RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 SPARCL1Q14515 664 aa14.49□□□□□ -0.09
C9orf47-203ENST00000375851 SNCBQ16143 134 aa14.49□□□□□ -0.09
C9orf47-203ENST00000375851 TRIM68Q6AZZ1 485 aa14.49□□□□□ -0.09
C9orf47-203ENST00000375851 SYT2Q8N9I0 419 aaPredicted RBP14.49□□□□□ -0.09
C9orf47-203ENST00000375851 SLC35G2Q8TBE7 412 aa14.49□□□□□ -0.09
C9orf47-203ENST00000375851 PITPNM3Q9BZ71 974 aa14.49□□□□□ -0.09
C9orf47-203ENST00000375851 SMARCAD1Q9H4L7 1026 aa14.49□□□□□ -0.09
C9orf47-203ENST00000375851 CASQ2O14958 399 aaPredicted RBP14.49□□□□□ -0.09
C9orf47-203ENST00000375851 EIF3DO15371 548 aaKnown RBP eCLIP14.49□□□□□ -0.09
C9orf47-203ENST00000375851 CYP11B2P19099 503 aa14.49□□□□□ -0.09
C9orf47-203ENST00000375851 RPS12P25398 132 aaKnown RBP14.49□□□□□ -0.09
C9orf47-203ENST00000375851 ADORA2BP29275 332 aa14.49□□□□□ -0.09
C9orf47-203ENST00000375851 EMC2Q15006 297 aa14.49□□□□□ -0.09
C9orf47-203ENST00000375851 JADE1Q6IE81 842 aa14.49□□□□□ -0.09
C9orf47-203ENST00000375851 TAAR1Q96RJ0 339 aa14.49□□□□□ -0.09
C9orf47-203ENST00000375851 CYP26B1Q9NR63 512 aa14.49□□□□□ -0.09
C9orf47-203ENST00000375851 TARSL2A2RTX5 802 aaKnown RBP14.48□□□□□ -0.09
C9orf47-203ENST00000375851 EPHB1P54762 984 aa14.48□□□□□ -0.09
C9orf47-203ENST00000375851 TSPY1Q01534 308 aa14.48□□□□□ -0.09
C9orf47-203ENST00000375851 NCOA4Q13772 614 aa14.48□□□□□ -0.09
C9orf47-203ENST00000375851 MS4A14Q96JA4 679 aa14.48□□□□□ -0.09
C9orf47-203ENST00000375851 DONSONQ9NYP3 566 aa14.48□□□□□ -0.09
C9orf47-203ENST00000375851 KRT14P02533 472 aa14.48□□□□□ -0.09
C9orf47-203ENST00000375851 SERPINB6P35237 376 aa14.48□□□□□ -0.09
C9orf47-203ENST00000375851 CAP2P40123 477 aa14.48□□□□□ -0.09
C9orf47-203ENST00000375851 NAB2Q15742 525 aa14.48□□□□□ -0.09
C9orf47-203ENST00000375851 TTC17Q96AE7 1141 aa14.48□□□□□ -0.09
C9orf47-203ENST00000375851 MID2Q9UJV3 735 aa14.48□□□□□ -0.09
C9orf47-203ENST00000375851 AGAP1Q9UPQ3 857 aa14.48□□□□□ -0.09
C9orf47-203ENST00000375851 POLRMTO00411 1230 aaKnown RBP14.48□□□□□ -0.09
C9orf47-203ENST00000375851 CREB3O43889 395 aa14.48□□□□□ -0.09
C9orf47-203ENST00000375851 KRT38O76015 456 aa14.48□□□□□ -0.09
C9orf47-203ENST00000375851 CD44P16070 742 aaKnown RBP14.48□□□□□ -0.09
C9orf47-203ENST00000375851 TSTA3Q13630 321 aaPredicted RBP14.48□□□□□ -0.09
C9orf47-203ENST00000375851 HIBCHQ6NVY1 386 aaPredicted RBP14.48□□□□□ -0.09
C9orf47-203ENST00000375851 TTC25Q96NG3 672 aa14.48□□□□□ -0.09
C9orf47-203ENST00000375851 WDR70Q9NW82 654 aa14.48□□□□□ -0.09
C9orf47-203ENST00000375851 UVRAGQ9P2Y5 699 aa14.48□□□□□ -0.09
C9orf47-203ENST00000375851 FBXL5Q9UKA1 691 aa14.48□□□□□ -0.09
C9orf47-203ENST00000375851 ANGPTL3Q9Y5C1 460 aa14.48□□□□□ -0.09
C9orf47-203ENST00000375851 COPEO14579 308 aa14.48□□□□□ -0.09
C9orf47-203ENST00000375851 KRT3P12035 628 aa14.48□□□□□ -0.09
C9orf47-203ENST00000375851 CDH6P55285 790 aa14.48□□□□□ -0.09
C9orf47-203ENST00000375851 STX1BP61266 288 aa14.48□□□□□ -0.09
C9orf47-203ENST00000375851 DHX34Q14147 1143 aaKnown RBP14.48□□□□□ -0.09
C9orf47-203ENST00000375851 HP1BP3Q5SSJ5 553 aaPredicted RBP14.48□□□□□ -0.09
C9orf47-203ENST00000375851 XRRA1Q6P2D8 792 aa14.48□□□□□ -0.09
C9orf47-203ENST00000375851 PDCD7Q8N8D1 485 aaKnown RBP14.48□□□□□ -0.09
C9orf47-203ENST00000375851 VPS39Q96JC1 886 aa14.48□□□□□ -0.09
C9orf47-203ENST00000375851 DHX35Q9H5Z1 703 aaKnown RBP14.48□□□□□ -0.09
C9orf47-203ENST00000375851 DDX56Q9NY93 547 aaKnown RBP14.48□□□□□ -0.09
C9orf47-203ENST00000375851 RIMS1Q86UR5 1692 aaKnown RBP14.47□□□□□ -0.09
C9orf47-203ENST00000375851 S100BP04271 92 aaPredicted RBP14.47□□□□□ -0.09
C9orf47-203ENST00000375851 EZH2Q15910 746 aaKnown RBP14.47□□□□□ -0.09
C9orf47-203ENST00000375851 C18orf8Q96DM3 657 aa14.47□□□□□ -0.09
C9orf47-203ENST00000375851 FIS1Q9Y3D6 152 aa14.47□□□□□ -0.09
C9orf47-203ENST00000375851 BCL9O00512 1426 aa14.47□□□□□ -0.09
C9orf47-203ENST00000375851 A0A1W2PQJ5 194 aa14.47□□□□□ -0.09
C9orf47-203ENST00000375851 HNRNPH2P55795 449 aaKnown RBP14.47□□□□□ -0.09
C9orf47-203ENST00000375851 PKN1Q16512 942 aa14.47□□□□□ -0.09
C9orf47-203ENST00000375851 KYAT1Q16773 422 aa14.47□□□□□ -0.09
C9orf47-203ENST00000375851 FAM47EQ6ZV65 393 aa14.47□□□□□ -0.09
C9orf47-203ENST00000375851 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.47□□□□□ -0.09
C9orf47-203ENST00000375851 ANKEF1Q9NU02 776 aa14.47□□□□□ -0.09
C9orf47-203ENST00000375851 BAZ2BQ9UIF8 2168 aaKnown RBP14.47□□□□□ -0.09
C9orf47-203ENST00000375851 NWD1Q149M9 1564 aa14.47□□□□□ -0.09
C9orf47-203ENST00000375851 GOLGA8QA0A0J9YX86 632 aa14.47□□□□□ -0.09
C9orf47-203ENST00000375851 GOLGA8OA6NCC3 632 aa14.47□□□□□ -0.09
C9orf47-203ENST00000375851 GOLGA8NF8WBI6 632 aa14.47□□□□□ -0.09
C9orf47-203ENST00000375851 TNPO2O14787 897 aaKnown RBP14.47□□□□□ -0.09
C9orf47-203ENST00000375851 DYNC1LI2O43237 492 aaPredicted RBP14.47□□□□□ -0.09
C9orf47-203ENST00000375851 PMLP29590 882 aa14.47□□□□□ -0.09
C9orf47-203ENST00000375851 TAP1Q03518 808 aa14.47□□□□□ -0.09
C9orf47-203ENST00000375851 RBM43Q6ZSC3 357 aaKnown RBP14.47□□□□□ -0.09
C9orf47-203ENST00000375851 FBXL16Q8N461 479 aa14.47□□□□□ -0.09
C9orf47-203ENST00000375851 OR6J1Q8NGC5 347 aa14.47□□□□□ -0.09
C9orf47-203ENST00000375851 CPA5Q8WXQ8 436 aa14.47□□□□□ -0.09
C9orf47-203ENST00000375851 TTC1Q99614 292 aa14.47□□□□□ -0.09
C9orf47-203ENST00000375851 KBTBD4Q9NVX7 518 aa14.47□□□□□ -0.09
C9orf47-203ENST00000375851 HACL1Q9UJ83 578 aa14.47□□□□□ -0.09
C9orf47-203ENST00000375851 G3BP2Q9UN86 482 aaKnown RBP14.47□□□□□ -0.09
C9orf47-203ENST00000375851 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.47□□□□□ -0.09
C9orf47-203ENST00000375851 TNS2Q63HR2 1409 aa14.47□□□□□ -0.09
C9orf47-203ENST00000375851 DDTLA6NHG4 134 aaPredicted RBP14.47□□□□□ -0.09
C9orf47-203ENST00000375851 NR1H3Q13133 447 aa14.47□□□□□ -0.09
C9orf47-203ENST00000375851 HEATR6Q6AI08 1181 aaKnown RBP14.47□□□□□ -0.09
C9orf47-203ENST00000375851 ARHGEF28Q8N1W1 1705 aaKnown RBP14.47□□□□□ -0.09
C9orf47-203ENST00000375851 ZNF560Q96MR9 790 aa14.47□□□□□ -0.09
C9orf47-203ENST00000375851 ICAM1P05362 532 aa14.46□□□□□ -0.09
C9orf47-203ENST00000375851 SLC1A1P43005 524 aa14.46□□□□□ -0.09
C9orf47-203ENST00000375851 KLHDC7AQ5VTJ3 777 aa14.46□□□□□ -0.09
C9orf47-203ENST00000375851 IZUMO3Q5VZ72 239 aa14.46□□□□□ -0.09
C9orf47-203ENST00000375851 ATG16L1Q676U5 607 aa14.46□□□□□ -0.09
C9orf47-203ENST00000375851 THOC1Q96FV9 657 aaKnown RBP14.46□□□□□ -0.09
C9orf47-203ENST00000375851 TXLNGQ9NUQ3 528 aa14.46□□□□□ -0.09
C9orf47-203ENST00000375851 FAM205AQ6ZU69 1335 aa14.46□□□□□ -0.09
C9orf47-203ENST00000375851 MED24O75448 989 aa14.46□□□□□ -0.09
C9orf47-203ENST00000375851 BRAFP15056 766 aa14.46□□□□□ -0.09
C9orf47-203ENST00000375851 ZNF449Q6P9G9 518 aa14.46□□□□□ -0.09
C9orf47-203ENST00000375851 PPM1NQ8N819 430 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms