RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.17■□□□□ 0.5
SUMO1-208ENST00000409627 ECHDC2Q86YB7 292 aa18.17■□□□□ 0.5
SUMO1-208ENST00000409627 C12orf56Q8IXR9 622 aa18.17■□□□□ 0.5
SUMO1-208ENST00000409627 SMG8Q8ND04 991 aaKnown RBP18.17■□□□□ 0.5
SUMO1-208ENST00000409627 DHTKD1Q96HY7 919 aaPredicted RBP18.17■□□□□ 0.5
SUMO1-208ENST00000409627 HAPLN2Q9GZV7 340 aa18.17■□□□□ 0.5
SUMO1-208ENST00000409627 AGPAT3Q9NRZ7 376 aa18.17■□□□□ 0.5
SUMO1-208ENST00000409627 TRAF3IP3Q9Y228 551 aa18.17■□□□□ 0.5
SUMO1-208ENST00000409627 IPPQ9Y573 584 aa18.17■□□□□ 0.5
SUMO1-208ENST00000409627 ZBBXA8MT70 800 aa18.16■□□□□ 0.5
SUMO1-208ENST00000409627 KIAA0391O15091 583 aaKnown RBP18.16■□□□□ 0.5
SUMO1-208ENST00000409627 CALUO43852 315 aaPredicted RBP18.16■□□□□ 0.5
SUMO1-208ENST00000409627 EOMESO95936 686 aa18.16■□□□□ 0.5
SUMO1-208ENST00000409627 MATR3P43243 847 aaKnown RBP eCLIP18.16■□□□□ 0.5
SUMO1-208ENST00000409627 DPCR1Q3MIW9 517 aa18.16■□□□□ 0.5
SUMO1-208ENST00000409627 C9orf50Q5SZB4 431 aa18.16■□□□□ 0.5
SUMO1-208ENST00000409627 CENPPQ6IPU0 288 aa18.16■□□□□ 0.5
SUMO1-208ENST00000409627 ARMCX5Q6P1M9 558 aa18.16■□□□□ 0.5
SUMO1-208ENST00000409627 MRPL10Q7Z7H8 261 aaKnown RBP18.16■□□□□ 0.5
SUMO1-208ENST00000409627 ZBTB33Q86T24 672 aa18.16■□□□□ 0.5
SUMO1-208ENST00000409627 ZNF598Q86UK7 904 aaKnown RBP18.16■□□□□ 0.5
SUMO1-208ENST00000409627 NPAS4Q8IUM7 802 aa18.16■□□□□ 0.5
SUMO1-208ENST00000409627 HACE1Q8IYU2 909 aa18.16■□□□□ 0.5
SUMO1-208ENST00000409627 CRIPAKQ8N1N5 446 aa18.16■□□□□ 0.5
SUMO1-208ENST00000409627 TMEM174Q8WUU8 243 aa18.16■□□□□ 0.5
SUMO1-208ENST00000409627 POMGNT1Q8WZA1 660 aa18.16■□□□□ 0.5
SUMO1-208ENST00000409627 MSTO1Q9BUK6 570 aa18.16■□□□□ 0.5
SUMO1-208ENST00000409627 SEMA6BQ9H3T3 888 aa18.16■□□□□ 0.5
SUMO1-208ENST00000409627 TMEM161AQ9NX61 479 aa18.16■□□□□ 0.5
SUMO1-208ENST00000409627 CXXC1Q9P0U4 656 aaPredicted RBP18.16■□□□□ 0.5
SUMO1-208ENST00000409627 DACH1Q9UI36 760 aa18.16■□□□□ 0.5
SUMO1-208ENST00000409627 CITO14578 2027 aa18.16■□□□□ 0.5
SUMO1-208ENST00000409627 OGTO15294 1046 aa18.15■□□□□ 0.5
SUMO1-208ENST00000409627 STAG3L1P0CL83 205 aa18.15■□□□□ 0.5
SUMO1-208ENST00000409627 HARSP12081 509 aaKnown RBP18.15■□□□□ 0.5
SUMO1-208ENST00000409627 ATF7P17544 494 aaPredicted RBP18.15■□□□□ 0.5
SUMO1-208ENST00000409627 CCNE1P24864 410 aa18.15■□□□□ 0.5
SUMO1-208ENST00000409627 GRM5P41594 1212 aa18.15■□□□□ 0.5
SUMO1-208ENST00000409627 DEFB103AP81534 67 aa18.15■□□□□ 0.5
SUMO1-208ENST00000409627 SHHQ15465 462 aa18.15■□□□□ 0.5
SUMO1-208ENST00000409627 STX1AQ16623 288 aa18.15■□□□□ 0.5
SUMO1-208ENST00000409627 NFIL3Q16649 462 aa18.15■□□□□ 0.5
SUMO1-208ENST00000409627 KYAT1Q16773 422 aa18.15■□□□□ 0.5
SUMO1-208ENST00000409627 EDRF1Q3B7T1 1238 aa18.15■□□□□ 0.5
SUMO1-208ENST00000409627 FOXR2Q6PJQ5 311 aa18.15■□□□□ 0.5
SUMO1-208ENST00000409627 SLC9A9Q8IVB4 645 aa18.15■□□□□ 0.5
SUMO1-208ENST00000409627 P2RX5Q93086 422 aa18.15■□□□□ 0.5
SUMO1-208ENST00000409627 PGBD4Q96DM1 585 aa18.15■□□□□ 0.5
SUMO1-208ENST00000409627 SLC9A7Q96T83 725 aa18.15■□□□□ 0.5
SUMO1-208ENST00000409627 CBWD1Q9BRT8 395 aa18.15■□□□□ 0.5
SUMO1-208ENST00000409627 NXF3Q9H4D5 531 aaKnown RBP18.15■□□□□ 0.5
SUMO1-208ENST00000409627 ANO10Q9NW15 660 aa18.15■□□□□ 0.5
SUMO1-208ENST00000409627 AGO2Q9UKV8 859 aaKnown RBP18.15■□□□□ 0.5
SUMO1-208ENST00000409627 CEP290O15078 2479 aa18.14■□□□□ 0.5
SUMO1-208ENST00000409627 PDCD11Q14690 1871 aaKnown RBP18.14■□□□□ 0.49
SUMO1-208ENST00000409627 FNDC1Q4ZHG4 1894 aaPredicted RBP18.14■□□□□ 0.49
SUMO1-208ENST00000409627 SYCE3A1L190 88 aa18.14■□□□□ 0.49
SUMO1-208ENST00000409627 FAM189A1O60320 539 aa18.14■□□□□ 0.49
SUMO1-208ENST00000409627 LRRC63Q05C16 580 aa18.14■□□□□ 0.49
SUMO1-208ENST00000409627 TYRO3Q06418 890 aa18.14■□□□□ 0.49
SUMO1-208ENST00000409627 PAK1Q13153 545 aa18.14■□□□□ 0.49
SUMO1-208ENST00000409627 MYBPC2Q14324 1141 aa18.14■□□□□ 0.49
SUMO1-208ENST00000409627 ZSCAN23Q3MJ62 389 aa18.14■□□□□ 0.49
SUMO1-208ENST00000409627 CT47A1Q5JQC4 288 aaPredicted RBP18.14■□□□□ 0.49
SUMO1-208ENST00000409627 KLHL10Q6JEL2 608 aa18.14■□□□□ 0.49
SUMO1-208ENST00000409627 PHOSPHO2Q8TCD6 241 aa18.14■□□□□ 0.49
SUMO1-208ENST00000409627 NELFBQ8WX92 580 aa18.14■□□□□ 0.49
SUMO1-208ENST00000409627 TOP1MTQ969P6 601 aa18.14■□□□□ 0.49
SUMO1-208ENST00000409627 RNPC3Q96LT9 517 aaKnown RBP18.14■□□□□ 0.49
SUMO1-208ENST00000409627 TSG101Q99816 390 aa18.14■□□□□ 0.49
SUMO1-208ENST00000409627 HSPBP1Q9NZL4 362 aa18.14■□□□□ 0.49
SUMO1-208ENST00000409627 LRFN2Q9ULH4 789 aa18.14■□□□□ 0.49
SUMO1-208ENST00000409627 CTNND2Q9UQB3 1225 aa18.14■□□□□ 0.49
SUMO1-208ENST00000409627 PCDHB7Q9Y5E2 793 aa18.14■□□□□ 0.49
SUMO1-208ENST00000409627 SLC4A7Q9Y6M7 1214 aa18.14■□□□□ 0.49
SUMO1-208ENST00000409627 ANK1P16157 1881 aa18.14■□□□□ 0.49
SUMO1-208ENST00000409627 BICDL2A1A5D9 508 aa18.13■□□□□ 0.49
SUMO1-208ENST00000409627 CLIC2O15247 247 aa18.13■□□□□ 0.49
SUMO1-208ENST00000409627 LDHAP00338 332 aaKnown RBP18.13■□□□□ 0.49
SUMO1-208ENST00000409627 NR3C1P04150 777 aa18.13■□□□□ 0.49
SUMO1-208ENST00000409627 ITGA4P13612 1032 aa18.13■□□□□ 0.49
SUMO1-208ENST00000409627 HSP90AA2PQ14568 343 aaPredicted RBP18.13■□□□□ 0.49
SUMO1-208ENST00000409627 THNSL1Q8IYQ7 743 aa18.13■□□□□ 0.49
SUMO1-208ENST00000409627 CEP120Q8N960 986 aa18.13■□□□□ 0.49
SUMO1-208ENST00000409627 FUCA2Q9BTY2 467 aa18.13■□□□□ 0.49
SUMO1-208ENST00000409627 CCDC94Q9BW85 323 aaPredicted RBP18.13■□□□□ 0.49
SUMO1-208ENST00000409627 PRO3102Q9H379 93 aa18.13■□□□□ 0.49
SUMO1-208ENST00000409627 PCIF1Q9H4Z3 704 aa18.13■□□□□ 0.49
SUMO1-208ENST00000409627 UBN1Q9NPG3 1134 aa18.13■□□□□ 0.49
SUMO1-208ENST00000409627 DMAC2Q9NW81 257 aa18.13■□□□□ 0.49
SUMO1-208ENST00000409627 HES2Q9Y543 173 aa18.13■□□□□ 0.49
SUMO1-208ENST00000409627 COL4A6Q14031 1691 aa18.12■□□□□ 0.49
SUMO1-208ENST00000409627 GBF1Q92538 1859 aa18.12■□□□□ 0.49
SUMO1-208ENST00000409627 TRIP11Q15643 1979 aa18.12■□□□□ 0.49
SUMO1-208ENST00000409627 HOXA2O43364 376 aa18.12■□□□□ 0.49
SUMO1-208ENST00000409627 EXTL3O43909 919 aa18.12■□□□□ 0.49
SUMO1-208ENST00000409627 CLTAP09496 248 aa18.12■□□□□ 0.49
SUMO1-208ENST00000409627 CCDC192P0DO97 292 aa18.12■□□□□ 0.49
SUMO1-208ENST00000409627 RPL13P26373 211 aaKnown RBP18.12■□□□□ 0.49
SUMO1-208ENST00000409627 ERCC5P28715 1186 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms