RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 CHADLQ6NUI6 762 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 FAM47EQ6ZV65 393 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 CDAN1Q8IWY9 1227 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 MREGQ8N565 214 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 KIFAP3Q92845 792 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 SCYL1Q96KG9 808 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 SYT15Q9BQS2 421 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 ABCG4Q9H172 646 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 CCDC68Q9H2F9 335 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 TDRD3Q9H7E2 651 aaKnown RBP11.61□□□□□ -0.55
SND1-201ENST00000354725 PCDHA13Q9Y5I0 950 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 USP11P51784 963 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 TFAP4Q01664 338 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 MAATS1Q7Z4T9 603 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 PEX5LQ8IYB4 626 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 GUF1Q8N442 669 aaKnown RBP11.61□□□□□ -0.55
SND1-201ENST00000354725 SPATA4Q8NEY3 305 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 NAF1Q96HR8 494 aaKnown RBP11.61□□□□□ -0.55
SND1-201ENST00000354725 ZNF304Q9HCX3 659 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 JADE2Q9NQC1 790 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 GGA3Q9NZ52 723 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 LRWD1Q9UFC0 647 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 ATP1A2P50993 1020 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 SEC24CP53992 1094 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 DLGAP5Q15398 846 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 ANKRD20A2Q5SQ80 823 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 ANKRD20A1Q5TYW2 823 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 ANKRD20A3Q5VUR7 823 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 KRT25Q7Z3Z0 450 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 FGD4Q96M96 766 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 NR1H4Q96RI1 486 aaPredicted RBP11.61□□□□□ -0.55
SND1-201ENST00000354725 TMEM47Q9BQJ4 181 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 TLR10Q9BXR5 811 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 GDF3Q9NR23 364 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 TUBA8Q9NY65 449 aaPredicted RBP11.61□□□□□ -0.55
SND1-201ENST00000354725 STK17AQ9UEE5 414 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 PPP2R3BQ9Y5P8 575 aa11.61□□□□□ -0.55
SND1-201ENST00000354725 PPP1R37O75864 691 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 UBA7P41226 1012 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 USP46P62068 366 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 GLE1Q53GS7 698 aaKnown RBP11.6□□□□□ -0.55
SND1-201ENST00000354725 HYIQ5T013 277 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 ALS2CLQ60I27 953 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 UNC13DQ70J99 1090 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 SLC7A5P1Q8MH63 180 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 SENP7Q9BQF6 1050 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.6□□□□□ -0.55
SND1-201ENST00000354725 SH3GLB1Q9Y371 365 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 TRIM43BA6NCK2 446 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 NOL4O94818 638 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 IL33O95760 270 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 PCNAP12004 261 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 LRRC63Q05C16 580 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 C2orf54Q08AI8 447 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 TAF11Q15544 211 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 IQCEQ6IPM2 695 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 EMBQ6PCB8 327 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 CCDC174Q6PII3 467 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 CD302Q8IX05 232 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 RNF10Q8N5U6 811 aaKnown RBP11.6□□□□□ -0.55
SND1-201ENST00000354725 ANKK1Q8NFD2 765 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 CYFIP2Q96F07 1278 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 RIOX1Q9H6W3 641 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 KCTD5Q9NXV2 234 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 TMEM59LQ9UK28 342 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 ITGB1BP2Q9UKP3 347 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 EFR3BQ9Y2G0 817 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 PCDHA2Q9Y5H9 948 aa11.6□□□□□ -0.55
SND1-201ENST00000354725 BTNL10A8MVZ5 291 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 IDEP14735 1019 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 MLH1P40692 756 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 CYP27A1Q02318 531 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 KCNMA1Q12791 1236 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 MRPL28Q13084 256 aaKnown RBP11.59□□□□□ -0.55
SND1-201ENST00000354725 MAN2A1Q16706 1144 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 PLEKHG6Q3KR16 790 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 KLHDC7AQ5VTJ3 777 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 CEP128Q6ZU80 1094 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 C16orf86Q6ZW13 317 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 PPP2R3CQ969Q6 453 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 LRRC1Q9BTT6 524 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 NDST4Q9H3R1 872 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 CIDEBQ9UHD4 219 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 NENFQ9UMX5 172 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 SSX2IPQ9Y2D8 614 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.59□□□□□ -0.55
SND1-201ENST00000354725 MYMKA6NI61 221 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 ADM5C9JUS6 153 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 MSL3P1P0C860 447 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 SNHG28P0DPA3 235 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 TCP1P17987 556 aaKnown RBP11.59□□□□□ -0.55
SND1-201ENST00000354725 CLK2P49760 499 aaKnown RBP11.59□□□□□ -0.55
SND1-201ENST00000354725 NEK2P51955 445 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 CCNG1P51959 295 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 GUCY1A3Q02108 690 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 PDE4DQ08499 809 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 NFX1Q12986 1120 aaKnown RBP11.59□□□□□ -0.55
SND1-201ENST00000354725 TTMPQ5BVD1 217 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 RNF220Q5VTB9 566 aa11.59□□□□□ -0.55
SND1-201ENST00000354725 CAPN12Q6ZSI9 719 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms