RNA–Protein interactions for RNA: ENST00000417437.6

VNN3-205, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-205ENST00000417437 KHSRPQ92945 711 aaKnown RBP eCLIP7.4□□□□□ -1.22
VNN3-205ENST00000417437 CUL5Q93034 780 aa7.4□□□□□ -1.22
VNN3-205ENST00000417437 HPS3Q969F9 1004 aa7.4□□□□□ -1.22
VNN3-205ENST00000417437 CEP95Q96GE4 821 aa7.4□□□□□ -1.22
VNN3-205ENST00000417437 MS4A3Q96HJ5 214 aa7.4□□□□□ -1.22
VNN3-205ENST00000417437 SNX27Q96L92 541 aa7.4□□□□□ -1.22
VNN3-205ENST00000417437 AGBL1Q96MI9 1066 aa7.4□□□□□ -1.22
VNN3-205ENST00000417437 TLR10Q9BXR5 811 aa7.4□□□□□ -1.22
VNN3-205ENST00000417437 CPVLQ9H3G5 476 aa7.4□□□□□ -1.22
VNN3-205ENST00000417437 UBE2ZQ9H832 354 aaPredicted RBP7.4□□□□□ -1.22
VNN3-205ENST00000417437 SLC38A10Q9HBR0 1119 aa7.4□□□□□ -1.22
VNN3-205ENST00000417437 GPCPD1Q9NPB8 672 aa7.4□□□□□ -1.22
VNN3-205ENST00000417437 C11orf16Q9NQ32 467 aa7.4□□□□□ -1.22
VNN3-205ENST00000417437 RNF146Q9NTX7 359 aa7.4□□□□□ -1.22
VNN3-205ENST00000417437 NYAP2Q9P242 653 aa7.4□□□□□ -1.22
VNN3-205ENST00000417437 DDX25Q9UHL0 483 aaKnown RBP7.4□□□□□ -1.22
VNN3-205ENST00000417437 FAM50BQ9Y247 325 aa7.4□□□□□ -1.22
VNN3-205ENST00000417437 Q9Y3F1 56 aa7.4□□□□□ -1.22
VNN3-205ENST00000417437 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.4□□□□□ -1.22
VNN3-205ENST00000417437 STK24Q9Y6E0 443 aa7.4□□□□□ -1.22
VNN3-205ENST00000417437 BZW2Q9Y6E2 419 aaKnown RBP7.4□□□□□ -1.22
VNN3-205ENST00000417437 CAPN6Q9Y6Q1 641 aa7.4□□□□□ -1.22
VNN3-205ENST00000417437 COL4A4P53420 1690 aaPredicted RBP7.39□□□□□ -1.23
VNN3-205ENST00000417437 ASTN1O14525 1302 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 GRIN2DO15399 1336 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 FRMPD2Q68DX3 1309 aaPredicted RBP7.39□□□□□ -1.23
VNN3-205ENST00000417437 BTNL10A8MVZ5 291 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 CES2O00748 559 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 CETN3O15182 167 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 EPHB6O15197 1021 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 NCK2O43639 380 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 BUB1O43683 1085 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 SLC37A4O43826 429 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 BAIAP3O94812 1187 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 TDP2O95551 362 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 SSBP05455 408 aaKnown RBP eCLIP7.39□□□□□ -1.23
VNN3-205ENST00000417437 KRT18P05783 430 aaKnown RBP7.39□□□□□ -1.23
VNN3-205ENST00000417437 PDHBP11177 359 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 BMP3P12645 472 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 CXCR5P32302 372 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 SLC1A4P43007 532 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 STAT2P52630 851 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 MARSP56192 900 aaKnown RBP7.39□□□□□ -1.23
VNN3-205ENST00000417437 POLR2FP61218 127 aaKnown RBP7.39□□□□□ -1.23
VNN3-205ENST00000417437 GNGT1P63211 74 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 SLC7A5Q01650 507 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 KLHL30Q0D2K2 578 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 CDC37Q16543 378 aaPredicted RBP7.39□□□□□ -1.23
VNN3-205ENST00000417437 HYIQ5T013 277 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 MEI1Q5TIA1 1274 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 HGSNATQ68CP4 663 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 SLFN13Q68D06 897 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 MCTP2Q6DN12 878 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 PTCRAQ6ISU1 281 aaPredicted RBP7.39□□□□□ -1.23
VNN3-205ENST00000417437 NSMFQ6X4W1 530 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 MICALCLQ6ZW33 695 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 SPATS2Q86XZ4 545 aaKnown RBP7.39□□□□□ -1.23
VNN3-205ENST00000417437 FBXO16Q8IX29 292 aaPredicted RBP7.39□□□□□ -1.23
VNN3-205ENST00000417437 FAM178BQ8IXR5 827 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 LRRC47Q8N1G4 583 aaKnown RBP7.39□□□□□ -1.23
VNN3-205ENST00000417437 MREGQ8N565 214 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 OR6J1Q8NGC5 347 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 WHAMMQ8TF30 809 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 GDPD5Q8WTR4 605 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 HDAC7Q8WUI4 952 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 LMBR1Q8WVP7 490 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 RIN2Q8WYP3 895 aaPredicted RBP7.39□□□□□ -1.23
VNN3-205ENST00000417437 DNAJC19Q96DA6 116 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 PBKQ96KB5 322 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 MPHOSPH6Q99547 160 aaKnown RBP7.39□□□□□ -1.23
VNN3-205ENST00000417437 MTG1Q9BT17 334 aaPredicted RBP7.39□□□□□ -1.23
VNN3-205ENST00000417437 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.39□□□□□ -1.23
VNN3-205ENST00000417437 VTA1Q9NP79 307 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 NLRC4Q9NPP4 1024 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 SCUBE2Q9NQ36 999 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 GDF3Q9NR23 364 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 PDGFCQ9NRA1 345 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 MTMR4Q9NYA4 1195 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 AIPL1Q9NZN9 384 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 LMCD1Q9NZU5 365 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 PCDHA12Q9UN75 941 aa7.39□□□□□ -1.23
VNN3-205ENST00000417437 GNEQ9Y223 722 aaKnown RBP7.39□□□□□ -1.23
VNN3-205ENST00000417437 PLIN4Q96Q06 1357 aa7.38□□□□□ -1.23
VNN3-205ENST00000417437 SOWAHBA6NEL2 793 aa7.38□□□□□ -1.23
VNN3-205ENST00000417437 EIF3HO15372 352 aaKnown RBP eCLIP7.38□□□□□ -1.23
VNN3-205ENST00000417437 DCXO43602 365 aa7.38□□□□□ -1.23
VNN3-205ENST00000417437 KPNA6O60684 536 aa7.38□□□□□ -1.23
VNN3-205ENST00000417437 PALMO75781 387 aa7.38□□□□□ -1.23
VNN3-205ENST00000417437 NOL4O94818 638 aa7.38□□□□□ -1.23
VNN3-205ENST00000417437 TTLL1O95922 423 aa7.38□□□□□ -1.23
VNN3-205ENST00000417437 CPP00450 1065 aa7.38□□□□□ -1.23
VNN3-205ENST00000417437 IQCF3P0C7M6 154 aa7.38□□□□□ -1.23
VNN3-205ENST00000417437 PLA2G4BP0C869 781 aa7.38□□□□□ -1.23
VNN3-205ENST00000417437 SNHG28P0DPA3 235 aa7.38□□□□□ -1.23
VNN3-205ENST00000417437 ANXA13P27216 316 aa7.38□□□□□ -1.23
VNN3-205ENST00000417437 USP11P51784 963 aa7.38□□□□□ -1.23
VNN3-205ENST00000417437 NKX3-2P78367 333 aa7.38□□□□□ -1.23
VNN3-205ENST00000417437 NHLH1Q02575 133 aa7.38□□□□□ -1.23
VNN3-205ENST00000417437 GUCY2DQ02846 1103 aa7.38□□□□□ -1.23
VNN3-205ENST00000417437 ZNF543Q08ER8 600 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms