RNA–Protein interactions for RNA: ENST00000307289.10

SYVN1-202, Transcript of synoviolin 1, humanhuman

TSL 1 (best) BASIC

Gene SYVN1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-202ENST00000307289 ATP8B4Q8TF62 1192 aa17.69■□□□□ 0.42
SYVN1-202ENST00000307289 CALR3Q96L12 384 aaKnown RBP17.69■□□□□ 0.42
SYVN1-202ENST00000307289 VPS33BQ9H267 617 aa17.69■□□□□ 0.42
SYVN1-202ENST00000307289 ST6GALNAC4Q9H4F1 302 aa17.69■□□□□ 0.42
SYVN1-202ENST00000307289 CYP39A1Q9NYL5 469 aa17.69■□□□□ 0.42
SYVN1-202ENST00000307289 RGPD3A6NKT7 1758 aaPredicted RBP17.69■□□□□ 0.42
SYVN1-202ENST00000307289 RGPD4Q7Z3J3 1758 aa17.69■□□□□ 0.42
SYVN1-202ENST00000307289 DCDC2CA8MYV0 355 aa17.69■□□□□ 0.42
SYVN1-202ENST00000307289 CYP11B1P15538 503 aa17.69■□□□□ 0.42
SYVN1-202ENST00000307289 HPDP32754 393 aaPredicted RBP17.69■□□□□ 0.42
SYVN1-202ENST00000307289 BAG6P46379 1132 aa17.69■□□□□ 0.42
SYVN1-202ENST00000307289 ACOT2P49753 483 aa17.69■□□□□ 0.42
SYVN1-202ENST00000307289 SMTNP53814 917 aa17.69■□□□□ 0.42
SYVN1-202ENST00000307289 ACTR2P61160 394 aa17.69■□□□□ 0.42
SYVN1-202ENST00000307289 WHAMMQ8TF30 809 aa17.69■□□□□ 0.42
SYVN1-202ENST00000307289 UBLCP1Q8WVY7 318 aaPredicted RBP17.69■□□□□ 0.42
SYVN1-202ENST00000307289 BICD1Q96G01 975 aa17.69■□□□□ 0.42
SYVN1-202ENST00000307289 PICK1Q9NRD5 415 aa17.69■□□□□ 0.42
SYVN1-202ENST00000307289 ANKEF1Q9NU02 776 aa17.69■□□□□ 0.42
SYVN1-202ENST00000307289 BHMG1C9JSJ3 638 aaPredicted RBP17.68■□□□□ 0.42
SYVN1-202ENST00000307289 H0YGN5 161 aa17.68■□□□□ 0.42
SYVN1-202ENST00000307289 RPS6KA5O75582 802 aa17.68■□□□□ 0.42
SYVN1-202ENST00000307289 CCDC172P0C7W6 258 aa17.68■□□□□ 0.42
SYVN1-202ENST00000307289 PYGMP11217 842 aa17.68■□□□□ 0.42
SYVN1-202ENST00000307289 ATP4AP20648 1035 aa17.68■□□□□ 0.42
SYVN1-202ENST00000307289 SFNP31947 248 aa17.68■□□□□ 0.42
SYVN1-202ENST00000307289 CCT5P48643 541 aa17.68■□□□□ 0.42
SYVN1-202ENST00000307289 GPC5P78333 572 aa17.68■□□□□ 0.42
SYVN1-202ENST00000307289 KRT39Q6A163 491 aa17.68■□□□□ 0.42
SYVN1-202ENST00000307289 HAPLN2Q9GZV7 340 aa17.68■□□□□ 0.42
SYVN1-202ENST00000307289 JPH1Q9HDC5 661 aaPredicted RBP17.68■□□□□ 0.42
SYVN1-202ENST00000307289 NFS1Q9Y697 457 aa17.68■□□□□ 0.42
SYVN1-202ENST00000307289 PTPRJQ12913 1337 aa17.68■□□□□ 0.42
SYVN1-202ENST00000307289 CFHP08603 1231 aa17.68■□□□□ 0.42
SYVN1-202ENST00000307289 KRT5P13647 590 aa17.68■□□□□ 0.42
SYVN1-202ENST00000307289 DSG3P32926 999 aa17.68■□□□□ 0.42
SYVN1-202ENST00000307289 SF3B2Q13435 895 aaKnown RBP17.68■□□□□ 0.42
SYVN1-202ENST00000307289 ALCAMQ13740 583 aa17.68■□□□□ 0.42
SYVN1-202ENST00000307289 MREGQ8N565 214 aa17.68■□□□□ 0.42
SYVN1-202ENST00000307289 SHC3Q92529 594 aa17.68■□□□□ 0.42
SYVN1-202ENST00000307289 NUP85Q9BW27 656 aa17.68■□□□□ 0.42
SYVN1-202ENST00000307289 TRPC6Q9Y210 931 aa17.68■□□□□ 0.42
SYVN1-202ENST00000307289 RRP15Q9Y3B9 282 aaKnown RBP17.68■□□□□ 0.42
SYVN1-202ENST00000307289 EDN1P05305 212 aa17.67■□□□□ 0.42
SYVN1-202ENST00000307289 IRX5P78411 483 aaPredicted RBP17.67■□□□□ 0.42
SYVN1-202ENST00000307289 CYP24A1Q07973 514 aa17.67■□□□□ 0.42
SYVN1-202ENST00000307289 TTC27Q6P3X3 843 aa17.67■□□□□ 0.42
SYVN1-202ENST00000307289 C10orf67Q8IYJ2 551 aa17.67■□□□□ 0.42
SYVN1-202ENST00000307289 POLR3FQ9H1D9 316 aaPredicted RBP17.67■□□□□ 0.42
SYVN1-202ENST00000307289 RAB20Q9NX57 234 aa17.67■□□□□ 0.42
SYVN1-202ENST00000307289 BCCIPQ9P287 314 aaKnown RBP eCLIP17.67■□□□□ 0.42
SYVN1-202ENST00000307289 SNX24Q9Y343 169 aa17.67■□□□□ 0.42
SYVN1-202ENST00000307289 RLFQ13129 1914 aa17.67■□□□□ 0.42
SYVN1-202ENST00000307289 CHADLQ6NUI6 762 aa17.67■□□□□ 0.42
SYVN1-202ENST00000307289 SEPT14Q6ZU15 432 aa17.67■□□□□ 0.42
SYVN1-202ENST00000307289 SRLQ86TD4 932 aa17.67■□□□□ 0.42
SYVN1-202ENST00000307289 NSUN6Q8TEA1 469 aaKnown RBP17.67■□□□□ 0.42
SYVN1-202ENST00000307289 CYP26B1Q9NR63 512 aa17.67■□□□□ 0.42
SYVN1-202ENST00000307289 SLC9A2Q9UBY0 812 aa17.67■□□□□ 0.42
SYVN1-202ENST00000307289 CCDC188H7C350 402 aa17.67■□□□□ 0.42
SYVN1-202ENST00000307289 GRIN3BO60391 1043 aa17.67■□□□□ 0.42
SYVN1-202ENST00000307289 RTN2O75298 545 aa17.67■□□□□ 0.42
SYVN1-202ENST00000307289 CTNNA1P35221 906 aaKnown RBP17.67■□□□□ 0.42
SYVN1-202ENST00000307289 KCNJ1P48048 391 aa17.67■□□□□ 0.42
SYVN1-202ENST00000307289 DHX9Q08211 1270 aaKnown RBP17.67■□□□□ 0.42
SYVN1-202ENST00000307289 ZNF844Q08AG5 666 aa17.67■□□□□ 0.42
SYVN1-202ENST00000307289 FBXL13Q8NEE6 735 aa17.67■□□□□ 0.42
SYVN1-202ENST00000307289 BCAS4Q8TDM0 211 aa17.67■□□□□ 0.42
SYVN1-202ENST00000307289 DDX1Q92499 740 aaKnown RBP17.67■□□□□ 0.42
SYVN1-202ENST00000307289 PDLIM7Q9NR12 457 aa17.67■□□□□ 0.42
SYVN1-202ENST00000307289 ATP8A1Q9Y2Q0 1164 aa17.67■□□□□ 0.42
SYVN1-202ENST00000307289 TTLL13PA6NNM8 815 aa17.66■□□□□ 0.42
SYVN1-202ENST00000307289 MYO1CO00159 1063 aa17.66■□□□□ 0.42
SYVN1-202ENST00000307289 NLRP11P59045 1033 aaKnown RBP17.66■□□□□ 0.42
SYVN1-202ENST00000307289 TGFB2P61812 414 aa17.66■□□□□ 0.42
SYVN1-202ENST00000307289 DR1Q01658 176 aa17.66■□□□□ 0.42
SYVN1-202ENST00000307289 EEPD1Q7L9B9 569 aa17.66■□□□□ 0.42
SYVN1-202ENST00000307289 PRELID2Q8N945 189 aa17.66■□□□□ 0.42
SYVN1-202ENST00000307289 CPA5Q8WXQ8 436 aa17.66■□□□□ 0.42
SYVN1-202ENST00000307289 ZNF653Q96CK0 615 aa17.66■□□□□ 0.42
SYVN1-202ENST00000307289 CARD9Q9H257 536 aa17.66■□□□□ 0.42
SYVN1-202ENST00000307289 TMEM8AQ9HCN3 771 aa17.66■□□□□ 0.42
SYVN1-202ENST00000307289 MYO1FO00160 1098 aa17.66■□□□□ 0.42
SYVN1-202ENST00000307289 TULP2O00295 520 aa17.66■□□□□ 0.42
SYVN1-202ENST00000307289 P4HA2O15460 535 aa17.66■□□□□ 0.42
SYVN1-202ENST00000307289 PEX5P50542 639 aa17.66■□□□□ 0.42
SYVN1-202ENST00000307289 HIRAP54198 1017 aaPredicted RBP17.66■□□□□ 0.42
SYVN1-202ENST00000307289 PTENP60484 403 aa17.66■□□□□ 0.42
SYVN1-202ENST00000307289 CUL1Q13616 776 aa17.66■□□□□ 0.42
SYVN1-202ENST00000307289 ABHD15Q6UXT9 468 aa17.66■□□□□ 0.42
SYVN1-202ENST00000307289 GPRASP2Q96D09 838 aa17.66■□□□□ 0.42
SYVN1-202ENST00000307289 MFSD14AQ96MC6 490 aa17.66■□□□□ 0.42
SYVN1-202ENST00000307289 ZSWIM1Q9BR11 485 aa17.66■□□□□ 0.42
SYVN1-202ENST00000307289 MAP3K20Q9NYL2 800 aaKnown RBP17.66■□□□□ 0.42
SYVN1-202ENST00000307289 GGA3Q9NZ52 723 aa17.66■□□□□ 0.42
SYVN1-202ENST00000307289 PTPN22Q9Y2R2 807 aa17.66■□□□□ 0.42
SYVN1-202ENST00000307289 WDR81Q562E7 1941 aa17.65■□□□□ 0.42
SYVN1-202ENST00000307289 LOXHD1Q8IVV2 1947 aa17.65■□□□□ 0.42
SYVN1-202ENST00000307289 ATP8B3O60423 1300 aa17.65■□□□□ 0.42
SYVN1-202ENST00000307289 EIF3HO15372 352 aaKnown RBP eCLIP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms