RNA–Protein interactions for RNA: ENST00000343788.10

SUGT1-202, Transcript of SGT1 homolog, MIS12 kinetochore complex assembly cochaperone, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SUGT1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGT1-202ENST00000343788 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.8□□□□□ -0.36
SUGT1-202ENST00000343788 MIOSQ9NXC5 875 aa12.8□□□□□ -0.36
SUGT1-202ENST00000343788 SUCLA2Q9P2R7 463 aaPredicted RBP12.8□□□□□ -0.36
SUGT1-202ENST00000343788 ZMIZ1Q9ULJ6 1067 aa12.8□□□□□ -0.36
SUGT1-202ENST00000343788 FLNBO75369 2602 aaKnown RBP12.8□□□□□ -0.36
SUGT1-202ENST00000343788 NOTCH4Q99466 2003 aa12.79□□□□□ -0.36
SUGT1-202ENST00000343788 LAMA5O15230 3695 aa12.79□□□□□ -0.36
SUGT1-202ENST00000343788 ITPR1Q14643 2758 aa12.79□□□□□ -0.36
SUGT1-202ENST00000343788 C1QTNF9BB2RNN3 333 aa12.79□□□□□ -0.36
SUGT1-202ENST00000343788 STBD1O95210 358 aa12.79□□□□□ -0.36
SUGT1-202ENST00000343788 C1QTNF9P0C862 333 aa12.79□□□□□ -0.36
SUGT1-202ENST00000343788 HOXA11P31270 313 aaPredicted RBP12.79□□□□□ -0.36
SUGT1-202ENST00000343788 SRSF5Q13243 272 aaKnown RBP12.79□□□□□ -0.36
SUGT1-202ENST00000343788 SIM2Q14190 667 aaPredicted RBP12.79□□□□□ -0.36
SUGT1-202ENST00000343788 MTERF2Q49AM1 385 aa12.79□□□□□ -0.36
SUGT1-202ENST00000343788 IL31Q6EBC2 164 aa12.79□□□□□ -0.36
SUGT1-202ENST00000343788 POTEHQ6S545 545 aa12.79□□□□□ -0.36
SUGT1-202ENST00000343788 SMC5Q8IY18 1101 aa12.79□□□□□ -0.36
SUGT1-202ENST00000343788 SMG8Q8ND04 991 aaKnown RBP12.79□□□□□ -0.36
SUGT1-202ENST00000343788 NLRP4Q96MN2 994 aa12.79□□□□□ -0.36
SUGT1-202ENST00000343788 MTA3Q9BTC8 594 aa12.79□□□□□ -0.36
SUGT1-202ENST00000343788 NIFKQ9BYG3 293 aaKnown RBP12.79□□□□□ -0.36
SUGT1-202ENST00000343788 FBXW11Q9UKB1 542 aa12.79□□□□□ -0.36
SUGT1-202ENST00000343788 NDRG2Q9UN36 371 aaKnown RBP12.79□□□□□ -0.36
SUGT1-202ENST00000343788 MRPS17Q9Y2R5 130 aaKnown RBP12.79□□□□□ -0.36
SUGT1-202ENST00000343788 CNTNAP5Q8WYK1 1306 aa12.79□□□□□ -0.36
SUGT1-202ENST00000343788 ARL5CA6NH57 179 aa12.78□□□□□ -0.36
SUGT1-202ENST00000343788 CCL16O15467 120 aa12.78□□□□□ -0.36
SUGT1-202ENST00000343788 NCLP19338 710 aaKnown RBP12.78□□□□□ -0.36
SUGT1-202ENST00000343788 LIFRP42702 1097 aa12.78□□□□□ -0.36
SUGT1-202ENST00000343788 DNM2P50570 870 aa12.78□□□□□ -0.36
SUGT1-202ENST00000343788 SETQ01105 290 aaPredicted RBP12.78□□□□□ -0.36
SUGT1-202ENST00000343788 FUT2Q10981 343 aa12.78□□□□□ -0.36
SUGT1-202ENST00000343788 USP41Q3LFD5 358 aa12.78□□□□□ -0.36
SUGT1-202ENST00000343788 PRR16Q569H4 304 aa12.78□□□□□ -0.36
SUGT1-202ENST00000343788 FUT10Q6P4F1 479 aa12.78□□□□□ -0.36
SUGT1-202ENST00000343788 PRSS55Q6UWB4 352 aaPredicted RBP12.78□□□□□ -0.36
SUGT1-202ENST00000343788 NPAS3Q8IXF0 933 aa12.78□□□□□ -0.36
SUGT1-202ENST00000343788 GPR65Q8IYL9 337 aa12.78□□□□□ -0.36
SUGT1-202ENST00000343788 LENG9Q96B70 501 aa12.78□□□□□ -0.36
SUGT1-202ENST00000343788 GAD1Q99259 594 aa12.78□□□□□ -0.36
SUGT1-202ENST00000343788 MINDY3Q9H8M7 445 aa12.78□□□□□ -0.36
SUGT1-202ENST00000343788 RXFP3Q9NSD7 469 aa12.78□□□□□ -0.36
SUGT1-202ENST00000343788 HCFC1R1Q9NWW0 138 aa12.78□□□□□ -0.36
SUGT1-202ENST00000343788 BARHL2Q9NY43 387 aa12.78□□□□□ -0.36
SUGT1-202ENST00000343788 POLIQ9UNA4 740 aa12.78□□□□□ -0.36
SUGT1-202ENST00000343788 SLC12A7Q9Y666 1083 aa12.78□□□□□ -0.36
SUGT1-202ENST00000343788 V9GY48 417 aaPredicted RBP12.78□□□□□ -0.36
SUGT1-202ENST00000343788 CHMP2AO43633 222 aa12.77□□□□□ -0.37
SUGT1-202ENST00000343788 MAFO75444 373 aaPredicted RBP12.77□□□□□ -0.37
SUGT1-202ENST00000343788 HNRNPA1P09651 372 aaKnown RBP eCLIP12.77□□□□□ -0.37
SUGT1-202ENST00000343788 MCM5P33992 734 aa12.77□□□□□ -0.37
SUGT1-202ENST00000343788 SCNN1GP51170 649 aa12.77□□□□□ -0.37
SUGT1-202ENST00000343788 LIMK1P53667 647 aa12.77□□□□□ -0.37
SUGT1-202ENST00000343788 SATB1Q01826 763 aa12.77□□□□□ -0.37
SUGT1-202ENST00000343788 NUCB1Q02818 461 aa12.77□□□□□ -0.37
SUGT1-202ENST00000343788 RTP2Q5QGT7 225 aa12.77□□□□□ -0.37
SUGT1-202ENST00000343788 PPM1LQ5SGD2 360 aa12.77□□□□□ -0.37
SUGT1-202ENST00000343788 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.77□□□□□ -0.37
SUGT1-202ENST00000343788 MICU3Q86XE3 530 aa12.77□□□□□ -0.37
SUGT1-202ENST00000343788 ING5Q8WYH8 240 aa12.77□□□□□ -0.37
SUGT1-202ENST00000343788 RABGGTAQ92696 567 aa12.77□□□□□ -0.37
SUGT1-202ENST00000343788 TMEM87BQ96K49 555 aa12.77□□□□□ -0.37
SUGT1-202ENST00000343788 ZFP42Q96MM3 310 aa12.77□□□□□ -0.37
SUGT1-202ENST00000343788 CLSTN3Q9BQT9 956 aa12.77□□□□□ -0.37
SUGT1-202ENST00000343788 COLEC11Q9BWP8 271 aa12.77□□□□□ -0.37
SUGT1-202ENST00000343788 LRRC2Q9BYS8 371 aa12.77□□□□□ -0.37
SUGT1-202ENST00000343788 SEPT9Q9UHD8 586 aaPredicted RBP12.77□□□□□ -0.37
SUGT1-202ENST00000343788 CHURC1-FNTBB4DL54 471 aa12.76□□□□□ -0.37
SUGT1-202ENST00000343788 FOXD2O60548 495 aaPredicted RBP12.76□□□□□ -0.37
SUGT1-202ENST00000343788 ECI2O75521 394 aa12.76□□□□□ -0.37
SUGT1-202ENST00000343788 C8AP07357 584 aa12.76□□□□□ -0.37
SUGT1-202ENST00000343788 ITGA4P13612 1032 aa12.76□□□□□ -0.37
SUGT1-202ENST00000343788 MLH1P40692 756 aa12.76□□□□□ -0.37
SUGT1-202ENST00000343788 FNTBP49356 437 aa12.76□□□□□ -0.37
SUGT1-202ENST00000343788 CCR3P51677 355 aa12.76□□□□□ -0.37
SUGT1-202ENST00000343788 GAS6Q14393 721 aa12.76□□□□□ -0.37
SUGT1-202ENST00000343788 PPP2R5DQ14738 602 aa12.76□□□□□ -0.37
SUGT1-202ENST00000343788 SF3A2Q15428 464 aaKnown RBP12.76□□□□□ -0.37
SUGT1-202ENST00000343788 TANGO2Q6ICL3 276 aa12.76□□□□□ -0.37
SUGT1-202ENST00000343788 UNQ6494/PRO21346Q6UXR6 183 aa12.76□□□□□ -0.37
SUGT1-202ENST00000343788 KDF1Q8NAX2 398 aaPredicted RBP12.76□□□□□ -0.37
SUGT1-202ENST00000343788 GJA10Q969M2 543 aa12.76□□□□□ -0.37
SUGT1-202ENST00000343788 EIF2AQ9BY44 585 aaKnown RBP12.76□□□□□ -0.37
SUGT1-202ENST00000343788 GLT8D2Q9H1C3 349 aa12.76□□□□□ -0.37
SUGT1-202ENST00000343788 UNC45AQ9H3U1 944 aa12.76□□□□□ -0.37
SUGT1-202ENST00000343788 LMAN1LQ9HAT1 526 aa12.76□□□□□ -0.37
SUGT1-202ENST00000343788 UBN1Q9NPG3 1134 aa12.76□□□□□ -0.37
SUGT1-202ENST00000343788 DNMT3BQ9UBC3 853 aaKnown RBP12.76□□□□□ -0.37
SUGT1-202ENST00000343788 HES2Q9Y543 173 aa12.76□□□□□ -0.37
SUGT1-202ENST00000343788 IPPQ9Y573 584 aa12.76□□□□□ -0.37
SUGT1-202ENST00000343788 MSH4O15457 936 aa12.75□□□□□ -0.37
SUGT1-202ENST00000343788 ADAM12O43184 909 aa12.75□□□□□ -0.37
SUGT1-202ENST00000343788 EDIL3O43854 480 aa12.75□□□□□ -0.37
SUGT1-202ENST00000343788 KCNK5O95279 499 aa12.75□□□□□ -0.37
SUGT1-202ENST00000343788 HOXA9P31269 272 aa12.75□□□□□ -0.37
SUGT1-202ENST00000343788 CIITAP33076 1130 aa12.75□□□□□ -0.37
SUGT1-202ENST00000343788 CREMQ03060 361 aa12.75□□□□□ -0.37
SUGT1-202ENST00000343788 AASDHQ4L235 1098 aaPredicted RBP12.75□□□□□ -0.37
SUGT1-202ENST00000343788 XKR3Q5GH77 459 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms