RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Smtnl2Q8CI12 456 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ccdc80Q8R2G6 949 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 LrmdaQ9D9B4 229 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Gipc2Q9Z2H7 314 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Gemin5Q8BX17 1502 aaKnown RBP12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 CpdO89001 1377 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Gm43738A0A0G2JEA5 862 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Zfp984A2A7A2 547 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Vmn2r71L7N2D8 855 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Akr1b7P21300 316 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 ThrspQ62264 150 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Baiap3Q80TT2 1134 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Q8BGN9 141 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Slc39a11Q8BWY7 342 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Abi1Q8CBW3 481 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Adprhl2Q8CG72 370 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Trim32Q8CH72 655 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ska2Q9CR46 120 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Tbk1Q9WUN2 729 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Gm9774A0A0A6YVU8 407 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Kcna1P16388 495 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Trim71Q1PSW8 855 aaKnown RBP12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Pbxip1Q3TVI8 727 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Lrrn2Q6PHP6 730 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Akap7Q7TN79 314 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Pdzph1Q8BGR1 1238 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 TbckQ8BM85 762 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Rd3Q8BRE0 195 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Anapc5Q8BTZ4 740 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ggt7Q99JP7 662 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ccdc103Q9D9P2 237 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Cul3Q9JLV5 768 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Map1bP14873 2464 aaKnown RBP12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Znf746Q3U133 652 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Atp13a4Q5XF90 1193 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Serpinb3dQ6UKZ0 387 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Gnl3Q8CI11 538 aaKnown RBP12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Dppa3Q8QZY3 150 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Prkag2Q91WG5 566 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Trim10Q9WUH5 489 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Guca2bO09051 106 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Pou6f1Q07916 301 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Fam193bQ3U2K0 892 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Adad1Q5SUE7 619 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Stxbp2Q64324 593 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ccdc90bQ8C3X2 256 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Snf8Q9CZ28 258 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Abhd2Q9QXM0 425 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Nfu1Q9QZ23 255 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Rfwd2Q9R1A8 733 aaKnown RBP12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Fgd3O88842 733 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 AgtP11859 477 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Faf1P54731 649 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Fam47cQ14BE7 430 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 FntaQ61239 377 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Npdc1Q64322 332 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Prpsap2Q8R574 369 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Rpap2Q8VC34 614 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Aipl1Q924K1 328 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 NptxrQ99J85 493 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 MajinQ9D992 256 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Mcf2A2AEU1 1111 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 1700003F12RikA2AKE5 210 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 OatP29758 439 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Klra9Q2TJJ8 266 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Gm4981Q3ULJ8 291 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Upf3bQ3ULL6 472 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 FcgrtQ61559 365 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Avpr1aQ62463 423 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ube3cQ80U95 1083 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Epha10Q8BYG9 1007 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 4932411N23RikQ8C0S0 470 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 TwnkQ8CIW5 685 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Agap3Q8VHH5 910 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Mrpl11Q9CQF0 192 aaKnown RBP12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Adrm1Q9JKV1 407 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Fut8Q9WTS2 575 aa12.37□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Btbd18A0A0A6YY25 723 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Akap17bA2A3V1 959 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Lrrc63A6H694 637 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Krt80Q0VBK2 452 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 RubcnlQ3TD16 648 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Klra5Q60652 266 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Lrrc8eQ66JT1 795 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 OplahQ8K010 1288 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Trpm8Q8R4D5 1104 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Lman1lQ8VCD3 505 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Micu3Q9CTY5 523 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Mad2l2Q9D752 211 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Doc2gQ9ESN1 387 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Nr1h3Q9Z0Y9 445 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Map4k1P70218 827 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Dab2ipQ3UHC7 1189 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ugt1a9Q62452 528 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ireb2Q811J3 963 aaKnown RBP12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Galnt5Q8C102 930 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Cmtm5Q9D6G9 156 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ap2b1Q9DBG3 937 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Nme3Q9WV85 169 aa12.36□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Cep170bQ80U49 1574 aa12.36□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 10.2 ms