RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 NLRP14Q86W24 1093 aa20.57■□□□□ 0.88
CDK13-202ENST00000340829 ZBED8Q8IZ13 594 aa20.57■□□□□ 0.88
CDK13-202ENST00000340829 ACER1Q8TDN7 264 aa20.57■□□□□ 0.88
CDK13-202ENST00000340829 RNF139Q8WU17 664 aa20.57■□□□□ 0.88
CDK13-202ENST00000340829 RIT2Q99578 217 aa20.57■□□□□ 0.88
CDK13-202ENST00000340829 FNDC3AQ9Y2H6 1198 aaKnown RBP20.57■□□□□ 0.88
CDK13-202ENST00000340829 A0A0G2JND7 137 aa20.57■□□□□ 0.88
CDK13-202ENST00000340829 PFDN6O15212 129 aa20.57■□□□□ 0.88
CDK13-202ENST00000340829 HUS1O60921 280 aa20.57■□□□□ 0.88
CDK13-202ENST00000340829 ANXA13P27216 316 aa20.57■□□□□ 0.88
CDK13-202ENST00000340829 SPOPLQ6IQ16 392 aa20.57■□□□□ 0.88
CDK13-202ENST00000340829 BBS5Q8N3I7 341 aa20.57■□□□□ 0.88
CDK13-202ENST00000340829 PLAGL2Q9UPG8 496 aa20.57■□□□□ 0.88
CDK13-202ENST00000340829 DCCP43146 1447 aa20.56■□□□□ 0.88
CDK13-202ENST00000340829 COPEO14579 308 aa20.56■□□□□ 0.88
CDK13-202ENST00000340829 EIF3DO15371 548 aaKnown RBP eCLIP20.56■□□□□ 0.88
CDK13-202ENST00000340829 PRKCBP05771 671 aa20.56■□□□□ 0.88
CDK13-202ENST00000340829 PDIA2Q13087 525 aaKnown RBP20.56■□□□□ 0.88
CDK13-202ENST00000340829 BZW1Q7L1Q6 419 aaKnown RBP20.56■□□□□ 0.88
CDK13-202ENST00000340829 BEST2Q8NFU1 509 aa20.56■□□□□ 0.88
CDK13-202ENST00000340829 EHD2Q9NZN4 543 aa20.56■□□□□ 0.88
CDK13-202ENST00000340829 F5H423 210 aaPredicted RBP20.56■□□□□ 0.88
CDK13-202ENST00000340829 WDR72Q3MJ13 1102 aa20.56■□□□□ 0.88
CDK13-202ENST00000340829 KIAA1755Q5JYT7 1200 aa20.56■□□□□ 0.88
CDK13-202ENST00000340829 TADA2BQ86TJ2 420 aa20.56■□□□□ 0.88
CDK13-202ENST00000340829 CASQ2O14958 399 aaPredicted RBP20.56■□□□□ 0.88
CDK13-202ENST00000340829 GBP5Q96PP8 586 aa20.56■□□□□ 0.88
CDK13-202ENST00000340829 L2HGDHQ9H9P8 463 aa20.56■□□□□ 0.88
CDK13-202ENST00000340829 DUSP10Q9Y6W6 482 aa20.56■□□□□ 0.88
CDK13-202ENST00000340829 MAPK13O15264 365 aa20.56■□□□□ 0.88
CDK13-202ENST00000340829 EFNA5P52803 228 aa20.56■□□□□ 0.88
CDK13-202ENST00000340829 MKRN4PQ13434 485 aaPredicted RBP20.56■□□□□ 0.88
CDK13-202ENST00000340829 SALL1Q9NSC2 1324 aa20.55■□□□□ 0.88
CDK13-202ENST00000340829 GUCY2CP25092 1073 aa20.55■□□□□ 0.88
CDK13-202ENST00000340829 TTC25Q96NG3 672 aa20.55■□□□□ 0.88
CDK13-202ENST00000340829 IL17RBQ9NRM6 502 aa20.55■□□□□ 0.88
CDK13-202ENST00000340829 SLC12A6Q9UHW9 1150 aa20.55■□□□□ 0.88
CDK13-202ENST00000340829 LCMT1Q9UIC8 334 aa20.55■□□□□ 0.88
CDK13-202ENST00000340829 ATMINO43313 823 aaPredicted RBP20.55■□□□□ 0.88
CDK13-202ENST00000340829 OPHN1O60890 802 aa20.55■□□□□ 0.88
CDK13-202ENST00000340829 TXNP10599 105 aaKnown RBP20.55■□□□□ 0.88
CDK13-202ENST00000340829 PRMT6Q96LA8 375 aaPredicted RBP20.55■□□□□ 0.88
CDK13-202ENST00000340829 DNAJC7Q99615 494 aa20.55■□□□□ 0.88
CDK13-202ENST00000340829 POLR3CQ9BUI4 534 aaPredicted RBP20.55■□□□□ 0.88
CDK13-202ENST00000340829 SEMA6BQ9H3T3 888 aa20.55■□□□□ 0.88
CDK13-202ENST00000340829 ELP3Q9H9T3 547 aa20.55■□□□□ 0.88
CDK13-202ENST00000340829 KLHL8Q9P2G9 620 aaPredicted RBP20.55■□□□□ 0.88
CDK13-202ENST00000340829 RAD51CO43502 376 aa20.55■□□□□ 0.88
CDK13-202ENST00000340829 PRKCEQ02156 737 aa20.55■□□□□ 0.88
CDK13-202ENST00000340829 STYK1Q6J9G0 422 aa20.55■□□□□ 0.88
CDK13-202ENST00000340829 CHORDC1Q9UHD1 332 aaPredicted RBP20.55■□□□□ 0.88
CDK13-202ENST00000340829 TMPRSS15P98073 1019 aa20.55■□□□□ 0.88
CDK13-202ENST00000340829 DBN1Q16643 649 aa20.55■□□□□ 0.88
CDK13-202ENST00000340829 ANKS1AQ92625 1134 aa20.55■□□□□ 0.88
CDK13-202ENST00000340829 VIPAS39Q9H9C1 493 aa20.55■□□□□ 0.88
CDK13-202ENST00000340829 BCL9O00512 1426 aa20.55■□□□□ 0.88
CDK13-202ENST00000340829 COL5A2P05997 1499 aaPredicted RBP20.54■□□□□ 0.88
CDK13-202ENST00000340829 ESRRAP11474 423 aaPredicted RBP20.54■□□□□ 0.88
CDK13-202ENST00000340829 MAGEA9P43362 315 aa20.54■□□□□ 0.88
CDK13-202ENST00000340829 CDKAL1Q5VV42 579 aa20.54■□□□□ 0.88
CDK13-202ENST00000340829 ADORA2BP29275 332 aa20.54■□□□□ 0.88
CDK13-202ENST00000340829 ZNF710Q8N1W2 664 aa20.54■□□□□ 0.88
CDK13-202ENST00000340829 LRFN2Q9ULH4 789 aa20.54■□□□□ 0.88
CDK13-202ENST00000340829 HPCAL4Q9UM19 191 aa20.54■□□□□ 0.88
CDK13-202ENST00000340829 INPP5FQ9Y2H2 1132 aa20.54■□□□□ 0.88
CDK13-202ENST00000340829 CARSP49589 748 aaKnown RBP20.54■□□□□ 0.88
CDK13-202ENST00000340829 ANGEL2Q5VTE6 544 aaKnown RBP20.54■□□□□ 0.88
CDK13-202ENST00000340829 RUBCNQ92622 972 aa20.54■□□□□ 0.88
CDK13-202ENST00000340829 KIF12Q96FN5 646 aa20.54■□□□□ 0.88
CDK13-202ENST00000340829 MKNK1Q9BUB5 465 aa20.54■□□□□ 0.88
CDK13-202ENST00000340829 UNC45AQ9H3U1 944 aa20.54■□□□□ 0.88
CDK13-202ENST00000340829 UVRAGQ9P2Y5 699 aa20.54■□□□□ 0.88
CDK13-202ENST00000340829 CPSF3Q9UKF6 684 aaKnown RBP20.54■□□□□ 0.88
CDK13-202ENST00000340829 AP3M2P53677 418 aa20.54■□□□□ 0.88
CDK13-202ENST00000340829 BCAR1P56945 870 aa20.54■□□□□ 0.88
CDK13-202ENST00000340829 EMC2Q15006 297 aa20.54■□□□□ 0.88
CDK13-202ENST00000340829 PPM1NQ8N819 430 aa20.54■□□□□ 0.88
CDK13-202ENST00000340829 ATG4CQ96DT6 458 aa20.54■□□□□ 0.88
CDK13-202ENST00000340829 TAAR1Q96RJ0 339 aa20.54■□□□□ 0.88
CDK13-202ENST00000340829 SUCLA2Q9P2R7 463 aaPredicted RBP20.54■□□□□ 0.88
CDK13-202ENST00000340829 ATP8B3O60423 1300 aa20.53■□□□□ 0.88
CDK13-202ENST00000340829 POLRMTO00411 1230 aaKnown RBP20.53■□□□□ 0.88
CDK13-202ENST00000340829 LPXNO60711 386 aa20.53■□□□□ 0.88
CDK13-202ENST00000340829 NCF2P19878 526 aaPredicted RBP20.53■□□□□ 0.88
CDK13-202ENST00000340829 ARSEP51690 589 aa20.53■□□□□ 0.88
CDK13-202ENST00000340829 ATG16L1Q676U5 607 aa20.53■□□□□ 0.88
CDK13-202ENST00000340829 SKA2Q8WVK7 121 aaPredicted RBP20.53■□□□□ 0.88
CDK13-202ENST00000340829 KIFC3Q9BVG8 833 aa20.53■□□□□ 0.88
CDK13-202ENST00000340829 CREB3O43889 395 aa20.53■□□□□ 0.88
CDK13-202ENST00000340829 RPS6P62753 249 aaKnown RBP20.53■□□□□ 0.88
CDK13-202ENST00000340829 DDX42Q86XP3 938 aaKnown RBP eCLIP20.53■□□□□ 0.88
CDK13-202ENST00000340829 VGLL2Q8N8G2 317 aa20.53■□□□□ 0.88
CDK13-202ENST00000340829 OR2W6PQ8NHA6 318 aa20.53■□□□□ 0.88
CDK13-202ENST00000340829 DDX56Q9NY93 547 aaKnown RBP20.53■□□□□ 0.88
CDK13-202ENST00000340829 A0A087X0T9 212 aa20.53■□□□□ 0.88
CDK13-202ENST00000340829 PIK3R2O00459 728 aa20.53■□□□□ 0.88
CDK13-202ENST00000340829 FAM228BP0C875 321 aa20.53■□□□□ 0.88
CDK13-202ENST00000340829 CDH6P55285 790 aa20.53■□□□□ 0.88
CDK13-202ENST00000340829 MMS22LQ6ZRQ5 1243 aa20.53■□□□□ 0.88
CDK13-202ENST00000340829 ZC3H18Q86VM9 953 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms