RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 CEP57L1Q8IYX8 460 aa16.5■□□□□ 0.23
CSNK1E-210ENST00000442216 COLGALT1Q8NBJ5 622 aa16.5■□□□□ 0.23
CSNK1E-210ENST00000442216 GDPD5Q8WTR4 605 aa16.5■□□□□ 0.23
CSNK1E-210ENST00000442216 TARS2Q9BW92 718 aaKnown RBP16.5■□□□□ 0.23
CSNK1E-210ENST00000442216 TRIM9Q9C026 710 aa16.5■□□□□ 0.23
CSNK1E-210ENST00000442216 NXF3Q9H4D5 531 aaKnown RBP16.5■□□□□ 0.23
CSNK1E-210ENST00000442216 PANK4Q9NVE7 773 aa16.5■□□□□ 0.23
CSNK1E-210ENST00000442216 TBC1D13Q9NVG8 400 aa16.5■□□□□ 0.23
CSNK1E-210ENST00000442216 CHMP5Q9NZZ3 219 aa16.5■□□□□ 0.23
CSNK1E-210ENST00000442216 TBX20Q9UMR3 447 aa16.5■□□□□ 0.23
CSNK1E-210ENST00000442216 HES2Q9Y543 173 aa16.5■□□□□ 0.23
CSNK1E-210ENST00000442216 PDCD11Q14690 1871 aaKnown RBP16.5■□□□□ 0.23
CSNK1E-210ENST00000442216 PRRC2BQ5JSZ5 2229 aaKnown RBP16.49■□□□□ 0.23
CSNK1E-210ENST00000442216 A0A1B0GVL5 298 aa16.49■□□□□ 0.23
CSNK1E-210ENST00000442216 MCF2P10911 925 aa16.49■□□□□ 0.23
CSNK1E-210ENST00000442216 IDEP14735 1019 aa16.49■□□□□ 0.23
CSNK1E-210ENST00000442216 IGFBP4P22692 258 aa16.49■□□□□ 0.23
CSNK1E-210ENST00000442216 PPM1AP35813 382 aa16.49■□□□□ 0.23
CSNK1E-210ENST00000442216 UBE3AQ05086 875 aa16.49■□□□□ 0.23
CSNK1E-210ENST00000442216 ALCAMQ13740 583 aa16.49■□□□□ 0.23
CSNK1E-210ENST00000442216 LONRF3Q496Y0 759 aa16.49■□□□□ 0.23
CSNK1E-210ENST00000442216 MRPS27Q92552 414 aaKnown RBP16.49■□□□□ 0.23
CSNK1E-210ENST00000442216 ZNF558Q96NG5 402 aa16.49■□□□□ 0.23
CSNK1E-210ENST00000442216 STRA6Q9BX79 667 aa16.49■□□□□ 0.23
CSNK1E-210ENST00000442216 RNF39Q9H2S5 420 aa16.49■□□□□ 0.23
CSNK1E-210ENST00000442216 GDPD2Q9HCC8 539 aa16.49■□□□□ 0.23
CSNK1E-210ENST00000442216 PLAGL2Q9UPG8 496 aa16.49■□□□□ 0.23
CSNK1E-210ENST00000442216 USP20Q9Y2K6 914 aa16.49■□□□□ 0.23
CSNK1E-210ENST00000442216 MTCH2Q9Y6C9 303 aa16.49■□□□□ 0.23
CSNK1E-210ENST00000442216 CHD7Q9P2D1 2997 aa16.49■□□□□ 0.23
CSNK1E-210ENST00000442216 ARL5CA6NH57 179 aa16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 ABLIM1O14639 778 aa16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 ACTN4O43707 911 aaKnown RBP16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 PPP1R37O75864 691 aa16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 MYL1P05976 194 aa16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 NMT1P30419 496 aaKnown RBP16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 SYKP43405 635 aa16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 ALDH7A1P49419 539 aaKnown RBP16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 PLCB3Q01970 1234 aa16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 RNASELQ05823 741 aaKnown RBP16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 ZNF568Q3ZCX4 644 aa16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 HERC4Q5GLZ8 1057 aaPredicted RBP16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 KCNT2Q6UVM3 1135 aa16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 MAP4K3Q8IVH8 894 aa16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 KLHL23Q8NBE8 558 aa16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 STAMQ92783 540 aa16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 MRPL38Q96DV4 380 aaKnown RBP16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 GAD1Q99259 594 aa16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 TMEM175Q9BSA9 504 aa16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 TCHPQ9BT92 498 aa16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 CDT1Q9H211 546 aa16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 NRDE2Q9H7Z3 1164 aa16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 MRPL44Q9H9J2 332 aaKnown RBP16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 PARP2Q9UGN5 583 aa16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 LZTS1Q9Y250 596 aa16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 INPP5FQ9Y2H2 1132 aa16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 PCDHB13Q9Y5F0 798 aa16.48■□□□□ 0.23
CSNK1E-210ENST00000442216 PVALEFA0A1B0GWK0 134 aa16.47■□□□□ 0.23
CSNK1E-210ENST00000442216 CLDN3O15551 220 aa16.47■□□□□ 0.23
CSNK1E-210ENST00000442216 ITGB1P05556 798 aa16.47■□□□□ 0.23
CSNK1E-210ENST00000442216 AKAP5P24588 427 aa16.47■□□□□ 0.23
CSNK1E-210ENST00000442216 MLH1P40692 756 aa16.47■□□□□ 0.23
CSNK1E-210ENST00000442216 GRM5P41594 1212 aa16.47■□□□□ 0.23
CSNK1E-210ENST00000442216 ASIC1P78348 528 aa16.47■□□□□ 0.23
CSNK1E-210ENST00000442216 MCL1Q07820 350 aa16.47■□□□□ 0.23
CSNK1E-210ENST00000442216 COASYQ13057 564 aa16.47■□□□□ 0.23
CSNK1E-210ENST00000442216 NOLC1Q14978 699 aaKnown RBP eCLIP16.47■□□□□ 0.23
CSNK1E-210ENST00000442216 FSIP1Q8NA03 581 aa16.47■□□□□ 0.23
CSNK1E-210ENST00000442216 MAFAQ8NHW3 353 aaPredicted RBP16.47■□□□□ 0.23
CSNK1E-210ENST00000442216 SPPL3Q8TCT6 385 aa16.47■□□□□ 0.23
CSNK1E-210ENST00000442216 BICD1Q96G01 975 aa16.47■□□□□ 0.23
CSNK1E-210ENST00000442216 FAM193BQ96PV7 902 aaPredicted RBP16.47■□□□□ 0.23
CSNK1E-210ENST00000442216 CCDC94Q9BW85 323 aaPredicted RBP16.47■□□□□ 0.23
CSNK1E-210ENST00000442216 APOL6Q9BWW8 343 aa16.47■□□□□ 0.23
CSNK1E-210ENST00000442216 SNTG2Q9NY99 539 aa16.47■□□□□ 0.23
CSNK1E-210ENST00000442216 SPG21Q9NZD8 308 aa16.47■□□□□ 0.23
CSNK1E-210ENST00000442216 HCSTQ9UBK5 93 aa16.47■□□□□ 0.23
CSNK1E-210ENST00000442216 SERTAD1Q9UHV2 236 aa16.47■□□□□ 0.23
CSNK1E-210ENST00000442216 TRANK1O15050 2925 aa16.46■□□□□ 0.23
CSNK1E-210ENST00000442216 GOLGA6L4A6NEF3 574 aa16.46■□□□□ 0.23
CSNK1E-210ENST00000442216 HNRNPDLO14979 420 aaKnown RBP16.46■□□□□ 0.23
CSNK1E-210ENST00000442216 FGF18O76093 207 aa16.46■□□□□ 0.23
CSNK1E-210ENST00000442216 RECQL4O94761 1208 aa16.46■□□□□ 0.23
CSNK1E-210ENST00000442216 LIG4P49917 911 aa16.46■□□□□ 0.23
CSNK1E-210ENST00000442216 NDUFA8P51970 172 aa16.46■□□□□ 0.23
CSNK1E-210ENST00000442216 BCAR1P56945 870 aa16.46■□□□□ 0.23
CSNK1E-210ENST00000442216 DSC1Q08554 894 aa16.46■□□□□ 0.23
CSNK1E-210ENST00000442216 GRIK3Q13003 919 aa16.46■□□□□ 0.23
CSNK1E-210ENST00000442216 KYAT1Q16773 422 aa16.46■□□□□ 0.23
CSNK1E-210ENST00000442216 STXBP4Q6ZWJ1 553 aa16.46■□□□□ 0.23
CSNK1E-210ENST00000442216 UNC13DQ70J99 1090 aa16.46■□□□□ 0.23
CSNK1E-210ENST00000442216 THNSL1Q8IYQ7 743 aa16.46■□□□□ 0.23
CSNK1E-210ENST00000442216 SLC39A11Q8N1S5 342 aa16.46■□□□□ 0.23
CSNK1E-210ENST00000442216 GSTCDQ8NEC7 633 aa16.46■□□□□ 0.23
CSNK1E-210ENST00000442216 RPS6KC1Q96S38 1066 aa16.46■□□□□ 0.23
CSNK1E-210ENST00000442216 TOPORSQ9NS56 1045 aaPredicted RBP16.46■□□□□ 0.23
CSNK1E-210ENST00000442216 EXOC7Q9UPT5 735 aa16.46■□□□□ 0.23
CSNK1E-210ENST00000442216 GRM6O15303 877 aa16.45■□□□□ 0.22
CSNK1E-210ENST00000442216 ZC3H11AO75152 810 aaKnown RBP eCLIP16.45■□□□□ 0.22
CSNK1E-210ENST00000442216 GCNT3O95395 438 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms