RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 MAP3K7O43318 606 aa15.36■□□□□ 0.05
GABPA-202ENST00000400075 ATP2C2O75185 946 aa15.36■□□□□ 0.05
GABPA-202ENST00000400075 CA4P22748 312 aa15.36■□□□□ 0.05
GABPA-202ENST00000400075 SEMA3FQ13275 785 aa15.36■□□□□ 0.05
GABPA-202ENST00000400075 IKBKEQ14164 716 aa15.36■□□□□ 0.05
GABPA-202ENST00000400075 MFSD10Q14728 455 aa15.36■□□□□ 0.05
GABPA-202ENST00000400075 KRT31Q15323 416 aa15.36■□□□□ 0.05
GABPA-202ENST00000400075 RPS6KA2Q15349 733 aa15.36■□□□□ 0.05
GABPA-202ENST00000400075 PGK1P00558 417 aa15.36■□□□□ 0.05
GABPA-202ENST00000400075 GARSP41250 739 aaKnown RBP15.36■□□□□ 0.05
GABPA-202ENST00000400075 PSEN2P49810 448 aa15.36■□□□□ 0.05
GABPA-202ENST00000400075 RHOT2Q8IXI1 618 aa15.36■□□□□ 0.05
GABPA-202ENST00000400075 ATP8B4Q8TF62 1192 aa15.36■□□□□ 0.05
GABPA-202ENST00000400075 NPHP3-ACAD11A0A0J9YXS1 232 aa15.36■□□□□ 0.05
GABPA-202ENST00000400075 TBKBP1A7MCY6 615 aa15.36■□□□□ 0.05
GABPA-202ENST00000400075 LCP1P13796 627 aa15.36■□□□□ 0.05
GABPA-202ENST00000400075 BEX3Q00994 111 aa15.36■□□□□ 0.05
GABPA-202ENST00000400075 ADCY1Q08828 1119 aa15.36■□□□□ 0.05
GABPA-202ENST00000400075 PTGISQ16647 500 aa15.36■□□□□ 0.05
GABPA-202ENST00000400075 MRPS31Q92665 395 aaKnown RBP15.36■□□□□ 0.05
GABPA-202ENST00000400075 UNC45AQ9H3U1 944 aa15.36■□□□□ 0.05
GABPA-202ENST00000400075 ANAPC7Q9UJX3 599 aa15.36■□□□□ 0.05
GABPA-202ENST00000400075 WTIPA6NIX2 430 aaPredicted RBP15.35■□□□□ 0.05
GABPA-202ENST00000400075 BASP1P80723 227 aaKnown RBP15.35■□□□□ 0.05
GABPA-202ENST00000400075 GRIK4Q16099 956 aa15.35■□□□□ 0.05
GABPA-202ENST00000400075 ANKS4BQ8N8V4 417 aa15.35■□□□□ 0.05
GABPA-202ENST00000400075 SENP7Q9BQF6 1050 aa15.35■□□□□ 0.05
GABPA-202ENST00000400075 ABI2Q9NYB9 513 aaPredicted RBP15.35■□□□□ 0.05
GABPA-202ENST00000400075 KANSL3Q9P2N6 904 aa15.35■□□□□ 0.05
GABPA-202ENST00000400075 ZBTB48P10074 688 aaPredicted RBP15.35■□□□□ 0.05
GABPA-202ENST00000400075 GLRA4Q5JXX5 417 aa15.35■□□□□ 0.05
GABPA-202ENST00000400075 GPR142Q7Z601 462 aa15.35■□□□□ 0.05
GABPA-202ENST00000400075 DNAJB3Q8WWF6 145 aa15.35■□□□□ 0.05
GABPA-202ENST00000400075 POLR3CQ9BUI4 534 aaPredicted RBP15.35■□□□□ 0.05
GABPA-202ENST00000400075 KLHL8Q9P2G9 620 aaPredicted RBP15.35■□□□□ 0.05
GABPA-202ENST00000400075 SPDYE5A6NIY4 337 aa15.35■□□□□ 0.05
GABPA-202ENST00000400075 HMBSP08397 361 aa15.35■□□□□ 0.05
GABPA-202ENST00000400075 DNAJB2P25686 324 aa15.35■□□□□ 0.05
GABPA-202ENST00000400075 NR1H3Q13133 447 aa15.35■□□□□ 0.05
GABPA-202ENST00000400075 SNRNP35Q16560 246 aaKnown RBP15.35■□□□□ 0.05
GABPA-202ENST00000400075 ERCC6LQ2NKX8 1250 aa15.35■□□□□ 0.05
GABPA-202ENST00000400075 N4BP2L2Q92802 583 aaPredicted RBP15.35■□□□□ 0.05
GABPA-202ENST00000400075 ATP6V1E2Q96A05 226 aa15.35■□□□□ 0.05
GABPA-202ENST00000400075 INTS2Q9H0H0 1204 aaKnown RBP15.35■□□□□ 0.05
GABPA-202ENST00000400075 DPH5Q9H2P9 285 aa15.35■□□□□ 0.05
GABPA-202ENST00000400075 SP110Q9HB58 689 aa15.35■□□□□ 0.05
GABPA-202ENST00000400075 ODC1P11926 461 aa15.34■□□□□ 0.05
GABPA-202ENST00000400075 U2AF2P26368 475 aaKnown RBP eCLIP15.34■□□□□ 0.05
GABPA-202ENST00000400075 RBL2Q08999 1139 aa15.34■□□□□ 0.05
GABPA-202ENST00000400075 DENND2CQ68D51 928 aa15.34■□□□□ 0.05
GABPA-202ENST00000400075 MOXD1Q6UVY6 613 aa15.34■□□□□ 0.05
GABPA-202ENST00000400075 C11orf57Q6ZUT1 292 aaPredicted RBP15.34■□□□□ 0.05
GABPA-202ENST00000400075 ZBTB9Q96C00 473 aa15.34■□□□□ 0.05
GABPA-202ENST00000400075 PHLPP1O60346 1717 aa15.34■□□□□ 0.05
GABPA-202ENST00000400075 MROH1Q8NDA8 1641 aa15.34■□□□□ 0.05
GABPA-202ENST00000400075 I3L4J1 428 aa15.34■□□□□ 0.05
GABPA-202ENST00000400075 TRIM72Q6ZMU5 477 aa15.34■□□□□ 0.05
GABPA-202ENST00000400075 TBC1D12O60347 775 aa15.34■□□□□ 0.05
GABPA-202ENST00000400075 THP07101 528 aa15.34■□□□□ 0.05
GABPA-202ENST00000400075 MTMR3Q13615 1198 aa15.34■□□□□ 0.05
GABPA-202ENST00000400075 NFRKBQ6P4R8 1299 aa15.34■□□□□ 0.05
GABPA-202ENST00000400075 TTC30BQ8N4P2 665 aa15.34■□□□□ 0.05
GABPA-202ENST00000400075 GPT2Q8TD30 523 aa15.34■□□□□ 0.05
GABPA-202ENST00000400075 TSC1Q92574 1164 aa15.34■□□□□ 0.05
GABPA-202ENST00000400075 IFT43Q96FT9 208 aa15.34■□□□□ 0.05
GABPA-202ENST00000400075 RUNDC3BQ96NL0 473 aa15.34■□□□□ 0.05
GABPA-202ENST00000400075 MMTAG2Q9BU76 263 aaKnown RBP15.34■□□□□ 0.05
GABPA-202ENST00000400075 NT5C1AQ9BXI3 368 aa15.34■□□□□ 0.05
GABPA-202ENST00000400075 PCSK1NQ9UHG2 260 aa15.34■□□□□ 0.05
GABPA-202ENST00000400075 ERICH4A6NGS2 130 aa15.33■□□□□ 0.05
GABPA-202ENST00000400075 CPP00450 1065 aa15.33■□□□□ 0.05
GABPA-202ENST00000400075 DRAP1Q14919 205 aaPredicted RBP15.33■□□□□ 0.05
GABPA-202ENST00000400075 SETDB1Q15047 1291 aa15.33■□□□□ 0.05
GABPA-202ENST00000400075 PGM5Q15124 567 aa15.33■□□□□ 0.05
GABPA-202ENST00000400075 SLC30A10Q6XR72 485 aa15.33■□□□□ 0.05
GABPA-202ENST00000400075 CD99L2Q8TCZ2 262 aa15.33■□□□□ 0.05
GABPA-202ENST00000400075 HVCN1Q96D96 273 aa15.33■□□□□ 0.05
GABPA-202ENST00000400075 PPP2R2CQ9Y2T4 447 aa15.33■□□□□ 0.05
GABPA-202ENST00000400075 PITPNM2Q9BZ72 1349 aa15.33■□□□□ 0.05
GABPA-202ENST00000400075 HPDP32754 393 aaPredicted RBP15.33■□□□□ 0.04
GABPA-202ENST00000400075 RHBDL3P58872 404 aa15.33■□□□□ 0.04
GABPA-202ENST00000400075 SPRYD7Q5W111 196 aa15.33■□□□□ 0.04
GABPA-202ENST00000400075 RIOX1Q9H6W3 641 aa15.33■□□□□ 0.04
GABPA-202ENST00000400075 PCDHAC2Q9Y5I4 1007 aa15.33■□□□□ 0.04
GABPA-202ENST00000400075 A0A087WZ62 844 aa15.33■□□□□ 0.04
GABPA-202ENST00000400075 ZRANB2O95218 330 aaKnown RBP eCLIP15.33■□□□□ 0.04
GABPA-202ENST00000400075 HMGCRP04035 888 aa15.33■□□□□ 0.04
GABPA-202ENST00000400075 CKMP06732 381 aa15.33■□□□□ 0.04
GABPA-202ENST00000400075 FAM110CQ1W6H9 321 aa15.33■□□□□ 0.04
GABPA-202ENST00000400075 CCDC170Q8IYT3 715 aa15.33■□□□□ 0.04
GABPA-202ENST00000400075 FDXACB1Q9BRP7 624 aaPredicted RBP15.33■□□□□ 0.04
GABPA-202ENST00000400075 HOMER3Q9NSC5 361 aa15.33■□□□□ 0.04
GABPA-202ENST00000400075 OGTO15294 1046 aa15.33■□□□□ 0.04
GABPA-202ENST00000400075 HSD17B4P51659 736 aa15.33■□□□□ 0.04
GABPA-202ENST00000400075 SNX1Q13596 522 aa15.33■□□□□ 0.04
GABPA-202ENST00000400075 FYB2Q5VWT5 728 aa15.33■□□□□ 0.04
GABPA-202ENST00000400075 CATSPER3Q86XQ3 398 aa15.33■□□□□ 0.04
GABPA-202ENST00000400075 CFAP57Q96MR6 1250 aa15.33■□□□□ 0.04
GABPA-202ENST00000400075 TMEM60Q9H2L4 133 aa15.33■□□□□ 0.04
GABPA-202ENST00000400075 SYNPO2Q9UMS6 1093 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms