RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 DOK3Q7L591 496 aa7.88□□□□□ -1.15
SNORA40.4-201ENST00000390971 TMPRSS6Q8IU80 811 aa7.88□□□□□ -1.15
SNORA40.4-201ENST00000390971 MB21D1Q8N884 522 aa7.88□□□□□ -1.15
SNORA40.4-201ENST00000390971 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.88□□□□□ -1.15
SNORA40.4-201ENST00000390971 OR7D4Q8NG98 312 aa7.88□□□□□ -1.15
SNORA40.4-201ENST00000390971 SLC2A13Q96QE2 648 aa7.88□□□□□ -1.15
SNORA40.4-201ENST00000390971 MNTQ99583 582 aa7.88□□□□□ -1.15
SNORA40.4-201ENST00000390971 HOMER2Q9NSB8 354 aa7.88□□□□□ -1.15
SNORA40.4-201ENST00000390971 TRPS1Q9UHF7 1281 aa7.88□□□□□ -1.15
SNORA40.4-201ENST00000390971 MRFAP1Q9Y605 127 aa7.88□□□□□ -1.15
SNORA40.4-201ENST00000390971 LOC105371045A0A1W2PR82 267 aa7.87□□□□□ -1.15
SNORA40.4-201ENST00000390971 MATN3O15232 486 aa7.87□□□□□ -1.15
SNORA40.4-201ENST00000390971 MT-CO1P00395 513 aa7.87□□□□□ -1.15
SNORA40.4-201ENST00000390971 RABGGTBP53611 331 aa7.87□□□□□ -1.15
SNORA40.4-201ENST00000390971 PER3P56645 1201 aa7.87□□□□□ -1.15
SNORA40.4-201ENST00000390971 PPP3CAQ08209 521 aa7.87□□□□□ -1.15
SNORA40.4-201ENST00000390971 FOXE3Q13461 319 aa7.87□□□□□ -1.15
SNORA40.4-201ENST00000390971 NOMO1Q15155 1222 aa7.87□□□□□ -1.15
SNORA40.4-201ENST00000390971 DCAF17Q5H9S7 520 aaPredicted RBP7.87□□□□□ -1.15
SNORA40.4-201ENST00000390971 IL17DQ8TAD2 202 aa7.87□□□□□ -1.15
SNORA40.4-201ENST00000390971 MDM1Q8TC05 714 aa7.87□□□□□ -1.15
SNORA40.4-201ENST00000390971 GPATCH3Q96I76 525 aa7.87□□□□□ -1.15
SNORA40.4-201ENST00000390971 ZNF703Q9H7S9 590 aaPredicted RBP7.87□□□□□ -1.15
SNORA40.4-201ENST00000390971 SPEF1Q9Y4P9 236 aa7.87□□□□□ -1.15
SNORA40.4-201ENST00000390971 ZMYM3Q14202 1370 aa7.86□□□□□ -1.15
SNORA40.4-201ENST00000390971 GABRDO14764 452 aa7.86□□□□□ -1.15
SNORA40.4-201ENST00000390971 AMHP03971 560 aa7.86□□□□□ -1.15
SNORA40.4-201ENST00000390971 NCLP19338 710 aaKnown RBP7.86□□□□□ -1.15
SNORA40.4-201ENST00000390971 TNFRSF1AP19438 455 aa7.86□□□□□ -1.15
SNORA40.4-201ENST00000390971 KRT85P78386 507 aa7.86□□□□□ -1.15
SNORA40.4-201ENST00000390971 ACAP2Q15057 778 aa7.86□□□□□ -1.15
SNORA40.4-201ENST00000390971 ABCB5Q2M3G0 1257 aa7.86□□□□□ -1.15
SNORA40.4-201ENST00000390971 NAIF1Q69YI7 327 aaPredicted RBP7.86□□□□□ -1.15
SNORA40.4-201ENST00000390971 Q6ZVL8 140 aa7.86□□□□□ -1.15
SNORA40.4-201ENST00000390971 HTR3DQ70Z44 454 aa7.86□□□□□ -1.15
SNORA40.4-201ENST00000390971 FUBP3Q96I24 572 aaKnown RBP eCLIP7.86□□□□□ -1.15
SNORA40.4-201ENST00000390971 UHRF1Q96T88 793 aaPredicted RBP7.86□□□□□ -1.15
SNORA40.4-201ENST00000390971 KRTAP4-9Q9BYQ8 210 aa7.86□□□□□ -1.15
SNORA40.4-201ENST00000390971 DMRT3Q9NQL9 472 aa7.86□□□□□ -1.15
SNORA40.4-201ENST00000390971 PARPBPQ9NWS1 579 aa7.86□□□□□ -1.15
SNORA40.4-201ENST00000390971 DNM3Q9UQ16 869 aa7.86□□□□□ -1.15
SNORA40.4-201ENST00000390971 KLRG2A4D1S0 409 aaPredicted RBP7.85□□□□□ -1.15
SNORA40.4-201ENST00000390971 PRR5-ARHGAP8B1AHC4 643 aa7.85□□□□□ -1.15
SNORA40.4-201ENST00000390971 B5MCH6 92 aa7.85□□□□□ -1.15
SNORA40.4-201ENST00000390971 ENDOD1O94919 500 aa7.85□□□□□ -1.15
SNORA40.4-201ENST00000390971 HK1P19367 917 aa7.85□□□□□ -1.15
SNORA40.4-201ENST00000390971 PTPN7P35236 360 aa7.85□□□□□ -1.15
SNORA40.4-201ENST00000390971 ANAPC15P60006 121 aa7.85□□□□□ -1.15
SNORA40.4-201ENST00000390971 FAM47AQ5JRC9 791 aa7.85□□□□□ -1.15
SNORA40.4-201ENST00000390971 PRAMEF14Q5SWL7 426 aa7.85□□□□□ -1.15
SNORA40.4-201ENST00000390971 PPM1NQ8N819 430 aa7.85□□□□□ -1.15
SNORA40.4-201ENST00000390971 JADE3Q92613 823 aa7.85□□□□□ -1.15
SNORA40.4-201ENST00000390971 LSM14BQ9BX40 385 aaKnown RBP7.85□□□□□ -1.15
SNORA40.4-201ENST00000390971 hCG_2014768A0A024R1R8 64 aa7.84□□□□□ -1.15
SNORA40.4-201ENST00000390971 FAM171A2A8MVW0 826 aa7.84□□□□□ -1.15
SNORA40.4-201ENST00000390971 FLT3LGP49771 235 aa7.84□□□□□ -1.15
SNORA40.4-201ENST00000390971 MGAT2Q10469 447 aa7.84□□□□□ -1.15
SNORA40.4-201ENST00000390971 MIIPQ5JXC2 388 aa7.84□□□□□ -1.15
SNORA40.4-201ENST00000390971 C1QL3Q5VWW1 255 aa7.84□□□□□ -1.15
SNORA40.4-201ENST00000390971 GPRIN1Q7Z2K8 1008 aa7.84□□□□□ -1.15
SNORA40.4-201ENST00000390971 PQLC1Q8N2U9 271 aa7.84□□□□□ -1.15
SNORA40.4-201ENST00000390971 OR52N2Q8NGI0 321 aa7.84□□□□□ -1.15
SNORA40.4-201ENST00000390971 HOXB13Q92826 284 aaPredicted RBP7.84□□□□□ -1.15
SNORA40.4-201ENST00000390971 CYFIP2Q96F07 1278 aa7.84□□□□□ -1.15
SNORA40.4-201ENST00000390971 ZNF503Q96F45 646 aa7.84□□□□□ -1.15
SNORA40.4-201ENST00000390971 PLEKHG4BQ96PX9 1271 aa7.84□□□□□ -1.15
SNORA40.4-201ENST00000390971 ZNF747Q9BV97 191 aa7.84□□□□□ -1.15
SNORA40.4-201ENST00000390971 VPS11Q9H270 941 aa7.84□□□□□ -1.15
SNORA40.4-201ENST00000390971 SAP30BPQ9UHR5 308 aaKnown RBP7.84□□□□□ -1.15
SNORA40.4-201ENST00000390971 TBKBP1A7MCY6 615 aa7.83□□□□□ -1.16
SNORA40.4-201ENST00000390971 ADCY6O43306 1168 aa7.83□□□□□ -1.16
SNORA40.4-201ENST00000390971 XPOTO43592 962 aaKnown RBP7.83□□□□□ -1.16
SNORA40.4-201ENST00000390971 PCDHGA12O60330 932 aa7.83□□□□□ -1.16
SNORA40.4-201ENST00000390971 CCND1P24385 295 aa7.83□□□□□ -1.16
SNORA40.4-201ENST00000390971 SREBF1P36956 1147 aa7.83□□□□□ -1.16
SNORA40.4-201ENST00000390971 PCBP2Q15366 365 aaKnown RBP eCLIP7.83□□□□□ -1.16
SNORA40.4-201ENST00000390971 VPS72Q15906 364 aa7.83□□□□□ -1.16
SNORA40.4-201ENST00000390971 PNMA8AQ86V59 439 aaPredicted RBP7.83□□□□□ -1.16
SNORA40.4-201ENST00000390971 XYLT1Q86Y38 959 aa7.83□□□□□ -1.16
SNORA40.4-201ENST00000390971 TRMT2AQ8IZ69 625 aaKnown RBP7.83□□□□□ -1.16
SNORA40.4-201ENST00000390971 REPS2Q8NFH8 660 aa7.83□□□□□ -1.16
SNORA40.4-201ENST00000390971 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.83□□□□□ -1.16
SNORA40.4-201ENST00000390971 PGBD4Q96DM1 585 aa7.83□□□□□ -1.16
SNORA40.4-201ENST00000390971 SLC13A1Q9BZW2 595 aa7.83□□□□□ -1.16
SNORA40.4-201ENST00000390971 SPON1Q9HCB6 807 aa7.83□□□□□ -1.16
SNORA40.4-201ENST00000390971 CEP72Q9P209 647 aa7.83□□□□□ -1.16
SNORA40.4-201ENST00000390971 PCDHGA9Q9Y5G4 932 aaKnown RBP7.83□□□□□ -1.16
SNORA40.4-201ENST00000390971 PCDHGA8Q9Y5G5 932 aa7.83□□□□□ -1.16
SNORA40.4-201ENST00000390971 PCDHGA7Q9Y5G6 932 aa7.83□□□□□ -1.16
SNORA40.4-201ENST00000390971 PCDHGA6Q9Y5G7 932 aa7.83□□□□□ -1.16
SNORA40.4-201ENST00000390971 PCDHGA3Q9Y5H0 932 aa7.83□□□□□ -1.16
SNORA40.4-201ENST00000390971 TNKSO95271 1327 aa7.82□□□□□ -1.16
SNORA40.4-201ENST00000390971 NDUFS2O75306 463 aa7.82□□□□□ -1.16
SNORA40.4-201ENST00000390971 IL2RBP14784 551 aa7.82□□□□□ -1.16
SNORA40.4-201ENST00000390971 WASP42768 502 aa7.82□□□□□ -1.16
SNORA40.4-201ENST00000390971 PTH1RQ03431 593 aa7.82□□□□□ -1.16
SNORA40.4-201ENST00000390971 SP140Q13342 867 aa7.82□□□□□ -1.16
SNORA40.4-201ENST00000390971 PTPN21Q16825 1174 aa7.82□□□□□ -1.16
SNORA40.4-201ENST00000390971 BMT2Q1RMZ1 405 aa7.82□□□□□ -1.16
SNORA40.4-201ENST00000390971 MFSD14BQ5SR56 506 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms