RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 ALCAMQ13740 583 aa14.1□□□□□ -0.15
SRSF3-201ENST00000339436 ZC2HC1CQ53FD0 456 aaPredicted RBP14.1□□□□□ -0.15
SRSF3-201ENST00000339436 GLB1LQ6UWU2 654 aa14.1□□□□□ -0.15
SRSF3-201ENST00000339436 MPZL3Q6UWV2 235 aa14.1□□□□□ -0.15
SRSF3-201ENST00000339436 AGMOQ6ZNB7 445 aa14.1□□□□□ -0.15
SRSF3-201ENST00000339436 HACE1Q8IYU2 909 aa14.1□□□□□ -0.15
SRSF3-201ENST00000339436 LRRC43Q8N309 656 aa14.1□□□□□ -0.15
SRSF3-201ENST00000339436 HELQQ8TDG4 1101 aa14.1□□□□□ -0.15
SRSF3-201ENST00000339436 CASD1Q96PB1 797 aa14.1□□□□□ -0.15
SRSF3-201ENST00000339436 CDT1Q9H211 546 aa14.1□□□□□ -0.15
SRSF3-201ENST00000339436 ANKFY1Q9P2R3 1169 aa14.1□□□□□ -0.15
SRSF3-201ENST00000339436 MRPL42Q9Y6G3 142 aaKnown RBP14.1□□□□□ -0.15
SRSF3-201ENST00000339436 PVALEFA0A1B0GWK0 134 aa14.09□□□□□ -0.15
SRSF3-201ENST00000339436 TOM1L1O75674 476 aa14.09□□□□□ -0.15
SRSF3-201ENST00000339436 GCNT3O95395 438 aa14.09□□□□□ -0.15
SRSF3-201ENST00000339436 PRR29P0C7W0 189 aa14.09□□□□□ -0.15
SRSF3-201ENST00000339436 MYBP10242 640 aa14.09□□□□□ -0.15
SRSF3-201ENST00000339436 ITGA4P13612 1032 aa14.09□□□□□ -0.15
SRSF3-201ENST00000339436 UBE2HP62256 183 aa14.09□□□□□ -0.15
SRSF3-201ENST00000339436 NOLC1Q14978 699 aaKnown RBP eCLIP14.09□□□□□ -0.15
SRSF3-201ENST00000339436 FAM26FQ5R3K3 315 aa14.09□□□□□ -0.15
SRSF3-201ENST00000339436 Q7L0L9 218 aa14.09□□□□□ -0.15
SRSF3-201ENST00000339436 APBB1IPQ7Z5R6 666 aaPredicted RBP14.09□□□□□ -0.15
SRSF3-201ENST00000339436 FIBCD1Q8N539 461 aa14.09□□□□□ -0.15
SRSF3-201ENST00000339436 CLP1Q92989 425 aaKnown RBP14.09□□□□□ -0.15
SRSF3-201ENST00000339436 HPS3Q969F9 1004 aa14.09□□□□□ -0.15
SRSF3-201ENST00000339436 BICD1Q96G01 975 aa14.09□□□□□ -0.15
SRSF3-201ENST00000339436 TGS1Q96RS0 853 aaKnown RBP14.09□□□□□ -0.15
SRSF3-201ENST00000339436 MRPL9Q9BYD2 267 aaKnown RBP14.09□□□□□ -0.15
SRSF3-201ENST00000339436 RSAD1Q9HA92 442 aa14.09□□□□□ -0.15
SRSF3-201ENST00000339436 INPPL1O15357 1258 aa14.08□□□□□ -0.16
SRSF3-201ENST00000339436 KLRC4O43908 158 aa14.08□□□□□ -0.16
SRSF3-201ENST00000339436 NR1I2O75469 434 aa14.08□□□□□ -0.16
SRSF3-201ENST00000339436 LIG4P49917 911 aa14.08□□□□□ -0.16
SRSF3-201ENST00000339436 ERVK-21P61565 698 aa14.08□□□□□ -0.16
SRSF3-201ENST00000339436 L1TD1Q5T7N2 865 aaKnown RBP14.08□□□□□ -0.16
SRSF3-201ENST00000339436 DEFB123Q8N688 67 aa14.08□□□□□ -0.16
SRSF3-201ENST00000339436 GLIS3Q8NEA6 775 aa14.08□□□□□ -0.16
SRSF3-201ENST00000339436 CCDC34Q96HJ3 373 aa14.08□□□□□ -0.16
SRSF3-201ENST00000339436 C17orf80Q9BSJ5 609 aa14.08□□□□□ -0.16
SRSF3-201ENST00000339436 APOL6Q9BWW8 343 aa14.08□□□□□ -0.16
SRSF3-201ENST00000339436 RNF39Q9H2S5 420 aa14.08□□□□□ -0.16
SRSF3-201ENST00000339436 SEMA6BQ9H3T3 888 aa14.08□□□□□ -0.16
SRSF3-201ENST00000339436 UBN1Q9NPG3 1134 aa14.08□□□□□ -0.16
SRSF3-201ENST00000339436 HCSTQ9UBK5 93 aa14.08□□□□□ -0.16
SRSF3-201ENST00000339436 INPP5FQ9Y2H2 1132 aa14.08□□□□□ -0.16
SRSF3-201ENST00000339436 OFD1O75665 1012 aa14.07□□□□□ -0.16
SRSF3-201ENST00000339436 RECQL4O94761 1208 aa14.07□□□□□ -0.16
SRSF3-201ENST00000339436 UBE4BO95155 1302 aa14.07□□□□□ -0.16
SRSF3-201ENST00000339436 MCF2P10911 925 aa14.07□□□□□ -0.16
SRSF3-201ENST00000339436 MLH1P40692 756 aa14.07□□□□□ -0.16
SRSF3-201ENST00000339436 MCL1Q07820 350 aa14.07□□□□□ -0.16
SRSF3-201ENST00000339436 KCNA1Q09470 495 aa14.07□□□□□ -0.16
SRSF3-201ENST00000339436 DPYDQ12882 1025 aa14.07□□□□□ -0.16
SRSF3-201ENST00000339436 POSTNQ15063 836 aa14.07□□□□□ -0.16
SRSF3-201ENST00000339436 NOMO2Q5JPE7 1267 aa14.07□□□□□ -0.16
SRSF3-201ENST00000339436 KANK3Q6NY19 840 aa14.07□□□□□ -0.16
SRSF3-201ENST00000339436 SLC39A4Q6P5W5 647 aa14.07□□□□□ -0.16
SRSF3-201ENST00000339436 STXBP4Q6ZWJ1 553 aa14.07□□□□□ -0.16
SRSF3-201ENST00000339436 CEP120Q8N960 986 aa14.07□□□□□ -0.16
SRSF3-201ENST00000339436 ZBTB45Q96K62 511 aaPredicted RBP14.07□□□□□ -0.16
SRSF3-201ENST00000339436 TIGD1Q96MW7 591 aa14.07□□□□□ -0.16
SRSF3-201ENST00000339436 FAM161BQ96MY7 647 aa14.07□□□□□ -0.16
SRSF3-201ENST00000339436 SAMD11Q96NU1 681 aa14.07□□□□□ -0.16
SRSF3-201ENST00000339436 GBP4Q96PP9 640 aa14.07□□□□□ -0.16
SRSF3-201ENST00000339436 TCHPQ9BT92 498 aa14.07□□□□□ -0.16
SRSF3-201ENST00000339436 EXOC1Q9NV70 894 aa14.07□□□□□ -0.16
SRSF3-201ENST00000339436 MTUS1Q9ULD2 1270 aa14.07□□□□□ -0.16
SRSF3-201ENST00000339436 GIT1Q9Y2X7 761 aa14.07□□□□□ -0.16
SRSF3-201ENST00000339436 RWDD3Q9Y3V2 267 aa14.07□□□□□ -0.16
SRSF3-201ENST00000339436 PCDHB13Q9Y5F0 798 aa14.07□□□□□ -0.16
SRSF3-201ENST00000339436 ARL5CA6NH57 179 aa14.06□□□□□ -0.16
SRSF3-201ENST00000339436 EPOPA6NHQ4 379 aa14.06□□□□□ -0.16
SRSF3-201ENST00000339436 EIF3DO15371 548 aaKnown RBP eCLIP14.06□□□□□ -0.16
SRSF3-201ENST00000339436 CLDN3O15551 220 aa14.06□□□□□ -0.16
SRSF3-201ENST00000339436 RPN1P04843 607 aaKnown RBP14.06□□□□□ -0.16
SRSF3-201ENST00000339436 HARSP12081 509 aaKnown RBP14.06□□□□□ -0.16
SRSF3-201ENST00000339436 AKAP5P24588 427 aa14.06□□□□□ -0.16
SRSF3-201ENST00000339436 CTNNB1P35222 781 aa14.06□□□□□ -0.16
SRSF3-201ENST00000339436 GRM5P41594 1212 aa14.06□□□□□ -0.16
SRSF3-201ENST00000339436 AFF1P51825 1210 aaKnown RBP14.06□□□□□ -0.16
SRSF3-201ENST00000339436 GRIN2CQ14957 1233 aa14.06□□□□□ -0.16
SRSF3-201ENST00000339436 LRRC55Q6ZSA7 311 aa14.06□□□□□ -0.16
SRSF3-201ENST00000339436 EPM2AIP1Q7L775 607 aaPredicted RBP14.06□□□□□ -0.16
SRSF3-201ENST00000339436 ZBTB33Q86T24 672 aa14.06□□□□□ -0.16
SRSF3-201ENST00000339436 URGCPQ8TCY9 931 aa14.06□□□□□ -0.16
SRSF3-201ENST00000339436 ARNTL2Q8WYA1 636 aa14.06□□□□□ -0.16
SRSF3-201ENST00000339436 ZFP42Q96MM3 310 aa14.06□□□□□ -0.16
SRSF3-201ENST00000339436 ACCSQ96QU6 501 aa14.06□□□□□ -0.16
SRSF3-201ENST00000339436 GAD1Q99259 594 aa14.06□□□□□ -0.16
SRSF3-201ENST00000339436 HAPLN2Q9GZV7 340 aa14.06□□□□□ -0.16
SRSF3-201ENST00000339436 CWH43Q9H720 699 aa14.06□□□□□ -0.16
SRSF3-201ENST00000339436 CERS4Q9HA82 394 aa14.06□□□□□ -0.16
SRSF3-201ENST00000339436 TYW1Q9NV66 732 aaKnown RBP14.06□□□□□ -0.16
SRSF3-201ENST00000339436 TBC1D13Q9NVG8 400 aa14.06□□□□□ -0.16
SRSF3-201ENST00000339436 SNTG2Q9NY99 539 aa14.06□□□□□ -0.16
SRSF3-201ENST00000339436 EXOC7Q9UPT5 735 aa14.06□□□□□ -0.16
SRSF3-201ENST00000339436 TISP43B9A030 160 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 C5orf67F2Z3F1 127 aa14.05□□□□□ -0.16
SRSF3-201ENST00000339436 KINO60870 393 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms