RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 CXorf67Q86X51 503 aaPredicted RBP3.68□□□□□ -1.82
CD47-203ENST00000398258 PHYKPLQ8IUZ5 450 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 CMIPQ8IY22 773 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 TCEAL8Q8IYN2 117 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 BCL6BQ8N143 479 aaPredicted RBP3.68□□□□□ -1.82
CD47-203ENST00000398258 RSAD2Q8WXG1 361 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 RTF1Q92541 710 aaKnown RBP3.68□□□□□ -1.82
CD47-203ENST00000398258 MPHOSPH9Q99550 1183 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 NUP88Q99567 741 aaPredicted RBP3.68□□□□□ -1.82
CD47-203ENST00000398258 PCGF6Q9BYE7 350 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 KRTAP1-5Q9BYS1 174 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 RHOBTB2Q9BYZ6 727 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 MS4A5Q9H3V2 200 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 ZIM2Q9NZV7 527 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 MSRAQ9UJ68 235 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 TMPRSS11EQ9UL52 423 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 PROB1E7EW31 1015 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 ELL2O00472 640 aaPredicted RBP3.67□□□□□ -1.82
CD47-203ENST00000398258 PCDHGA12O60330 932 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 CD38P28907 300 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 SLC6A3Q01959 620 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 ALDH6A1Q02252 535 aaKnown RBP3.67□□□□□ -1.82
CD47-203ENST00000398258 CNGB1Q14028 1251 aaPredicted RBP3.67□□□□□ -1.82
CD47-203ENST00000398258 PCBP2Q15366 365 aaKnown RBP eCLIP3.67□□□□□ -1.82
CD47-203ENST00000398258 PTPN21Q16825 1174 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 ABCB5Q2M3G0 1257 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 TTC38Q5R3I4 469 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 FAM102BQ5T8I3 360 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 ESPNLQ6ZVH7 1005 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 OTOP2Q7RTS6 562 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 RD3Q7Z3Z2 195 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 LYSMD2Q8IV50 215 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 SLC41A1Q8IVJ1 513 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 CMTR2Q8IYT2 770 aaKnown RBP3.67□□□□□ -1.82
CD47-203ENST00000398258 CPA6Q8N4T0 437 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 ZNF276Q8N554 614 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 WDR48Q8TAF3 677 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 PROKR1Q8TCW9 393 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 MIEF2Q96C03 454 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 SMAD5Q99717 465 aaKnown RBP3.67□□□□□ -1.82
CD47-203ENST00000398258 BTBD2Q9BX70 525 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 OR10A5Q9H207 317 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 CCM2LQ9NUG4 571 aaPredicted RBP3.67□□□□□ -1.82
CD47-203ENST00000398258 PCDHGA9Q9Y5G4 932 aaKnown RBP3.67□□□□□ -1.82
CD47-203ENST00000398258 PCDHGA8Q9Y5G5 932 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 PCDHGA7Q9Y5G6 932 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 PCDHGA6Q9Y5G7 932 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 PCDHGA3Q9Y5H0 932 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 PCDHGA2Q9Y5H1 932 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 NUMBLQ9Y6R0 609 aa3.67□□□□□ -1.82
CD47-203ENST00000398258 UBA6A0AVT1 1052 aaPredicted RBP3.66□□□□□ -1.82
CD47-203ENST00000398258 LCHNA4D1U4 455 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 GOLGA8AA7E2F4 631 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 GOLGA8BA8MQT2 603 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 PFKMP08237 780 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 MYBL2P10244 700 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 ZSCAN20P17040 1043 aaPredicted RBP3.66□□□□□ -1.82
CD47-203ENST00000398258 AGXTP21549 392 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 RGS3P49796 1198 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 SCAND1P57086 179 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 MRPS9P82933 396 aaKnown RBP3.66□□□□□ -1.82
CD47-203ENST00000398258 MYBPC3Q14896 1274 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 LRRC41Q15345 812 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 RABL3Q5HYI8 236 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 ZBTB41Q5SVQ8 909 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 PRAMEF9Q5VWM5 478 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 CXorf57Q6NSI4 855 aaKnown RBP3.66□□□□□ -1.82
CD47-203ENST00000398258 KIAA1841Q6NSI8 718 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 CHPFQ8IZ52 775 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 ANKRD35Q8N283 1001 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 C7orf31Q8N865 590 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 C9orf106Q8NAJ2 232 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 CALML6Q8TD86 181 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 TSR2Q969E8 191 aaKnown RBP3.66□□□□□ -1.82
CD47-203ENST00000398258 PGBD4Q96DM1 585 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 RAX2Q96IS3 184 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 GPHA2Q96T91 129 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 GPR87Q9BY21 358 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 PITHD1Q9GZP4 211 aaPredicted RBP3.66□□□□□ -1.82
CD47-203ENST00000398258 HAPLN2Q9GZV7 340 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 TOR3AQ9H497 397 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 AASDHPPTQ9NRN7 309 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 MAGEL2Q9UJ55 1249 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 DENND2AQ9ULE3 1009 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 PNMA8BQ9ULN7 279 aaPredicted RBP3.66□□□□□ -1.82
CD47-203ENST00000398258 ANKRD6Q9Y2G4 727 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 PPP2R3BQ9Y5P8 575 aa3.66□□□□□ -1.82
CD47-203ENST00000398258 COL11A2P13942 1736 aaPredicted RBP3.66□□□□□ -1.82
CD47-203ENST00000398258 A0A0G2JNJ9 132 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 PRSS38A1L453 326 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 KLHL33A6NCF5 533 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 KIF3BO15066 747 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 H2AFYO75367 372 aaKnown RBP3.65□□□□□ -1.83
CD47-203ENST00000398258 PRPF6O94906 941 aaKnown RBP3.65□□□□□ -1.83
CD47-203ENST00000398258 SNUPNO95149 360 aaKnown RBP3.65□□□□□ -1.83
CD47-203ENST00000398258 ZRANB2O95218 330 aaKnown RBP eCLIP3.65□□□□□ -1.83
CD47-203ENST00000398258 APOL3O95236 402 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 MT-CO1P00395 513 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 U2AF1L5P0DN76 240 aaPredicted RBP3.65□□□□□ -1.83
CD47-203ENST00000398258 CDK4P11802 303 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms