RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 A0A0D9SFI3 127 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 IPO5O00410 1097 aaKnown RBP6.94□□□□□ -1.3
LMBR1-204ENST00000415428 SYN3O14994 580 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 TBX3O15119 743 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 ATG13O75143 517 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 PSAPP07602 524 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 APOBRQ0VD83 1088 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 USP41Q3LFD5 358 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 DHX32Q7L7V1 743 aaKnown RBP6.94□□□□□ -1.3
LMBR1-204ENST00000415428 TRIM50Q86XT4 487 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 CCDC60Q8IWA6 550 aaPredicted RBP6.94□□□□□ -1.3
LMBR1-204ENST00000415428 CLSTN3Q9BQT9 956 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 CCDC113Q9H0I3 377 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 KIF9Q9HAQ2 790 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 CAPN10Q9HC96 672 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 DNMT3BQ9UBC3 853 aaKnown RBP6.94□□□□□ -1.3
LMBR1-204ENST00000415428 PCDHA6Q9UN73 950 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 LHX6Q9UPM6 363 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 PCDHA8Q9Y5H6 950 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 RAI2Q9Y5P3 530 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 OTOGLQ3ZCN5 2332 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 BRWD1Q9NSI6 2320 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.94□□□□□ -1.3
LMBR1-204ENST00000415428 PSMD10O75832 226 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 CTSHP09668 335 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 LMAN2Q12907 356 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 PLD1Q13393 1074 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 PLK5Q496M5 336 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 TMPRSS7Q7RTY8 843 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 KCTD17Q8N5Z5 321 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 IRF7Q92985 503 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 PHF20Q9BVI0 1012 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 COLEC11Q9BWP8 271 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 GCOM2Q9BZD3 368 aaPredicted RBP6.94□□□□□ -1.3
LMBR1-204ENST00000415428 RBM28Q9NW13 759 aaKnown RBP6.94□□□□□ -1.3
LMBR1-204ENST00000415428 FBXL21Q9UKT6 434 aa6.94□□□□□ -1.3
LMBR1-204ENST00000415428 U3KPZ7 1027 aaPredicted RBP6.94□□□□□ -1.3
LMBR1-204ENST00000415428 FAM170BA6NMN3 283 aa6.93□□□□□ -1.3
LMBR1-204ENST00000415428 DDX11L8A8MPP1 907 aa6.93□□□□□ -1.3
LMBR1-204ENST00000415428 UPP2O95045 317 aa6.93□□□□□ -1.3
LMBR1-204ENST00000415428 SKOR1P84550 965 aa6.93□□□□□ -1.3
LMBR1-204ENST00000415428 ECM1Q16610 540 aa6.93□□□□□ -1.3
LMBR1-204ENST00000415428 TMTC3Q6ZXV5 915 aa6.93□□□□□ -1.3
LMBR1-204ENST00000415428 TMC7Q7Z402 723 aa6.93□□□□□ -1.3
LMBR1-204ENST00000415428 SNIP1Q8TAD8 396 aaKnown RBP6.93□□□□□ -1.3
LMBR1-204ENST00000415428 SEC62Q99442 399 aaKnown RBP6.93□□□□□ -1.3
LMBR1-204ENST00000415428 ANTXR2P58335 489 aa6.93□□□□□ -1.3
LMBR1-204ENST00000415428 CEP76Q8TAP6 659 aa6.93□□□□□ -1.3
LMBR1-204ENST00000415428 C2orf15Q8WU43 125 aaKnown RBP6.93□□□□□ -1.3
LMBR1-204ENST00000415428 FGF13Q92913 245 aa6.93□□□□□ -1.3
LMBR1-204ENST00000415428 ZDHHC5Q9C0B5 715 aa6.93□□□□□ -1.3
LMBR1-204ENST00000415428 AZI2Q9H6S1 392 aa6.93□□□□□ -1.3
LMBR1-204ENST00000415428 URODP06132 367 aa6.93□□□□□ -1.3
LMBR1-204ENST00000415428 CXCL12P48061 93 aa6.93□□□□□ -1.3
LMBR1-204ENST00000415428 FAM117BQ6P1L5 589 aa6.93□□□□□ -1.3
LMBR1-204ENST00000415428 GLB1LQ6UWU2 654 aa6.93□□□□□ -1.3
LMBR1-204ENST00000415428 VITQ6UXI7 678 aa6.93□□□□□ -1.3
LMBR1-204ENST00000415428 ZNF589Q86UQ0 364 aaPredicted RBP6.93□□□□□ -1.3
LMBR1-204ENST00000415428 BARHL2Q9NY43 387 aa6.93□□□□□ -1.3
LMBR1-204ENST00000415428 PCDHA10Q9Y5I2 948 aa6.93□□□□□ -1.3
LMBR1-204ENST00000415428 C1QTNF9BB2RNN3 333 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 C1QTNF9P0C862 333 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 RPL17P18621 184 aaKnown RBP6.92□□□□□ -1.3
LMBR1-204ENST00000415428 TMOD1P28289 359 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 PDE1AP54750 535 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 GPC5P78333 572 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 CYB5R4Q7L1T6 521 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 FLCNQ8NFG4 579 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 LEO1Q8WVC0 666 aaPredicted RBP6.92□□□□□ -1.3
LMBR1-204ENST00000415428 CUL5Q93034 780 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 PIGSQ96S52 555 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 PLA2G2FQ9BZM2 168 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 HCSTQ9UBK5 93 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 ADAMTS9Q9P2N4 1935 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 NCANO14594 1321 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 SF3B1O75533 1304 aaKnown RBP eCLIP6.92□□□□□ -1.34e-7■■■■■ 142.3
LMBR1-204ENST00000415428 SH2B2O14492 632 aaPredicted RBP6.92□□□□□ -1.3
LMBR1-204ENST00000415428 SDSP20132 328 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 KIF5BP33176 963 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 ARL2P36404 184 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 SMARCB1Q12824 385 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 XKR3Q5GH77 459 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 HELQQ8TDG4 1101 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 SMG7Q92540 1137 aaKnown RBP6.92□□□□□ -1.3
LMBR1-204ENST00000415428 PPP1R10Q96QC0 940 aaKnown RBP6.92□□□□□ -1.3
LMBR1-204ENST00000415428 RSAD1Q9HA92 442 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.92□□□□□ -1.3
LMBR1-204ENST00000415428 MYO10Q9HD67 2058 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 ALDH2P05091 517 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 KCNE1P15382 129 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 ZSCAN20P17040 1043 aaPredicted RBP6.92□□□□□ -1.3
LMBR1-204ENST00000415428 SATB1Q01826 763 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 PDE4CQ08493 712 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 C4orf19Q8IY42 314 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 ETNPPLQ8TBG4 499 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 ZCCHC14Q8WYQ9 949 aaKnown RBP6.92□□□□□ -1.3
LMBR1-204ENST00000415428 RRP36Q96EU6 259 aaKnown RBP6.92□□□□□ -1.3
LMBR1-204ENST00000415428 FOXQ1Q9C009 403 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 CCSER1Q9C0I3 900 aa6.92□□□□□ -1.3
LMBR1-204ENST00000415428 TEX51A0A1B0GUA7 166 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms