RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 DDX11Q96FC9 970 aa5.26□□□□□ -1.57
CD44-202ENST00000278385 CCDC34Q96HJ3 373 aa5.26□□□□□ -1.57
CD44-202ENST00000278385 RSRC1Q96IZ7 334 aaKnown RBP5.26□□□□□ -1.57
CD44-202ENST00000278385 CHAMP1Q96JM3 812 aa5.26□□□□□ -1.57
CD44-202ENST00000278385 MRGPRX3Q96LB0 322 aa5.26□□□□□ -1.57
CD44-202ENST00000278385 ZMAT2Q96NC0 199 aaKnown RBP5.26□□□□□ -1.57
CD44-202ENST00000278385 AARSD1Q9BTE6 412 aaKnown RBP5.26□□□□□ -1.57
CD44-202ENST00000278385 XPO4Q9C0E2 1151 aaKnown RBP5.26□□□□□ -1.57
CD44-202ENST00000278385 NMRK2Q9NPI5 230 aa5.26□□□□□ -1.57
CD44-202ENST00000278385 HELLSQ9NRZ9 838 aa5.26□□□□□ -1.57
CD44-202ENST00000278385 BTG4Q9NY30 223 aa5.26□□□□□ -1.57
CD44-202ENST00000278385 CLEC1BQ9P126 229 aa5.26□□□□□ -1.57
CD44-202ENST00000278385 PPARGC1AQ9UBK2 798 aaKnown RBP5.26□□□□□ -1.57
CD44-202ENST00000278385 EBF1Q9UH73 591 aa5.26□□□□□ -1.57
CD44-202ENST00000278385 ACSL6Q9UKU0 697 aa5.26□□□□□ -1.57
CD44-202ENST00000278385 SNX5Q9Y5X3 404 aa5.26□□□□□ -1.57
CD44-202ENST00000278385 KIF1AQ12756 1690 aa5.26□□□□□ -1.57
CD44-202ENST00000278385 COL22A1Q8NFW1 1626 aaPredicted RBP5.26□□□□□ -1.57
CD44-202ENST00000278385 RGS12O14924 1447 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 A0A1W2PQU0 124 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 TCAF2A6NFQ2 919 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 TRIM75PA6NK02 468 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 A6NNZ2 444 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 M0R2C6 588 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 TPP1O14773 563 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 OPA1O60313 960 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 MAFKO60675 156 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 PEX10O60683 326 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 CTNND1O60716 968 aaKnown RBP5.25□□□□□ -1.57
CD44-202ENST00000278385 INMTO95050 263 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 ZBED1O96006 694 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 GCP02774 474 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 HRGP04196 525 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 IDEP14735 1019 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 GALNSP34059 522 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 DEKP35659 375 aaKnown RBP5.25□□□□□ -1.57
CD44-202ENST00000278385 RAP1GAPP47736 663 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 SNX16P57768 344 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 ODF1Q14990 250 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 TERF2Q15554 542 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 IQSEC1Q6DN90 963 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 HIBCHQ6NVY1 386 aaPredicted RBP5.25□□□□□ -1.57
CD44-202ENST00000278385 MYCT1Q8N699 235 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 NLGN2Q8NFZ4 835 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 SLC7A14Q8TBB6 771 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 AFAP1L1Q8TED9 768 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 TBC1D31Q96DN5 1066 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 TAAR9Q96RI9 348 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 SEC62Q99442 399 aaKnown RBP5.25□□□□□ -1.57
CD44-202ENST00000278385 MMP19Q99542 508 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 FAM167BQ9BTA0 163 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 ZCCHC17Q9NP64 241 aaKnown RBP5.25□□□□□ -1.57
CD44-202ENST00000278385 GPRC5CQ9NQ84 441 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 LRCH1Q9Y2L9 728 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 COA3Q9Y2R0 106 aaPredicted RBP5.25□□□□□ -1.57
CD44-202ENST00000278385 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.25□□□□□ -1.57
CD44-202ENST00000278385 ATP7BP35670 1465 aa5.25□□□□□ -1.57
CD44-202ENST00000278385 PPIP5K1Q6PFW1 1433 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 ANKRD18BA2A2Z9 1011 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 TRIM64CA6NLI5 447 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 NUDT19A8MXV4 375 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 HRKO00198 91 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 SEMA7AO75326 666 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 DDX58O95786 925 aaKnown RBP5.24□□□□□ -1.57
CD44-202ENST00000278385 CYBBP04839 570 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 THBDP07204 575 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 JMJD7P0C870 316 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 GYS1P13807 737 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 YBX3P16989 372 aaKnown RBP eCLIP5.24□□□□□ -1.57
CD44-202ENST00000278385 KRT20P35900 424 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 SCNN1BP51168 640 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 GALK1P51570 392 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 ERVFRD-1P60508 538 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 RPL11P62913 178 aaKnown RBP5.24□□□□□ -1.57
CD44-202ENST00000278385 PPP2R2AP63151 447 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 SUMO1P63165 101 aaKnown RBP5.24□□□□□ -1.57
CD44-202ENST00000278385 SRSF3P84103 164 aaKnown RBP5.24□□□□□ -1.57
CD44-202ENST00000278385 FAPQ12884 760 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 MTA1Q13330 715 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 KLF1Q13351 362 aaPredicted RBP5.24□□□□□ -1.57
CD44-202ENST00000278385 DCTN1Q14203 1278 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 CCDC158Q5M9N0 1113 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 GPATCH4Q5T3I0 446 aaKnown RBP5.24□□□□□ -1.57
CD44-202ENST00000278385 ZC3H14Q6PJT7 736 aaKnown RBP5.24□□□□□ -1.57
CD44-202ENST00000278385 PAQR3Q6TCH7 311 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 GPR155Q7Z3F1 870 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 KRT27Q7Z3Y8 459 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 BRAPQ7Z569 592 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 FGD2Q7Z6J4 655 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 ANKRD13BQ86YJ7 626 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 PPIL6Q8IXY8 311 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 KCNH5Q8NCM2 988 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 TMEM52Q8NDY8 209 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 C1orf162Q8NEQ5 155 aaPredicted RBP5.24□□□□□ -1.57
CD44-202ENST00000278385 BHLHE22Q8NFJ8 381 aaPredicted RBP5.24□□□□□ -1.57
CD44-202ENST00000278385 COPS5Q92905 334 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 ATP6V1E2Q96A05 226 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 SH3KBP1Q96B97 665 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 FAXDC2Q96IV6 333 aa5.24□□□□□ -1.57
CD44-202ENST00000278385 NUDT16L1Q9BRJ7 211 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms