RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 PGBD4Q96DM1 585 aa13.5□□□□□ -0.25
UFD1-203ENST00000421968 MBOAT7Q96N66 472 aa13.5□□□□□ -0.25
UFD1-203ENST00000421968 ZNF334Q9HCZ1 680 aaPredicted RBP13.5□□□□□ -0.25
UFD1-203ENST00000421968 KCNH7Q9NS40 1196 aa13.5□□□□□ -0.25
UFD1-203ENST00000421968 CHST7Q9NS84 486 aa13.5□□□□□ -0.25
UFD1-203ENST00000421968 HCFC1R1Q9NWW0 138 aa13.5□□□□□ -0.25
UFD1-203ENST00000421968 GDE1Q9NZC3 331 aa13.5□□□□□ -0.25
UFD1-203ENST00000421968 KANSL3Q9P2N6 904 aa13.5□□□□□ -0.25
UFD1-203ENST00000421968 FBXW11Q9UKB1 542 aa13.5□□□□□ -0.25
UFD1-203ENST00000421968 WDR81Q562E7 1941 aa13.5□□□□□ -0.25
UFD1-203ENST00000421968 NFASCO94856 1347 aa13.49□□□□□ -0.25
UFD1-203ENST00000421968 H0Y626 953 aa13.49□□□□□ -0.25
UFD1-203ENST00000421968 PIK3CDO00329 1044 aa13.49□□□□□ -0.25
UFD1-203ENST00000421968 CDX4O14627 284 aaPredicted RBP13.49□□□□□ -0.25
UFD1-203ENST00000421968 MAGEB2O15479 319 aa13.49□□□□□ -0.25
UFD1-203ENST00000421968 TRIM16O95361 564 aa13.49□□□□□ -0.25
UFD1-203ENST00000421968 GDI1P31150 447 aa13.49□□□□□ -0.25
UFD1-203ENST00000421968 GPC3P51654 580 aa13.49□□□□□ -0.25
UFD1-203ENST00000421968 CCDC60Q8IWA6 550 aaPredicted RBP13.49□□□□□ -0.25
UFD1-203ENST00000421968 LRRC71Q8N4P6 559 aa13.49□□□□□ -0.25
UFD1-203ENST00000421968 NLRP7Q8WX94 980 aa13.49□□□□□ -0.25
UFD1-203ENST00000421968 ZNF302Q9NR11 478 aa13.49□□□□□ -0.25
UFD1-203ENST00000421968 PIN4Q9Y237 131 aaKnown RBP13.49□□□□□ -0.25
UFD1-203ENST00000421968 PTPN13Q12923 2485 aa13.48□□□□□ -0.25
UFD1-203ENST00000421968 ZMYM6O95789 1325 aa13.48□□□□□ -0.25
UFD1-203ENST00000421968 BCLAF3A2AJT9 711 aaKnown RBP13.48□□□□□ -0.25
UFD1-203ENST00000421968 B4E1Z4 1266 aa13.48□□□□□ -0.25
UFD1-203ENST00000421968 KHNYNO15037 678 aaKnown RBP13.48□□□□□ -0.25
UFD1-203ENST00000421968 CYTH3O43739 400 aa13.48□□□□□ -0.25
UFD1-203ENST00000421968 ZNF623O75123 536 aa13.48□□□□□ -0.25
UFD1-203ENST00000421968 AKAP3O75969 853 aa13.48□□□□□ -0.25
UFD1-203ENST00000421968 EFEMP2O95967 443 aa13.48□□□□□ -0.25
UFD1-203ENST00000421968 ATP4AP20648 1035 aa13.48□□□□□ -0.25
UFD1-203ENST00000421968 HOXA9P31269 272 aa13.48□□□□□ -0.25
UFD1-203ENST00000421968 RAB27AP51159 221 aa13.48□□□□□ -0.25
UFD1-203ENST00000421968 CREMQ03060 361 aa13.48□□□□□ -0.25
UFD1-203ENST00000421968 ELF2Q15723 593 aa13.48□□□□□ -0.25
UFD1-203ENST00000421968 IFIT1BQ5T764 474 aaKnown RBP13.48□□□□□ -0.25
UFD1-203ENST00000421968 ABHD15Q6UXT9 468 aa13.48□□□□□ -0.25
UFD1-203ENST00000421968 AGMOQ6ZNB7 445 aa13.48□□□□□ -0.25
UFD1-203ENST00000421968 MAP4K3Q8IVH8 894 aa13.48□□□□□ -0.25
UFD1-203ENST00000421968 RSAD1Q9HA92 442 aa13.48□□□□□ -0.25
UFD1-203ENST00000421968 ZFP14Q9HCL3 533 aa13.48□□□□□ -0.25
UFD1-203ENST00000421968 TRPV5Q9NQA5 729 aa13.48□□□□□ -0.25
UFD1-203ENST00000421968 DNMT3BQ9UBC3 853 aaKnown RBP13.48□□□□□ -0.25
UFD1-203ENST00000421968 MYH9P35579 1960 aaKnown RBP13.48□□□□□ -0.25
UFD1-203ENST00000421968 COL4A2P08572 1712 aa13.47□□□□□ -0.25
UFD1-203ENST00000421968 NUP205Q92621 2012 aa13.47□□□□□ -0.25
UFD1-203ENST00000421968 CCDC163A0A0D9SF12 145 aa13.47□□□□□ -0.25
UFD1-203ENST00000421968 DDX39AO00148 427 aaKnown RBP13.47□□□□□ -0.25
UFD1-203ENST00000421968 USP41Q3LFD5 358 aa13.47□□□□□ -0.25
UFD1-203ENST00000421968 DGKKQ5KSL6 1271 aa13.47□□□□□ -0.25
UFD1-203ENST00000421968 SWSAP1Q6NVH7 229 aa13.47□□□□□ -0.25
UFD1-203ENST00000421968 MDM1Q8TC05 714 aa13.47□□□□□ -0.25
UFD1-203ENST00000421968 UBAC1Q9BSL1 405 aa13.47□□□□□ -0.25
UFD1-203ENST00000421968 DUSP15Q9H1R2 295 aaPredicted RBP13.47□□□□□ -0.25
UFD1-203ENST00000421968 HELLSQ9NRZ9 838 aa13.47□□□□□ -0.25
UFD1-203ENST00000421968 FOXD4L1Q9NU39 408 aa13.47□□□□□ -0.25
UFD1-203ENST00000421968 ZSWIM5Q9P217 1185 aa13.47□□□□□ -0.25
UFD1-203ENST00000421968 CEP131Q9UPN4 1083 aa13.47□□□□□ -0.25
UFD1-203ENST00000421968 TEP1Q99973 2627 aaKnown RBP13.46□□□□□ -0.25
UFD1-203ENST00000421968 EML5Q05BV3 1969 aa13.46□□□□□ -0.25
UFD1-203ENST00000421968 F8W810 466 aa13.46□□□□□ -0.25
UFD1-203ENST00000421968 EXTL3O43909 919 aa13.46□□□□□ -0.25
UFD1-203ENST00000421968 RHOBTB1O94844 696 aa13.46□□□□□ -0.25
UFD1-203ENST00000421968 CCNE2O96020 404 aa13.46□□□□□ -0.25
UFD1-203ENST00000421968 FCARP24071 287 aa13.46□□□□□ -0.25
UFD1-203ENST00000421968 KIF5BP33176 963 aa13.46□□□□□ -0.25
UFD1-203ENST00000421968 NT5C2P49902 561 aa13.46□□□□□ -0.25
UFD1-203ENST00000421968 ITGB3BPQ13352 177 aaPredicted RBP13.46□□□□□ -0.25
UFD1-203ENST00000421968 POTEHQ6S545 545 aa13.46□□□□□ -0.25
UFD1-203ENST00000421968 COLGALT2Q8IYK4 626 aa13.46□□□□□ -0.25
UFD1-203ENST00000421968 GPR65Q8IYL9 337 aa13.46□□□□□ -0.25
UFD1-203ENST00000421968 LINC01465Q8N7H1 131 aa13.46□□□□□ -0.25
UFD1-203ENST00000421968 SLC7A14Q8TBB6 771 aa13.46□□□□□ -0.25
UFD1-203ENST00000421968 CRELD1Q96HD1 420 aa13.46□□□□□ -0.25
UFD1-203ENST00000421968 GCOM2Q9BZD3 368 aaPredicted RBP13.46□□□□□ -0.25
UFD1-203ENST00000421968 PCDHB2Q9Y5E7 798 aa13.46□□□□□ -0.25
UFD1-203ENST00000421968 PDCD11Q14690 1871 aaKnown RBP13.45□□□□□ -0.26
UFD1-203ENST00000421968 ZNF213O14771 459 aa13.45□□□□□ -0.26
UFD1-203ENST00000421968 MAP3K13O43283 966 aa13.45□□□□□ -0.26
UFD1-203ENST00000421968 CEBPBP17676 345 aa13.45□□□□□ -0.26
UFD1-203ENST00000421968 PSMC3P17980 439 aa13.45□□□□□ -0.26
UFD1-203ENST00000421968 SFPQP23246 707 aaKnown RBP eCLIP13.45□□□□□ -0.26
UFD1-203ENST00000421968 SLC5A9Q2M3M2 681 aa13.45□□□□□ -0.26
UFD1-203ENST00000421968 WDR44Q5JSH3 913 aa13.45□□□□□ -0.26
UFD1-203ENST00000421968 MIS18BP1Q6P0N0 1132 aa13.45□□□□□ -0.26
UFD1-203ENST00000421968 FUT10Q6P4F1 479 aa13.45□□□□□ -0.26
UFD1-203ENST00000421968 C1orf228Q6PIY5 440 aa13.45□□□□□ -0.26
UFD1-203ENST00000421968 PRSS55Q6UWB4 352 aaPredicted RBP13.45□□□□□ -0.26
UFD1-203ENST00000421968 ZNF843Q8N446 348 aa13.45□□□□□ -0.26
UFD1-203ENST00000421968 PI4K2BQ8TCG2 481 aa13.45□□□□□ -0.26
UFD1-203ENST00000421968 MXRA8Q9BRK3 442 aa13.45□□□□□ -0.26
UFD1-203ENST00000421968 COLEC11Q9BWP8 271 aa13.45□□□□□ -0.26
UFD1-203ENST00000421968 GPR62Q9BZJ7 368 aa13.45□□□□□ -0.26
UFD1-203ENST00000421968 CLMPQ9H6B4 373 aa13.45□□□□□ -0.26
UFD1-203ENST00000421968 ZBTB40Q9NUA8 1239 aa13.45□□□□□ -0.26
UFD1-203ENST00000421968 ABCA7Q8IZY2 2146 aa13.45□□□□□ -0.26
UFD1-203ENST00000421968 TTC41PQ6P2S7 1318 aa13.44□□□□□ -0.26
UFD1-203ENST00000421968 CNTNAP2Q9UHC6 1331 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms