RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 RIPK2O43353 540 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 XBP1P17861 261 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 GNAT2P19087 354 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 ATP5DP30049 168 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 DR1Q01658 176 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 DSG1Q02413 1049 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 DCTN2Q13561 401 aaKnown RBP6.83□□□□□ -1.32
CCNT1-202ENST00000417344 AGERQ15109 404 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 RC3H1Q5TC82 1133 aaKnown RBP6.83□□□□□ -1.32
CCNT1-202ENST00000417344 ZDHHC24Q6UX98 284 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 B3GNT6Q6ZMB0 384 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 LIAT1Q6ZQX7 453 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 ARHGAP27Q6ZUM4 889 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 NANOGNBQ7Z5D8 188 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 SATL1Q86VE3 508 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 CCDC65Q8IXS2 484 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 CMTR1Q8N1G2 835 aaKnown RBP6.83□□□□□ -1.32
CCNT1-202ENST00000417344 FAM133AQ8N9E0 248 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.83□□□□□ -1.32
CCNT1-202ENST00000417344 DEPTORQ8TB45 409 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 ADAM32Q8TC27 787 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 FBXO25Q8TCJ0 367 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 DTX3LQ8TDB6 740 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 SYN2Q92777 582 aaPredicted RBP6.83□□□□□ -1.32
CCNT1-202ENST00000417344 DGCR14Q96DF8 476 aaKnown RBP6.83□□□□□ -1.32
CCNT1-202ENST00000417344 MIPEPQ99797 713 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.83□□□□□ -1.32
CCNT1-202ENST00000417344 ROPN1BQ9BZX4 212 aaPredicted RBP6.83□□□□□ -1.32
CCNT1-202ENST00000417344 NT5C3AQ9H0P0 336 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 EPB41L1Q9H4G0 881 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 ROPN1Q9HAT0 212 aaPredicted RBP6.83□□□□□ -1.32
CCNT1-202ENST00000417344 CLIC5Q9NZA1 410 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 STARD13Q9Y3M8 1113 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 ARHGAP23Q9P227 1491 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 FAM196BA6NMK8 535 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 LSM1O15116 133 aaKnown RBP6.83□□□□□ -1.32
CCNT1-202ENST00000417344 TLR2O60603 784 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 OPHN1O60890 802 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 RNASEH1O60930 286 aaKnown RBP6.83□□□□□ -1.32
CCNT1-202ENST00000417344 GH1P01241 217 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 CDK4P11802 303 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 CREB1P16220 341 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 FGFR4P22455 802 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 GEMIN4P57678 1058 aaKnown RBP6.83□□□□□ -1.32
CCNT1-202ENST00000417344 PDE1BQ01064 536 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 TCIRG1Q13488 830 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 IL17AQ16552 155 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 MAN2A1Q16706 1144 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 PTPROQ16827 1216 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 KIAA1755Q5JYT7 1200 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 UBAP2Q5T6F2 1119 aaKnown RBP6.83□□□□□ -1.32
CCNT1-202ENST00000417344 THOC7Q6I9Y2 204 aaKnown RBP6.83□□□□□ -1.32
CCNT1-202ENST00000417344 IZUMO2Q6UXV1 221 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 ARHGEF18Q6ZSZ5 1173 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 LRRC57Q8N9N7 239 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 DQX1Q8TE96 717 aaKnown RBP6.83□□□□□ -1.32
CCNT1-202ENST00000417344 GAB3Q8WWW8 586 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 GFM2Q969S9 779 aaKnown RBP6.83□□□□□ -1.32
CCNT1-202ENST00000417344 SHISA4Q96DD7 197 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 CRAMP1Q96RY5 1269 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 MYD88Q99836 296 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 OCSTAMPQ9BR26 566 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 PHF20Q9BVI0 1012 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 CADM1Q9BY67 442 aaKnown RBP6.83□□□□□ -1.32
CCNT1-202ENST00000417344 GOLPH3Q9H4A6 298 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 ALG2Q9H553 416 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 DISC1Q9NRI5 854 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 FAIMQ9NVQ4 179 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 CROTQ9UKG9 612 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 ATP6V0A2Q9Y487 856 aa6.83□□□□□ -1.32
CCNT1-202ENST00000417344 RIMBP3CA6NJZ7 1639 aa6.82□□□□□ -1.32
CCNT1-202ENST00000417344 RIMBP3BA6NNM3 1639 aa6.82□□□□□ -1.32
CCNT1-202ENST00000417344 RIMBP3Q9UFD9 1639 aa6.82□□□□□ -1.32
CCNT1-202ENST00000417344 USP6P35125 1406 aa6.82□□□□□ -1.32
CCNT1-202ENST00000417344 ACEP12821 1306 aa6.82□□□□□ -1.32
CCNT1-202ENST00000417344 A2ML1A8K2U0 1454 aa6.82□□□□□ -1.32
CCNT1-202ENST00000417344 A0A087X0T9 212 aa6.82□□□□□ -1.32
CCNT1-202ENST00000417344 FAM187AA6NFU0 413 aa6.82□□□□□ -1.32
CCNT1-202ENST00000417344 KIAA0391O15091 583 aaKnown RBP6.82□□□□□ -1.32
CCNT1-202ENST00000417344 OR6B1O95007 311 aa6.82□□□□□ -1.32
CCNT1-202ENST00000417344 ALDH2P05091 517 aa6.82□□□□□ -1.32
CCNT1-202ENST00000417344 FAM228BP0C875 321 aa6.82□□□□□ -1.32
CCNT1-202ENST00000417344 TAC1P20366 129 aa6.82□□□□□ -1.32
CCNT1-202ENST00000417344 LONP1P36776 959 aaKnown RBP6.82□□□□□ -1.32
CCNT1-202ENST00000417344 PPP1R2P41236 205 aa6.82□□□□□ -1.32
CCNT1-202ENST00000417344 GRIA2P42262 883 aa6.82□□□□□ -1.32
CCNT1-202ENST00000417344 SERPINB8P50452 374 aa6.82□□□□□ -1.32
CCNT1-202ENST00000417344 DRG2P55039 364 aaKnown RBP6.82□□□□□ -1.32
CCNT1-202ENST00000417344 PTENP60484 403 aa6.82□□□□□ -1.32
CCNT1-202ENST00000417344 MAP3K10Q02779 954 aa6.82□□□□□ -1.32
CCNT1-202ENST00000417344 STRN3Q13033 797 aa6.82□□□□□ -1.32
CCNT1-202ENST00000417344 PPP2R5EQ16537 467 aa6.82□□□□□ -1.32
CCNT1-202ENST00000417344 TAF1BQ53T94 588 aaPredicted RBP6.82□□□□□ -1.32
CCNT1-202ENST00000417344 NAALADL2Q58DX5 795 aa6.82□□□□□ -1.32
CCNT1-202ENST00000417344 SPRYD7Q5W111 196 aa6.82□□□□□ -1.32
CCNT1-202ENST00000417344 LRRC8BQ6P9F7 803 aa6.82□□□□□ -1.32
CCNT1-202ENST00000417344 TRIM67Q6ZTA4 783 aa6.82□□□□□ -1.32
CCNT1-202ENST00000417344 ACAD11Q709F0 780 aa6.82□□□□□ -1.32
CCNT1-202ENST00000417344 PEX26Q7Z412 305 aa6.82□□□□□ -1.32
CCNT1-202ENST00000417344 TRIM50Q86XT4 487 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms