RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 SYNGAP1Q96PV0 1343 aa13.96□□□□□ -0.18
NEK9-201ENST00000238616 ZFXP17010 805 aaPredicted RBP13.96□□□□□ -0.18
NEK9-201ENST00000238616 DEPDC7Q96QD5 511 aa13.96□□□□□ -0.18
NEK9-201ENST00000238616 GCOM2Q9BZD3 368 aaPredicted RBP13.96□□□□□ -0.18
NEK9-201ENST00000238616 A8MXQ7 604 aa13.96□□□□□ -0.18
NEK9-201ENST00000238616 KRT38O76015 456 aa13.96□□□□□ -0.18
NEK9-201ENST00000238616 ALDH18A1P54886 795 aaKnown RBP13.96□□□□□ -0.18
NEK9-201ENST00000238616 C16orf72Q14CZ0 275 aa13.96□□□□□ -0.18
NEK9-201ENST00000238616 KRT31Q15323 416 aa13.96□□□□□ -0.18
NEK9-201ENST00000238616 ALG13Q9NP73 1137 aaKnown RBP13.96□□□□□ -0.18
NEK9-201ENST00000238616 MMP10P09238 476 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 ZNF445P59923 1031 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 HIBCHQ6NVY1 386 aaPredicted RBP13.95□□□□□ -0.18
NEK9-201ENST00000238616 LRRC8BQ6P9F7 803 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 MRPL4Q9BYD3 311 aaKnown RBP13.95□□□□□ -0.18
NEK9-201ENST00000238616 MRPL40Q9NQ50 206 aaKnown RBP13.95□□□□□ -0.18
NEK9-201ENST00000238616 PCDHGA4Q9Y5G9 962 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.95□□□□□ -0.18
NEK9-201ENST00000238616 CALB1P05937 261 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 CAPN1P07384 714 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 ADCK1Q86TW2 530 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 LCORLQ8N3X6 602 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 FAM196BA6NMK8 535 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 KRT39Q6A163 491 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 ADAMTS1Q9UHI8 967 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 CDC23Q9UJX2 597 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 RRP15Q9Y3B9 282 aaKnown RBP13.95□□□□□ -0.18
NEK9-201ENST00000238616 APOL1O14791 398 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 APOA1P02647 267 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 TPI1P60174 286 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 CYTH1Q15438 398 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 FBXW10Q5XX13 1052 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 ANGPT2O15123 496 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 PHKG2P15735 406 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 GFPT1Q06210 699 aaPredicted RBP13.95□□□□□ -0.18
NEK9-201ENST00000238616 TRIP4Q15650 581 aaPredicted RBP13.95□□□□□ -0.18
NEK9-201ENST00000238616 PARD3Q8TEW0 1356 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 TARSL2A2RTX5 802 aaKnown RBP13.95□□□□□ -0.18
NEK9-201ENST00000238616 APRTP07741 180 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 LRRC36Q1X8D7 754 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 HORMAD1Q86X24 394 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 SPATA16Q9BXB7 569 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 IL1RL2Q9HB29 575 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 SPASTQ9UBP0 616 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 PCDHA6Q9UN73 950 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 PCDHA8Q9Y5H6 950 aa13.95□□□□□ -0.18
NEK9-201ENST00000238616 NLRP11P59045 1033 aaKnown RBP13.94□□□□□ -0.18
NEK9-201ENST00000238616 APBA1Q02410 837 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 TRIM62Q9BVG3 475 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 CNTRLQ7Z7A1 2325 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 TBC1D4O60343 1298 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 BBOX1O75936 387 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 FKBP9O95302 570 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 IL10P22301 178 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 IL13P35225 146 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 E2F4Q16254 413 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 CENPPQ6IPU0 288 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 FKBP9P1Q75LS8 142 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.94□□□□□ -0.18
NEK9-201ENST00000238616 FAM160B2Q86V87 743 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 APOL5Q9BWW9 433 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 RNF26Q9BY78 433 aaPredicted RBP13.94□□□□□ -0.18
NEK9-201ENST00000238616 SRP68Q9UHB9 627 aaKnown RBP13.94□□□□□ -0.18
NEK9-201ENST00000238616 ZNF711Q9Y462 761 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 PODXLO00592 558 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 SDC4P31431 198 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 SULT1E1P49888 294 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 POLR3FQ9H1D9 316 aaPredicted RBP13.94□□□□□ -0.18
NEK9-201ENST00000238616 RASSF10A6NK89 507 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 NDUFS3O75489 264 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 MMP1P03956 469 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 ZNF614Q8N883 585 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 TMEM60Q9H2L4 133 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 ZSWIM5Q9P217 1185 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 GABBR1Q9UBS5 961 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 STAP1Q9ULZ2 295 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 PDGFRBP09619 1106 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 RALBP11234 206 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 TYK2P29597 1187 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 SERPINB10P48595 397 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 PKP1Q13835 747 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 TOMM20Q15388 145 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 RBM41Q96IZ5 413 aaKnown RBP13.94□□□□□ -0.18
NEK9-201ENST00000238616 CARD14Q9BXL6 1004 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 CD274Q9NZQ7 290 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 AATKQ6ZMQ8 1374 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 TGS1Q96RS0 853 aaKnown RBP13.94□□□□□ -0.18
NEK9-201ENST00000238616 RRAGDQ9NQL2 400 aaPredicted RBP13.94□□□□□ -0.18
NEK9-201ENST00000238616 ABCA5Q8WWZ7 1642 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 MYH13Q9UKX3 1938 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 RASSF9O75901 435 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 MLH1P40692 756 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 CDH6P55285 790 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 ARHGAP17Q68EM7 881 aa13.94□□□□□ -0.18
NEK9-201ENST00000238616 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.94□□□□□ -0.18
NEK9-201ENST00000238616 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.94□□□□□ -0.18
NEK9-201ENST00000238616 ALDH1A3P47895 512 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 FBXO18Q8NFZ0 1043 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 RABGGTAQ92696 567 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 FAM162AQ96A26 154 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms