RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 SLC39A4Q6P5W5 647 aa25.87■■□□□ 1.73
HOMER3-201ENST00000221222 NUP62CLQ9H1M0 184 aa25.87■■□□□ 1.73
HOMER3-201ENST00000221222 PCDHB7Q9Y5E2 793 aa25.87■■□□□ 1.73
HOMER3-201ENST00000221222 UNC80Q8N2C7 3258 aa25.87■■□□□ 1.73
HOMER3-201ENST00000221222 TMEM265A0A087WTH1 108 aa25.86■■□□□ 1.73
HOMER3-201ENST00000221222 PTMSP20962 102 aa25.86■■□□□ 1.73
HOMER3-201ENST00000221222 HOXD13P35453 343 aa25.86■■□□□ 1.73
HOMER3-201ENST00000221222 ZNF568Q3ZCX4 644 aa25.86■■□□□ 1.73
HOMER3-201ENST00000221222 TMCO2Q7Z6W1 182 aaPredicted RBP25.86■■□□□ 1.73
HOMER3-201ENST00000221222 SMG8Q8ND04 991 aaKnown RBP25.86■■□□□ 1.73
HOMER3-201ENST00000221222 PBX4Q9BYU1 374 aa25.86■■□□□ 1.73
HOMER3-201ENST00000221222 GTPBP4Q9BZE4 634 aaKnown RBP25.86■■□□□ 1.73
HOMER3-201ENST00000221222 TRIM6Q9C030 488 aaPredicted RBP25.86■■□□□ 1.73
HOMER3-201ENST00000221222 CDT1Q9H211 546 aa25.86■■□□□ 1.73
HOMER3-201ENST00000221222 ZNF576Q9H609 170 aa25.86■■□□□ 1.73
HOMER3-201ENST00000221222 LRFN2Q9ULH4 789 aa25.86■■□□□ 1.73
HOMER3-201ENST00000221222 IPPQ9Y573 584 aa25.86■■□□□ 1.73
HOMER3-201ENST00000221222 STYXL1Q9Y6J8 313 aa25.86■■□□□ 1.73
HOMER3-201ENST00000221222 ZMYM2Q9UBW7 1377 aa25.86■■□□□ 1.73
HOMER3-201ENST00000221222 COL4A6Q14031 1691 aa25.85■■□□□ 1.73
HOMER3-201ENST00000221222 CLDN3O15551 220 aa25.85■■□□□ 1.73
HOMER3-201ENST00000221222 UPP2O95045 317 aa25.85■■□□□ 1.73
HOMER3-201ENST00000221222 MCF2P10911 925 aa25.85■■□□□ 1.73
HOMER3-201ENST00000221222 MCL1Q07820 350 aa25.85■■□□□ 1.73
HOMER3-201ENST00000221222 FNDC1Q4ZHG4 1894 aaPredicted RBP25.85■■□□□ 1.73
HOMER3-201ENST00000221222 PGBD4Q96DM1 585 aa25.85■■□□□ 1.73
HOMER3-201ENST00000221222 ZBTB45Q96K62 511 aaPredicted RBP25.85■■□□□ 1.73
HOMER3-201ENST00000221222 TCHPQ9BT92 498 aa25.85■■□□□ 1.73
HOMER3-201ENST00000221222 KIAA1468Q9P260 1216 aa25.85■■□□□ 1.73
HOMER3-201ENST00000221222 EYSQ5T1H1 3165 aa25.85■■□□□ 1.73
HOMER3-201ENST00000221222 CDH23Q9H251 3354 aa25.85■■□□□ 1.73
HOMER3-201ENST00000221222 ANKRD63C9JTQ0 380 aa25.84■■□□□ 1.73
HOMER3-201ENST00000221222 DGKIO75912 1065 aa25.84■■□□□ 1.73
HOMER3-201ENST00000221222 HTRA4P83105 476 aaPredicted RBP25.84■■□□□ 1.73
HOMER3-201ENST00000221222 NOLC1Q14978 699 aaKnown RBP eCLIP25.84■■□□□ 1.73
HOMER3-201ENST00000221222 ZNF658Q5TYW1 1059 aaPredicted RBP25.84■■□□□ 1.73
HOMER3-201ENST00000221222 SYCP3Q8IZU3 236 aa25.84■■□□□ 1.73
HOMER3-201ENST00000221222 IKZF4Q9H2S9 585 aa25.84■■□□□ 1.73
HOMER3-201ENST00000221222 RC3H2Q9HBD1 1191 aaKnown RBP25.84■■□□□ 1.73
HOMER3-201ENST00000221222 ANKFY1Q9P2R3 1169 aa25.84■■□□□ 1.73
HOMER3-201ENST00000221222 MAN1B1Q9UKM7 699 aa25.84■■□□□ 1.73
HOMER3-201ENST00000221222 GDAQ9Y2T3 454 aa25.84■■□□□ 1.73
HOMER3-201ENST00000221222 COBLL1Q53SF7 1204 aa25.83■■□□□ 1.73
HOMER3-201ENST00000221222 SLFN12LQ6IEE8 588 aa25.83■■□□□ 1.73
HOMER3-201ENST00000221222 HACE1Q8IYU2 909 aa25.83■■□□□ 1.73
HOMER3-201ENST00000221222 HAPLN2Q9GZV7 340 aa25.83■■□□□ 1.73
HOMER3-201ENST00000221222 NXF3Q9H4D5 531 aaKnown RBP25.83■■□□□ 1.73
HOMER3-201ENST00000221222 A0A0B4J269 797 aa25.82■■□□□ 1.72
HOMER3-201ENST00000221222 HOXA2O43364 376 aa25.82■■□□□ 1.72
HOMER3-201ENST00000221222 KNOP1Q1ED39 458 aaKnown RBP25.82■■□□□ 1.72
HOMER3-201ENST00000221222 FAM117BQ6P1L5 589 aa25.82■■□□□ 1.72
HOMER3-201ENST00000221222 AGMOQ6ZNB7 445 aa25.82■■□□□ 1.72
HOMER3-201ENST00000221222 ZBTB33Q86T24 672 aa25.82■■□□□ 1.72
HOMER3-201ENST00000221222 GUF1Q8N442 669 aaKnown RBP25.82■■□□□ 1.72
HOMER3-201ENST00000221222 RNF169Q8NCN4 708 aa25.82■■□□□ 1.72
HOMER3-201ENST00000221222 ZNF689Q96CS4 500 aaPredicted RBP25.82■■□□□ 1.72
HOMER3-201ENST00000221222 RAD9AQ99638 391 aa25.82■■□□□ 1.72
HOMER3-201ENST00000221222 ZBED2Q9BTP6 218 aa25.82■■□□□ 1.72
HOMER3-201ENST00000221222 GBP3Q9H0R5 595 aa25.82■■□□□ 1.72
HOMER3-201ENST00000221222 RNF19AQ9NV58 838 aa25.82■■□□□ 1.72
HOMER3-201ENST00000221222 HES2Q9Y543 173 aa25.82■■□□□ 1.72
HOMER3-201ENST00000221222 INSL6Q9Y581 213 aa25.82■■□□□ 1.72
HOMER3-201ENST00000221222 TISP43B9A030 160 aa25.82■■□□□ 1.72
HOMER3-201ENST00000221222 KIF20AO95235 890 aa25.82■■□□□ 1.72
HOMER3-201ENST00000221222 ITGA4P13612 1032 aa25.82■■□□□ 1.72
HOMER3-201ENST00000221222 IBSPP21815 317 aaPredicted RBP25.82■■□□□ 1.72
HOMER3-201ENST00000221222 ADSSP30520 456 aa25.82■■□□□ 1.72
HOMER3-201ENST00000221222 SNRPFP62306 86 aaKnown RBP25.82■■□□□ 1.72
HOMER3-201ENST00000221222 MORC3Q14149 939 aa25.82■■□□□ 1.72
HOMER3-201ENST00000221222 NELFCDQ8IXH7 590 aa25.82■■□□□ 1.72
HOMER3-201ENST00000221222 TRIML1Q8N9V2 468 aa25.82■■□□□ 1.72
HOMER3-201ENST00000221222 RSPH1Q8WYR4 309 aa25.82■■□□□ 1.72
HOMER3-201ENST00000221222 LPPQ93052 612 aa25.82■■□□□ 1.72
HOMER3-201ENST00000221222 RNF39Q9H2S5 420 aa25.82■■□□□ 1.72
HOMER3-201ENST00000221222 UBN1Q9NPG3 1134 aa25.82■■□□□ 1.72
HOMER3-201ENST00000221222 PCDHA11Q9Y5I1 949 aa25.82■■□□□ 1.72
HOMER3-201ENST00000221222 PRUNE2Q8WUY3 3088 aa25.81■■□□□ 1.72
HOMER3-201ENST00000221222 MEIS3P2A8K0S8 358 aa25.81■■□□□ 1.72
HOMER3-201ENST00000221222 TGFB1I1O43294 461 aa25.81■■□□□ 1.72
HOMER3-201ENST00000221222 TLL1O43897 1013 aa25.81■■□□□ 1.72
HOMER3-201ENST00000221222 FAM189A1O60320 539 aa25.81■■□□□ 1.72
HOMER3-201ENST00000221222 FGFR1P11362 822 aa25.81■■□□□ 1.72
HOMER3-201ENST00000221222 GARTP22102 1010 aa25.81■■□□□ 1.72
HOMER3-201ENST00000221222 GRM5P41594 1212 aa25.81■■□□□ 1.72
HOMER3-201ENST00000221222 CLLU1OSQ5K130 101 aa25.81■■□□□ 1.72
HOMER3-201ENST00000221222 CEP120Q8N960 986 aa25.81■■□□□ 1.72
HOMER3-201ENST00000221222 COL25A1Q9BXS0 654 aaPredicted RBP25.81■■□□□ 1.72
HOMER3-201ENST00000221222 CGNQ9P2M7 1197 aaKnown RBP25.81■■□□□ 1.72
HOMER3-201ENST00000221222 GIT1Q9Y2X7 761 aa25.81■■□□□ 1.72
HOMER3-201ENST00000221222 MATR3P43243 847 aaKnown RBP eCLIP25.8■■□□□ 1.72
HOMER3-201ENST00000221222 RABGGTBP53611 331 aa25.8■■□□□ 1.72
HOMER3-201ENST00000221222 KYAT1Q16773 422 aa25.8■■□□□ 1.72
HOMER3-201ENST00000221222 RBM43Q6ZSC3 357 aaKnown RBP25.8■■□□□ 1.72
HOMER3-201ENST00000221222 SMYD4Q8IYR2 804 aaPredicted RBP25.8■■□□□ 1.72
HOMER3-201ENST00000221222 SP7Q8TDD2 431 aaPredicted RBP25.8■■□□□ 1.72
HOMER3-201ENST00000221222 YME1L1Q96TA2 773 aa25.8■■□□□ 1.72
HOMER3-201ENST00000221222 MSTO1Q9BUK6 570 aa25.8■■□□□ 1.72
HOMER3-201ENST00000221222 TMEM117Q9H0C3 514 aa25.8■■□□□ 1.72
HOMER3-201ENST00000221222 NKX2-4Q9H2Z4 354 aa25.8■■□□□ 1.72
HOMER3-201ENST00000221222 KCTD10Q9H3F6 313 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms