RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 MARCH11A6NNE9 402 aa-0.81□□□□□ -2.54
RNU4-88P-201ENST00000411220 NPHS1O60500 1241 aa-0.81□□□□□ -2.54
RNU4-88P-201ENST00000411220 PRKCSHP14314 528 aaPredicted RBP-0.81□□□□□ -2.54
RNU4-88P-201ENST00000411220 KIR3DL2P43630 455 aa-0.81□□□□□ -2.54
RNU4-88P-201ENST00000411220 DPP8Q6V1X1 898 aaPredicted RBP-0.81□□□□□ -2.54
RNU4-88P-201ENST00000411220 ZNF497Q6ZNH5 498 aa-0.81□□□□□ -2.54
RNU4-88P-201ENST00000411220 STXBP4Q6ZWJ1 553 aa-0.81□□□□□ -2.54
RNU4-88P-201ENST00000411220 ZNF771Q7L3S4 317 aaPredicted RBP-0.81□□□□□ -2.54
RNU4-88P-201ENST00000411220 LRP11Q86VZ4 500 aa-0.81□□□□□ -2.54
RNU4-88P-201ENST00000411220 SLC15A3Q8IY34 581 aa-0.81□□□□□ -2.54
RNU4-88P-201ENST00000411220 TYMSOSQ8TAI1 123 aa-0.81□□□□□ -2.54
RNU4-88P-201ENST00000411220 FCRL3Q96P31 734 aaPredicted RBP-0.81□□□□□ -2.54
RNU4-88P-201ENST00000411220 MVB12BQ9H7P6 319 aa-0.81□□□□□ -2.54
RNU4-88P-201ENST00000411220 PRM3Q9NNZ6 103 aa-0.81□□□□□ -2.54
RNU4-88P-201ENST00000411220 PRDM8Q9NQV8 689 aa-0.81□□□□□ -2.54
RNU4-88P-201ENST00000411220 FNIP2Q9P278 1114 aa-0.81□□□□□ -2.54
RNU4-88P-201ENST00000411220 FBXO10Q9UK96 956 aa-0.81□□□□□ -2.54
RNU4-88P-201ENST00000411220 PCDHB6Q9Y5E3 794 aa-0.81□□□□□ -2.54
RNU4-88P-201ENST00000411220 PCDHB4Q9Y5E5 795 aa-0.81□□□□□ -2.54
RNU4-88P-201ENST00000411220 NBEAL2Q6ZNJ1 2754 aa-0.81□□□□□ -2.54
RNU4-88P-201ENST00000411220 CACNA1GO43497 2377 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 MEIOCA2RUB1 952 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 KRTAP16-1A8MUX0 517 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 ENC1O14682 589 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 EDIL3O43854 480 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 GADD45BO75293 160 aaPredicted RBP-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 THBDP07204 575 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 CFC1BP0CG36 223 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 CFC1P0CG37 223 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 SRSF2Q01130 221 aaKnown RBP-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 PMP22Q01453 160 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 LTBQ06643 244 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 PROSER3Q2NL68 480 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 WDR72Q3MJ13 1102 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 KRTAP13-2Q52LG2 175 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 TCTE1Q5JU00 501 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 C10orf25Q5T742 122 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 MROH9Q5TGP6 573 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 PPFIBP1Q86W92 1011 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 LILRB2Q8N423 598 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 ANKRD52Q8NB46 1076 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 PJA1Q8NG27 643 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 FAM222BQ8WU58 562 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 RPL10LQ96L21 214 aaKnown RBP-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 DUX3Q96PT4 197 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 KIF2CQ99661 725 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 NTPCRQ9BSD7 190 aaKnown RBP-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 TRMT61BQ9BVS5 477 aaKnown RBP-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 C6orf106Q9H6K1 298 aaPredicted RBP-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 TBCCD1Q9NVR7 557 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 POLIQ9UNA4 740 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 SHANK1Q9Y566 2161 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 COL1A1P02452 1464 aaPredicted RBP-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 ABCA7Q8IZY2 2146 aa-0.82□□□□□ -2.54
RNU4-88P-201ENST00000411220 EPG5Q9HCE0 2579 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 ZNF462Q96JM2 2506 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 ARID1AO14497 2285 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 COL5A2P05997 1499 aaPredicted RBP-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 C22orf46C9J442 243 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 B4GALT2O60909 372 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 TULP3O75386 442 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 ENO2P09104 434 aaPredicted RBP-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 PKMP14618 531 aaKnown RBP-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 IFNGR1P15260 489 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 ZSCAN20P17040 1043 aaPredicted RBP-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 PLCG1P19174 1290 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 SSFA2P28290 1259 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 PTGDSP41222 190 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 ADCY7P51828 1080 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 EPHA5P54756 1037 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 SOX8P57073 446 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 PFKPQ01813 784 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 TLE4Q04727 773 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 METTL24Q5JXM2 366 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 EEF1DP3Q658K8 133 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 TMEM64Q6YI46 380 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 APBB1IPQ7Z5R6 666 aaPredicted RBP-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 ARHGAP30Q7Z6I6 1101 aaPredicted RBP-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 RIOX2Q8IUF8 465 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 FBXL14Q8N1E6 418 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 ZC3H10Q96K80 434 aaKnown RBP-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 GPHA2Q96T91 129 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 TEX101Q9BY14 249 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 SPON1Q9HCB6 807 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 SERGEFQ9UGK8 458 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 FBXL21Q9UKT6 434 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 DMTF1Q9Y222 760 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 AKAP2Q9Y2D5 859 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 MAP3K2Q9Y2U5 619 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 PCDHB12Q9Y5F1 795 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 ZHX2Q9Y6X8 837 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 TGP01266 2768 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 GPR179Q6PRD1 2367 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 NBEAL1Q6ZS30 2694 aa-0.83□□□□□ -2.54
RNU4-88P-201ENST00000411220 SDK1Q7Z5N4 2213 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 USP9XQ93008 2570 aaPredicted RBP-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 DENND3A2RUS2 1198 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 SMTNL1A8MU46 457 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 TISP43B9A030 160 aa-0.84□□□□□ -2.54
RNU4-88P-201ENST00000411220 DIRC3C9JPN6 131 aa-0.84□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms