RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 SNX29Q8TEQ0 813 aa24.68■■□□□ 1.54
MSH6-202ENST00000411819 KIF3AQ9Y496 699 aa24.68■■□□□ 1.54
MSH6-202ENST00000411819 MUC6Q6W4X9 2439 aa24.67■■□□□ 1.54
MSH6-202ENST00000411819 ST18O60284 1047 aa24.67■■□□□ 1.54
MSH6-202ENST00000411819 PRKCBP05771 671 aa24.67■■□□□ 1.54
MSH6-202ENST00000411819 MUTP22033 750 aa24.67■■□□□ 1.54
MSH6-202ENST00000411819 U2AF2P26368 475 aaKnown RBP eCLIP24.67■■□□□ 1.542e-9■■■■■ 28.4
MSH6-202ENST00000411819 NAMPTP43490 491 aa24.67■■□□□ 1.54
MSH6-202ENST00000411819 GRIK3Q13003 919 aa24.67■■□□□ 1.54
MSH6-202ENST00000411819 ECM1Q16610 540 aa24.67■■□□□ 1.54
MSH6-202ENST00000411819 PTPN21Q16825 1174 aa24.67■■□□□ 1.54
MSH6-202ENST00000411819 KIAA1841Q6NSI8 718 aa24.67■■□□□ 1.54
MSH6-202ENST00000411819 TMC5Q6UXY8 1006 aa24.67■■□□□ 1.54
MSH6-202ENST00000411819 FBXL18Q96ME1 805 aa24.67■■□□□ 1.54
MSH6-202ENST00000411819 RAB34Q9BZG1 259 aa24.67■■□□□ 1.54
MSH6-202ENST00000411819 BHMT2Q9H2M3 363 aa24.67■■□□□ 1.54
MSH6-202ENST00000411819 SFXN1Q9H9B4 322 aa24.67■■□□□ 1.54
MSH6-202ENST00000411819 PCDHB6Q9Y5E3 794 aa24.67■■□□□ 1.54
MSH6-202ENST00000411819 C2CD4DB7Z1M9 353 aa24.66■■□□□ 1.54
MSH6-202ENST00000411819 F8W810 466 aa24.66■■□□□ 1.54
MSH6-202ENST00000411819 N4BP3O15049 544 aa24.66■■□□□ 1.54
MSH6-202ENST00000411819 GLUD2P49448 558 aa24.66■■□□□ 1.54
MSH6-202ENST00000411819 CLCN4P51793 760 aa24.66■■□□□ 1.54
MSH6-202ENST00000411819 PTGDRQ13258 359 aa24.66■■□□□ 1.54
MSH6-202ENST00000411819 PRPF4BQ13523 1007 aaKnown RBP24.66■■□□□ 1.54
MSH6-202ENST00000411819 PPP2R5AQ15172 486 aa24.66■■□□□ 1.54
MSH6-202ENST00000411819 MAPK6Q16659 721 aa24.66■■□□□ 1.54
MSH6-202ENST00000411819 ATAT1Q5SQI0 421 aa24.66■■□□□ 1.54
MSH6-202ENST00000411819 C4orf32Q8N8J7 132 aa24.66■■□□□ 1.54
MSH6-202ENST00000411819 PBXIP1Q96AQ6 731 aa24.66■■□□□ 1.54
MSH6-202ENST00000411819 COLEC11Q9BWP8 271 aa24.66■■□□□ 1.54
MSH6-202ENST00000411819 FZD8Q9H461 694 aa24.66■■□□□ 1.54
MSH6-202ENST00000411819 KIAA1024Q9UPX6 916 aa24.66■■□□□ 1.54
MSH6-202ENST00000411819 SSX2IPQ9Y2D8 614 aa24.66■■□□□ 1.54
MSH6-202ENST00000411819 PLXNA3P51805 1871 aa24.66■■□□□ 1.54
MSH6-202ENST00000411819 ZNF318Q5VUA4 2279 aa24.65■■□□□ 1.54
MSH6-202ENST00000411819 TTLL13PA6NNM8 815 aa24.65■■□□□ 1.54
MSH6-202ENST00000411819 SIGLEC14Q08ET2 396 aa24.65■■□□□ 1.54
MSH6-202ENST00000411819 FAM187BQ17R55 369 aa24.65■■□□□ 1.54
MSH6-202ENST00000411819 MCTP1Q6DN14 999 aa24.65■■□□□ 1.54
MSH6-202ENST00000411819 TAS1R1Q7RTX1 841 aa24.65■■□□□ 1.54
MSH6-202ENST00000411819 DENND4AQ7Z401 1863 aa24.65■■□□□ 1.54
MSH6-202ENST00000411819 TDRD5Q8NAT2 981 aaKnown RBP24.65■■□□□ 1.54
MSH6-202ENST00000411819 IFT74Q96LB3 600 aa24.65■■□□□ 1.54
MSH6-202ENST00000411819 ADPGKQ9BRR6 497 aa24.65■■□□□ 1.54
MSH6-202ENST00000411819 KIFC3Q9BVG8 833 aa24.65■■□□□ 1.54
MSH6-202ENST00000411819 PDZD7Q9H5P4 517 aa24.65■■□□□ 1.54
MSH6-202ENST00000411819 POLD4Q9HCU8 107 aa24.65■■□□□ 1.54
MSH6-202ENST00000411819 DDX19AQ9NUU7 478 aaKnown RBP24.65■■□□□ 1.54
MSH6-202ENST00000411819 ZMYM2Q9UBW7 1377 aa24.65■■□□□ 1.54
MSH6-202ENST00000411819 C2orf16Q68DN1 1984 aa24.64■■□□□ 1.54
MSH6-202ENST00000411819 LILRB3O75022 631 aa24.64■■□□□ 1.54
MSH6-202ENST00000411819 ADH1AP07327 375 aa24.64■■□□□ 1.54
MSH6-202ENST00000411819 TOB1P50616 345 aaPredicted RBP24.64■■□□□ 1.54
MSH6-202ENST00000411819 SUGP1Q8IWZ8 645 aaKnown RBP24.64■■□□□ 1.54
MSH6-202ENST00000411819 GSTCDQ8NEC7 633 aa24.64■■□□□ 1.54
MSH6-202ENST00000411819 RABGGTAQ92696 567 aa24.64■■□□□ 1.54
MSH6-202ENST00000411819 UPF2Q9HAU5 1272 aaKnown RBP24.64■■□□□ 1.54
MSH6-202ENST00000411819 USP20Q9Y2K6 914 aa24.64■■□□□ 1.54
MSH6-202ENST00000411819 STK24Q9Y6E0 443 aa24.64■■□□□ 1.54
MSH6-202ENST00000411819 FUT10Q6P4F1 479 aa24.63■■□□□ 1.53
MSH6-202ENST00000411819 IGSF22Q8N9C0 903 aa24.63■■□□□ 1.53
MSH6-202ENST00000411819 FEZF2Q8TBJ5 459 aa24.63■■□□□ 1.53
MSH6-202ENST00000411819 KIFAP3Q92845 792 aa24.63■■□□□ 1.53
MSH6-202ENST00000411819 CCDC113Q9H0I3 377 aa24.63■■□□□ 1.53
MSH6-202ENST00000411819 MAN1C1Q9NR34 630 aa24.63■■□□□ 1.53
MSH6-202ENST00000411819 SNTG2Q9NY99 539 aa24.63■■□□□ 1.53
MSH6-202ENST00000411819 TRIOO75962 3097 aa24.63■■□□□ 1.53
MSH6-202ENST00000411819 PP2D1A8MPX8 630 aa24.62■■□□□ 1.53
MSH6-202ENST00000411819 ACKR2O00590 384 aa24.62■■□□□ 1.53
MSH6-202ENST00000411819 TEX28O15482 410 aa24.62■■□□□ 1.53
MSH6-202ENST00000411819 PDIA5Q14554 519 aa24.62■■□□□ 1.53
MSH6-202ENST00000411819 KRT79Q5XKE5 535 aa24.62■■□□□ 1.53
MSH6-202ENST00000411819 BMP8AQ7Z5Y6 402 aa24.62■■□□□ 1.53
MSH6-202ENST00000411819 RNF168Q8IYW5 571 aaPredicted RBP24.62■■□□□ 1.53
MSH6-202ENST00000411819 KREMEN2Q8NCW0 462 aa24.62■■□□□ 1.53
MSH6-202ENST00000411819 B3GALT6Q96L58 329 aa24.62■■□□□ 1.53
MSH6-202ENST00000411819 CACNG4Q9UBN1 327 aa24.62■■□□□ 1.53
MSH6-202ENST00000411819 ADAM28Q9UKQ2 775 aa24.62■■□□□ 1.53
MSH6-202ENST00000411819 LAD1O00515 517 aa24.61■■□□□ 1.53
MSH6-202ENST00000411819 RECQL4O94761 1208 aa24.61■■□□□ 1.53
MSH6-202ENST00000411819 GLUD1P00367 558 aa24.61■■□□□ 1.53
MSH6-202ENST00000411819 EDN1P05305 212 aa24.61■■□□□ 1.53
MSH6-202ENST00000411819 MYBP10242 640 aa24.61■■□□□ 1.53
MSH6-202ENST00000411819 DSG1Q02413 1049 aa24.61■■□□□ 1.53
MSH6-202ENST00000411819 ELMSAN1Q6PJG2 1045 aa24.61■■□□□ 1.53
MSH6-202ENST00000411819 CCDC149Q6ZUS6 474 aa24.61■■□□□ 1.53
MSH6-202ENST00000411819 GPR149Q86SP6 731 aa24.61■■□□□ 1.53
MSH6-202ENST00000411819 TMX3Q96JJ7 454 aa24.61■■□□□ 1.53
MSH6-202ENST00000411819 MYO10Q9HD67 2058 aa24.6■■□□□ 1.53
MSH6-202ENST00000411819 CASTOR2A6NHX0 329 aa24.6■■□□□ 1.53
MSH6-202ENST00000411819 E9PMD0 336 aa24.6■■□□□ 1.53
MSH6-202ENST00000411819 TADA2AO75478 443 aa24.6■■□□□ 1.53
MSH6-202ENST00000411819 TUSC3Q13454 348 aa24.6■■□□□ 1.53
MSH6-202ENST00000411819 MTMR3Q13615 1198 aa24.6■■□□□ 1.53
MSH6-202ENST00000411819 HSP90AA2PQ14568 343 aaPredicted RBP24.6■■□□□ 1.53
MSH6-202ENST00000411819 USP41Q3LFD5 358 aa24.6■■□□□ 1.53
MSH6-202ENST00000411819 KIAA0319Q5VV43 1072 aa24.6■■□□□ 1.53
MSH6-202ENST00000411819 EEF1DP3Q658K8 133 aa24.6■■□□□ 1.53
MSH6-202ENST00000411819 DTHD1Q6ZMT9 781 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms