNF852Q6ZMS4 543 aa15.6■□□□□ 0.09
LINC00642-202ENST00000442515 PRR23CQ6ZRP0 262 aa15.6■□□□□ 0.09
LINC00642-202ENST00000442515 MIER3Q7Z3K6 550 aa15.6■□□□□ 0.09
LINC00642-202ENST00000442515 NPAS3Q8IXF0 933 aa15.6■□□□□ 0.09
LINC00642-202ENST00000442515 CNNM3Q8NE01 707 aa15.6■□□□□ 0.09
LINC00642-202ENST00000442515 RDM1Q8NG50 284 aa15.6■□□□□ 0.09
LINC00642-202ENST00000442515 JPH2Q9BR39 696 aaPredicted RBP15.6■□□□□ 0.09
LINC00642-202ENST00000442515 COLEC11Q9BWP8 271 aa15.6■□□□□ 0.09
LINC00642-202ENST00000442515 EIF2AQ9BY44 585 aaKnown RBP15.6■□□□□ 0.09
LINC00642-202ENST00000442515 C6orf50Q9HD87 102 aa15.6■□□□□ 0.09
LINC00642-202ENST00000442515 SEMA4GQ9NTN9 838 aa15.6■□□□□ 0.09
LINC00642-202ENST00000442515 MIOSQ9NXC5 875 aa15.6■□□□□ 0.09
LINC00642-202ENST00000442515 BRPF3Q9ULD4 1205 aa15.6■□□□□ 0.09
LINC00642-202ENST00000442515 POLIQ9UNA4 740 aa15.6■□□□□ 0.09
LINC00642-202ENST00000442515 HES2Q9Y543 173 aa15.6■□□□□ 0.09
LINC00642-202ENST00000442515 SHISA7A6NL88 538 aa15.59■□□□□ 0.09
LINC00642-202ENST00000442515 C8AP07357 584 aa15.59■□□□□ 0.09
LINC00642-202ENST00000442515 HNRNPA1P09651 372 aaKnown RBP eCLIP15.59■□□□□ 0.09
LINC00642-202ENST00000442515 PMLP29590 882 aa15.59■□□□□ 0.09
LINC00642-202ENST00000442515 CDC27P30260 824 aa15.59■□□□□ 0.09
LINC00642-202ENST00000442515 RTP2Q5QGT7 225 aa15.59■□□□□ 0.09
LINC00642-202ENST00000442515 PPM1LQ5SGD2 360 aa15.59■□□□□ 0.09
LINC00642-202ENST00000442515 CREB3L3Q68CJ9 461 aa15.59■□□□□ 0.09
LINC00642-202ENST00000442515 PRR23BQ6ZRT6 265 aa15.59■□□□□ 0.09
LINC00642-202ENST00000442515 ANO5Q75V66 913 aa15.59■□□□□ 0.09
LINC00642-202ENST00000442515 SRGAP1Q7Z6B7 1085 aa15.59■□□□□ 0.09
LINC00642-202ENST00000442515 CELF5Q8N6W0 485 aaKnown RBP15.59■□□□□ 0.09
LINC00642-202ENST00000442515 CCDC136Q96JN2 1154 aa15.59■□□□□ 0.09
LINC00642-202ENST00000442515 LSG1Q9H089 658 aaKnown RBP15.59■□□□□ 0.09
LINC00642-202ENST00000442515 HEBP1Q9NRV9 189 aa15.59■□□□□ 0.09
LINC00642-202ENST00000442515 ADAM28Q9UKQ2 775 aa15.59■□□□□ 0.09
LINC00642-202ENST00000442515 MRPS17Q9Y2R5 130 aaKnown RBP15.59■□□□□ 0.09
LINC00642-202ENST00000442515 DDX11L8A8MPP1 907 aa15.58■□□□□ 0.08
LINC00642-202ENST00000442515 GDF9O60383 454 aa15.58■□□□□ 0.08
LINC00642-202ENST00000442515 PSMD10O75832 226 aa15.58■□□□□ 0.08
LINC00642-202ENST00000442515 SRGAP2CP0DJJ0 459 aa15.58■□□□□ 0.08
LINC00642-202ENST00000442515 NRLP54845 237 aa15.58■□□□□ 0.08
LINC00642-202ENST00000442515 CCDC12Q8WUD4 166 aaPredicted RBP15.58■□□□□ 0.08
LINC00642-202ENST00000442515 RABGGTAQ92696 567 aa15.58■□□□□ 0.08
LINC00642-202ENST00000442515 TCEANC2Q96MN5 208 aa15.58■□□□□ 0.08
LINC00642-202ENST00000442515 APOL6Q9BWW8 343 aa15.58■□□□□ 0.08
LINC00642-202ENST00000442515 CHRDQ9H2X0 955 aa15.58■□□□□ 0.08
LINC00642-202ENST00000442515 MYH15Q9Y2K3 1946 aa15.58■□□□□ 0.08
LINC00642-202ENST00000442515 XYLBO75191 536 aa15.57■□□□□ 0.08
LINC00642-202ENST00000442515 GNA11P29992 359 aa15.57■□□□□ 0.08
LINC00642-202ENST00000442515 HOXA9P31269 272 aa15.57■□□□□ 0.08
LINC00642-202ENST00000442515 CSRP2Q16527 193 aa15.57■□□□□ 0.08
LINC00642-202ENST00000442515 B3GNT9Q6UX72 402 aa15.57■□□□□ 0.08
LINC00642-202ENST00000442515 ZNF687Q8N1G0 1237 aa15.57■□□□□ 0.08
LINC00642-202ENST00000442515 PRPF31Q8WWY3 499 aaKnown RBP15.57■□□□□ 0.08
LINC00642-202ENST00000442515 PSPC1Q8WXF1 523 aaKnown RBP15.57■□□□□ 0.08
LINC00642-202ENST00000442515 SLC7A3Q8WY07 619 aa15.57■□□□□ 0.08
LINC00642-202ENST00000442515 DDX1Q92499 740 aaKnown RBP15.57■□□□□ 0.08
LINC00642-202ENST00000442515 TMEM143Q96AN5 459 aa15.57■□□□□ 0.08
LINC00642-202ENST00000442515 HCFC1R1Q9NWW0 138 aa15.57■□□□□ 0.08
LINC00642-202ENST00000442515 NDRG2Q9UN36 371 aaKnown RBP15.57■□□□□ 0.08
LINC00642-202ENST00000442515 CEP295Q9C0D2 2601 aa15.56■□□□□ 0.08
LINC00642-202ENST00000442515 TSPAN1O60635 241 aa15.56■□□□□ 0.08
LINC00642-202ENST00000442515 ECI2O75521 394 aa15.56■□□□□ 0.08
LINC00642-202ENST00000442515 ERLIN2O94905 339 aa15.56■□□□□ 0.08
LINC00642-202ENST00000442515 POU2F2P09086 479 aa15.56■□□□□ 0.08
LINC00642-202ENST00000442515 NPEPPSP55786 919 aa15.56■□□□□ 0.08
LINC00642-202ENST00000442515 SHC2P98077 582 aa15.56■□□□□ 0.08
LINC00642-202ENST00000442515 LAMTOR4Q0VGL1 99 aa15.56■□□□□ 0.08
LINC00642-202ENST00000442515 PPP2R5DQ14738 602 aa15.56■□□□□ 0.08
LINC00642-202ENST00000442515 PABPC1LQ4VXU2 614 aaKnown RBP15.56■□□□□ 0.08
LINC00642-202ENST00000442515 RNF149Q8NC42 400 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms