RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 RSAD1Q9HA92 442 aa10.37□□□□□ -0.75
LSG1-202ENST00000427461 LY9Q9HBG7 655 aa10.37□□□□□ -0.75
LSG1-202ENST00000427461 DNMT3BQ9UBC3 853 aaKnown RBP10.37□□□□□ -0.75
LSG1-202ENST00000427461 FBXW11Q9UKB1 542 aa10.37□□□□□ -0.75
LSG1-202ENST00000427461 MSRB2Q9Y3D2 182 aa10.37□□□□□ -0.75
LSG1-202ENST00000427461 NEUROG3Q9Y4Z2 214 aa10.37□□□□□ -0.75
LSG1-202ENST00000427461 PCDHB2Q9Y5E7 798 aa10.37□□□□□ -0.75
LSG1-202ENST00000427461 MAFBQ9Y5Q3 323 aaPredicted RBP10.37□□□□□ -0.75
LSG1-202ENST00000427461 PIAS3Q9Y6X2 628 aa10.37□□□□□ -0.75
LSG1-202ENST00000427461 EML5Q05BV3 1969 aa10.37□□□□□ -0.75
LSG1-202ENST00000427461 PDCD11Q14690 1871 aaKnown RBP10.36□□□□□ -0.75
LSG1-202ENST00000427461 A0A087WZ62 844 aa10.36□□□□□ -0.75
LSG1-202ENST00000427461 C1RP00736 705 aa10.36□□□□□ -0.75
LSG1-202ENST00000427461 CEACAM1P13688 526 aa10.36□□□□□ -0.75
LSG1-202ENST00000427461 PTGDRQ13258 359 aa10.36□□□□□ -0.75
LSG1-202ENST00000427461 SLC5A9Q2M3M2 681 aa10.36□□□□□ -0.75
LSG1-202ENST00000427461 PABPC1LQ4VXU2 614 aaKnown RBP10.36□□□□□ -0.75
LSG1-202ENST00000427461 MIS18BP1Q6P0N0 1132 aa10.36□□□□□ -0.75
LSG1-202ENST00000427461 CACNA2D4Q7Z3S7 1137 aa10.36□□□□□ -0.75
LSG1-202ENST00000427461 DEFB124Q8NES8 71 aa10.36□□□□□ -0.75
LSG1-202ENST00000427461 GAB3Q8WWW8 586 aa10.36□□□□□ -0.75
LSG1-202ENST00000427461 RABGGTAQ92696 567 aa10.36□□□□□ -0.75
LSG1-202ENST00000427461 PGBD4Q96DM1 585 aa10.36□□□□□ -0.75
LSG1-202ENST00000427461 RRP36Q96EU6 259 aaKnown RBP10.36□□□□□ -0.75
LSG1-202ENST00000427461 FDXACB1Q9BRP7 624 aaPredicted RBP10.36□□□□□ -0.75
LSG1-202ENST00000427461 ZNF334Q9HCZ1 680 aaPredicted RBP10.36□□□□□ -0.75
LSG1-202ENST00000427461 VPS45Q9NRW7 570 aa10.36□□□□□ -0.75
LSG1-202ENST00000427461 CACNA2D2Q9NY47 1150 aa10.36□□□□□ -0.75
LSG1-202ENST00000427461 FNIP2Q9P278 1114 aa10.36□□□□□ -0.75
LSG1-202ENST00000427461 CEP131Q9UPN4 1083 aa10.36□□□□□ -0.75
LSG1-202ENST00000427461 TENM4Q6N022 2769 aa10.35□□□□□ -0.75
LSG1-202ENST00000427461 hCG_1642624A0A1W2PR95 340 aa10.35□□□□□ -0.75
LSG1-202ENST00000427461 DHX15O43143 795 aaKnown RBP10.35□□□□□ -0.75
LSG1-202ENST00000427461 RPP40O75818 363 aaKnown RBP10.35□□□□□ -0.75
LSG1-202ENST00000427461 PAPSS2O95340 614 aaPredicted RBP10.35□□□□□ -0.75
LSG1-202ENST00000427461 SEC24BO95487 1268 aa10.35□□□□□ -0.75
LSG1-202ENST00000427461 HNRNPA1P09651 372 aaKnown RBP eCLIP10.35□□□□□ -0.75
LSG1-202ENST00000427461 FCARP24071 287 aa10.35□□□□□ -0.75
LSG1-202ENST00000427461 RAB27AP51159 221 aa10.35□□□□□ -0.75
LSG1-202ENST00000427461 CEP55Q53EZ4 464 aa10.35□□□□□ -0.75
LSG1-202ENST00000427461 LIN9Q5TKA1 542 aa10.35□□□□□ -0.75
LSG1-202ENST00000427461 DAB2IPQ5VWQ8 1189 aa10.35□□□□□ -0.75
LSG1-202ENST00000427461 CMTR1Q8N1G2 835 aaKnown RBP10.35□□□□□ -0.75
LSG1-202ENST00000427461 HNRNPLLQ8WVV9 542 aaKnown RBP10.35□□□□□ -0.75
LSG1-202ENST00000427461 ELSPBP1Q96BH3 223 aa10.35□□□□□ -0.75
LSG1-202ENST00000427461 GCOM2Q9BZD3 368 aaPredicted RBP10.35□□□□□ -0.75
LSG1-202ENST00000427461 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.35□□□□□ -0.75
LSG1-202ENST00000427461 MIOSQ9NXC5 875 aa10.35□□□□□ -0.75
LSG1-202ENST00000427461 KANSL3Q9P2N6 904 aa10.35□□□□□ -0.75
LSG1-202ENST00000427461 GABBR1Q9UBS5 961 aa10.35□□□□□ -0.75
LSG1-202ENST00000427461 MRPS23Q9Y3D9 190 aaKnown RBP10.35□□□□□ -0.75
LSG1-202ENST00000427461 TDRD15B5MCY1 1934 aaKnown RBP10.35□□□□□ -0.75
LSG1-202ENST00000427461 LNP1A1A4G5 178 aa10.34□□□□□ -0.75
LSG1-202ENST00000427461 MEIS1O00470 390 aa10.34□□□□□ -0.75
LSG1-202ENST00000427461 ADAM12O43184 909 aa10.34□□□□□ -0.75
LSG1-202ENST00000427461 CEBPBP17676 345 aa10.34□□□□□ -0.75
LSG1-202ENST00000427461 CSRP1P21291 193 aaKnown RBP10.34□□□□□ -0.75
LSG1-202ENST00000427461 SFPQP23246 707 aaKnown RBP eCLIP10.34□□□□□ -0.75
LSG1-202ENST00000427461 GDI1P31150 447 aa10.34□□□□□ -0.75
LSG1-202ENST00000427461 IMMTQ16891 758 aaKnown RBP10.34□□□□□ -0.75
LSG1-202ENST00000427461 USP41Q3LFD5 358 aa10.34□□□□□ -0.75
LSG1-202ENST00000427461 RTP2Q5QGT7 225 aa10.34□□□□□ -0.75
LSG1-202ENST00000427461 FUT10Q6P4F1 479 aa10.34□□□□□ -0.75
LSG1-202ENST00000427461 CATSPER4Q7RTX7 472 aa10.34□□□□□ -0.75
LSG1-202ENST00000427461 MRPL10Q7Z7H8 261 aaKnown RBP10.34□□□□□ -0.75
LSG1-202ENST00000427461 MAP4K3Q8IVH8 894 aa10.34□□□□□ -0.75
LSG1-202ENST00000427461 KSR1Q8IVT5 923 aa10.34□□□□□ -0.75
LSG1-202ENST00000427461 GLIS3Q8NEA6 775 aa10.34□□□□□ -0.75
LSG1-202ENST00000427461 SLC7A14Q8TBB6 771 aa10.34□□□□□ -0.75
LSG1-202ENST00000427461 LRIG1Q96JA1 1093 aa10.34□□□□□ -0.75
LSG1-202ENST00000427461 CLSTN3Q9BQT9 956 aa10.34□□□□□ -0.75
LSG1-202ENST00000427461 TRMT61BQ9BVS5 477 aaKnown RBP10.34□□□□□ -0.75
LSG1-202ENST00000427461 SPZ1Q9BXG8 430 aa10.34□□□□□ -0.75
LSG1-202ENST00000427461 CACNG4Q9UBN1 327 aa10.34□□□□□ -0.75
LSG1-202ENST00000427461 SEC63Q9UGP8 760 aaKnown RBP10.34□□□□□ -0.75
LSG1-202ENST00000427461 KCNH3Q9ULD8 1083 aa10.34□□□□□ -0.75
LSG1-202ENST00000427461 PCDHGA5Q9Y5G8 931 aa10.34□□□□□ -0.75
LSG1-202ENST00000427461 CDX4O14627 284 aaPredicted RBP10.33□□□□□ -0.76
LSG1-202ENST00000427461 IFIT3O14879 490 aaKnown RBP10.33□□□□□ -0.76
LSG1-202ENST00000427461 ZNF862O60290 1169 aa10.33□□□□□ -0.76
LSG1-202ENST00000427461 XYLBO75191 536 aa10.33□□□□□ -0.76
LSG1-202ENST00000427461 PLEKHA8P1O95397 391 aa10.33□□□□□ -0.76
LSG1-202ENST00000427461 CCDC192P0DO97 292 aa10.33□□□□□ -0.76
LSG1-202ENST00000427461 SOX9P48436 509 aa10.33□□□□□ -0.76
LSG1-202ENST00000427461 SCNN1GP51170 649 aa10.33□□□□□ -0.76
LSG1-202ENST00000427461 FGD1P98174 961 aa10.33□□□□□ -0.76
LSG1-202ENST00000427461 DSC1Q08554 894 aa10.33□□□□□ -0.76
LSG1-202ENST00000427461 UAP1L1Q3KQV9 507 aa10.33□□□□□ -0.76
LSG1-202ENST00000427461 UBXN11Q5T124 520 aa10.33□□□□□ -0.76
LSG1-202ENST00000427461 C20orf194Q5TEA3 1177 aa10.33□□□□□ -0.76
LSG1-202ENST00000427461 LARP1BQ659C4 914 aaKnown RBP10.33□□□□□ -0.76
LSG1-202ENST00000427461 VITQ6UXI7 678 aa10.33□□□□□ -0.76
LSG1-202ENST00000427461 ZNF710Q8N1W2 664 aa10.33□□□□□ -0.76
LSG1-202ENST00000427461 IRF7Q92985 503 aa10.33□□□□□ -0.76
LSG1-202ENST00000427461 GAD1Q99259 594 aa10.33□□□□□ -0.76
LSG1-202ENST00000427461 SH2D3AQ9BRG2 576 aa10.33□□□□□ -0.76
LSG1-202ENST00000427461 MKNK1Q9BUB5 465 aa10.33□□□□□ -0.76
LSG1-202ENST00000427461 CHMP4BQ9H444 224 aaKnown RBP10.33□□□□□ -0.76
LSG1-202ENST00000427461 CNNM2Q9H8M5 875 aa10.33□□□□□ -0.76
LSG1-202ENST00000427461 DACH1Q9UI36 760 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms