RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 RFFLQ8WZ73 363 aa13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 TEX13BQ9BXU2 312 aa13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 DNAJC17Q9NVM6 304 aaKnown RBP13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 BTBD7Q9P203 1132 aa13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 ADAMTS5Q9UNA0 930 aa13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 FAM169AQ9Y6X4 670 aa13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 EIF3HO15372 352 aaKnown RBP eCLIP13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 HOXA7P31268 230 aaPredicted RBP13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 HSD17B3P37058 310 aa13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 SNX1Q13596 522 aa13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 PHLDB3Q6NSJ2 640 aa13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 OTUD6BQ8N6M0 293 aa13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 SIX2Q9NPC8 291 aa13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 GDF3Q9NR23 364 aa13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 ZC3H4Q9UPT8 1303 aaKnown RBP13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 NEBLO76041 1014 aa13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 MKRN3Q13064 507 aaKnown RBP13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 JPH2Q9BR39 696 aaPredicted RBP13.01□□□□□ -0.33
CAPRIN1-202ENST00000389645 IREB2P48200 963 aaKnown RBP13□□□□□ -0.33
CAPRIN1-202ENST00000389645 DR1Q01658 176 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 BIRC3Q13489 604 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 UGCGQ16739 394 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 ARHGEF19Q8IW93 802 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 XXYLT1Q8NBI6 393 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 POMGNT1Q8WZA1 660 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 ACCSQ96QU6 501 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 NEUROG2Q9H2A3 272 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 CYP39A1Q9NYL5 469 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 DAAM1Q9Y4D1 1078 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 RLFQ13129 1914 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 CCNE2O96020 404 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 P4HBP07237 508 aaKnown RBP13□□□□□ -0.33
CAPRIN1-202ENST00000389645 QARSP47897 775 aaKnown RBP13□□□□□ -0.33
CAPRIN1-202ENST00000389645 KCNJ1P48048 391 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 PPP3CAQ08209 521 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 MAP1SQ66K74 1059 aaPredicted RBP13□□□□□ -0.33
CAPRIN1-202ENST00000389645 B3GNT9Q6UX72 402 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 NT5DC3Q86UY8 548 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 CBWD2Q8IUF1 395 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 MSL3Q8N5Y2 521 aaKnown RBP13□□□□□ -0.33
CAPRIN1-202ENST00000389645 RIT2Q99578 217 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 HSPBP1Q9NZL4 362 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 ALG6Q9Y672 507 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 PHIPQ8WWQ0 1821 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 HNRNPDLO14979 420 aaKnown RBP13□□□□□ -0.33
CAPRIN1-202ENST00000389645 YWHABP31946 246 aaKnown RBP13□□□□□ -0.33
CAPRIN1-202ENST00000389645 SMTNP53814 917 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 PPP1R7Q15435 360 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 TRIP13Q15645 432 aaPredicted RBP13□□□□□ -0.33
CAPRIN1-202ENST00000389645 SEL1L2Q5TEA6 688 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 VSIG10LQ86VR7 867 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 UBL4BQ8N7F7 174 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 CAVIN3Q969G5 261 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 ZNF653Q96CK0 615 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 ATP6V1G3Q96LB4 118 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 FMO2Q99518 471 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 AGPAT1Q99943 283 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 PI4K2AQ9BTU6 479 aa13□□□□□ -0.33
CAPRIN1-202ENST00000389645 TOPORSQ9NS56 1045 aaPredicted RBP13□□□□□ -0.33
CAPRIN1-202ENST00000389645 EIF3DO15371 548 aaKnown RBP eCLIP12.99□□□□□ -0.331e-5■□□□□ 8.6
CAPRIN1-202ENST00000389645 RGS20O76081 388 aa12.99□□□□□ -0.33
CAPRIN1-202ENST00000389645 MARCKSL1P49006 195 aa12.99□□□□□ -0.33
CAPRIN1-202ENST00000389645 IFT88Q13099 833 aa12.99□□□□□ -0.33
CAPRIN1-202ENST00000389645 ANKRD35Q8N283 1001 aa12.99□□□□□ -0.33
CAPRIN1-202ENST00000389645 CEP170P1Q96L14 293 aa12.99□□□□□ -0.33
CAPRIN1-202ENST00000389645 ISCUQ9H1K1 167 aa12.99□□□□□ -0.33
CAPRIN1-202ENST00000389645 ACAD9Q9H845 621 aa12.99□□□□□ -0.33
CAPRIN1-202ENST00000389645 SGPL1O95470 568 aa12.99□□□□□ -0.33
CAPRIN1-202ENST00000389645 MAGOHP61326 146 aaKnown RBP12.99□□□□□ -0.33
CAPRIN1-202ENST00000389645 NAIF1Q69YI7 327 aaPredicted RBP12.99□□□□□ -0.33
CAPRIN1-202ENST00000389645 INTS8Q75QN2 995 aaKnown RBP12.99□□□□□ -0.33
CAPRIN1-202ENST00000389645 NCAPG2Q86XI2 1143 aa12.99□□□□□ -0.33
CAPRIN1-202ENST00000389645 CCDC50Q8IVM0 306 aa12.99□□□□□ -0.33
CAPRIN1-202ENST00000389645 PPM1EQ8WY54 764 aa12.99□□□□□ -0.33
CAPRIN1-202ENST00000389645 USTQ9Y2C2 406 aa12.99□□□□□ -0.33
CAPRIN1-202ENST00000389645 GLTPD2A6NH11 291 aa12.98□□□□□ -0.33
CAPRIN1-202ENST00000389645 HGSO14964 777 aaPredicted RBP12.98□□□□□ -0.33
CAPRIN1-202ENST00000389645 FDX1P10109 184 aa12.98□□□□□ -0.33
CAPRIN1-202ENST00000389645 GHRHRQ02643 423 aa12.98□□□□□ -0.33
CAPRIN1-202ENST00000389645 SH3D19Q5HYK7 790 aa12.98□□□□□ -0.33
CAPRIN1-202ENST00000389645 CPLX4Q7Z7G2 160 aa12.98□□□□□ -0.33
CAPRIN1-202ENST00000389645 NLRX1Q86UT6 975 aa12.98□□□□□ -0.33
CAPRIN1-202ENST00000389645 LRRC57Q8N9N7 239 aa12.98□□□□□ -0.33
CAPRIN1-202ENST00000389645 DHX38Q92620 1227 aaKnown RBP12.98□□□□□ -0.33
CAPRIN1-202ENST00000389645 KRT35Q92764 455 aa12.98□□□□□ -0.33
CAPRIN1-202ENST00000389645 SEL1LQ9UBV2 794 aa12.98□□□□□ -0.33
CAPRIN1-202ENST00000389645 DENND3A2RUS2 1198 aa12.98□□□□□ -0.33
CAPRIN1-202ENST00000389645 CCDC188H7C350 402 aa12.98□□□□□ -0.33
CAPRIN1-202ENST00000389645 TNNI1P19237 187 aa12.98□□□□□ -0.33
CAPRIN1-202ENST00000389645 LSP1P33241 339 aa12.98□□□□□ -0.33
CAPRIN1-202ENST00000389645 PRKCIP41743 596 aa12.98□□□□□ -0.33
CAPRIN1-202ENST00000389645 CUL1Q13616 776 aa12.98□□□□□ -0.33
CAPRIN1-202ENST00000389645 CYFIP1Q7L576 1253 aa12.98□□□□□ -0.33
CAPRIN1-202ENST00000389645 EEPD1Q7L9B9 569 aa12.98□□□□□ -0.33
CAPRIN1-202ENST00000389645 ANKRD13AQ8IZ07 590 aa12.98□□□□□ -0.33
CAPRIN1-202ENST00000389645 IQCKQ8N0W5 287 aa12.98□□□□□ -0.33
CAPRIN1-202ENST00000389645 NSUN6Q8TEA1 469 aaKnown RBP12.98□□□□□ -0.33
CAPRIN1-202ENST00000389645 CAPN7Q9Y6W3 813 aa12.98□□□□□ -0.33
CAPRIN1-202ENST00000389645 NF2P35240 595 aa12.98□□□□□ -0.33
CAPRIN1-202ENST00000389645 CDR1P51861 262 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms