RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 Stx17Q9D0I4 301 aa16.05■□□□□ 0.16
Trim11-203ENSMUST00000108810 Rasgef1cQ9D300 466 aa16.05■□□□□ 0.16
Trim11-203ENSMUST00000108810 Tmem206Q9D771 350 aa16.05■□□□□ 0.16
Trim11-203ENSMUST00000108810 Rnf225Q9D7D1 332 aa16.05■□□□□ 0.16
Trim11-203ENSMUST00000108810 Prpf4Q9DAW6 521 aaKnown RBP16.05■□□□□ 0.16
Trim11-203ENSMUST00000108810 GclmO09172 274 aaKnown RBP16.04■□□□□ 0.16
Trim11-203ENSMUST00000108810 Tagap1P0CAX8 505 aa16.04■□□□□ 0.16
Trim11-203ENSMUST00000108810 Kif2aP28740 705 aa16.04■□□□□ 0.16
Trim11-203ENSMUST00000108810 Tnni3P48787 211 aa16.04■□□□□ 0.16
Trim11-203ENSMUST00000108810 Il6stQ00560 917 aa16.04■□□□□ 0.16
Trim11-203ENSMUST00000108810 Fgfr1opQ66JX5 399 aa16.04■□□□□ 0.16
Trim11-203ENSMUST00000108810 Mtmr10Q7TPM9 771 aa16.04■□□□□ 0.16
Trim11-203ENSMUST00000108810 Cfap100Q80VN0 613 aa16.04■□□□□ 0.16
Trim11-203ENSMUST00000108810 Haus1Q8BHX1 278 aa16.04■□□□□ 0.16
Trim11-203ENSMUST00000108810 Ablim1Q8K4G5 861 aa16.04■□□□□ 0.16
Trim11-203ENSMUST00000108810 Dact1Q8R4A3 778 aa16.04■□□□□ 0.16
Trim11-203ENSMUST00000108810 Olfr390Q8VEZ7 311 aa16.04■□□□□ 0.16
Trim11-203ENSMUST00000108810 SrcapA0A087WQ44 3271 aa16.04■□□□□ 0.16
Trim11-203ENSMUST00000108810 Mgat1P27808 447 aa16.03■□□□□ 0.16
Trim11-203ENSMUST00000108810 DmpkP54265 631 aa16.03■□□□□ 0.16
Trim11-203ENSMUST00000108810 MlxipQ2VPU4 917 aa16.03■□□□□ 0.16
Trim11-203ENSMUST00000108810 Ice2Q3UZ18 988 aaKnown RBP16.03■□□□□ 0.16
Trim11-203ENSMUST00000108810 Gja3Q64448 417 aa16.03■□□□□ 0.16
Trim11-203ENSMUST00000108810 B3glctQ8BHT6 489 aa16.03■□□□□ 0.16
Trim11-203ENSMUST00000108810 Olfr395Q8VGR3 312 aa16.03■□□□□ 0.16
Trim11-203ENSMUST00000108810 Tlr3Q99MB1 905 aa16.03■□□□□ 0.16
Trim11-203ENSMUST00000108810 Acsl3Q9CZW4 720 aaKnown RBP16.03■□□□□ 0.16
Trim11-203ENSMUST00000108810 Gm7086A0A1W2P766 342 aa16.03■□□□□ 0.16
Trim11-203ENSMUST00000108810 Gm2030D3Z7C4 212 aa16.03■□□□□ 0.16
Trim11-203ENSMUST00000108810 Nap1l1P28656 391 aaKnown RBP16.03■□□□□ 0.16
Trim11-203ENSMUST00000108810 Fam189a2Q4FZH1 290 aa16.03■□□□□ 0.16
Trim11-203ENSMUST00000108810 E2f5Q61502 335 aa16.03■□□□□ 0.16
Trim11-203ENSMUST00000108810 Acot5Q6Q2Z6 421 aa16.03■□□□□ 0.16
Trim11-203ENSMUST00000108810 Tcp10aQ80W76 438 aa16.03■□□□□ 0.16
Trim11-203ENSMUST00000108810 Llgl1Q80Y17 1036 aa16.03■□□□□ 0.16
Trim11-203ENSMUST00000108810 Elac2Q80Y81 831 aaKnown RBP16.03■□□□□ 0.16
Trim11-203ENSMUST00000108810 Fbxo44Q8BK26 255 aa16.03■□□□□ 0.16
Trim11-203ENSMUST00000108810 Elmo3Q8BYZ7 720 aa16.03■□□□□ 0.16
Trim11-203ENSMUST00000108810 AdigQ8R400 80 aa16.03■□□□□ 0.16
Trim11-203ENSMUST00000108810 CalcbQ99MP3 130 aa16.03■□□□□ 0.16
Trim11-203ENSMUST00000108810 Tas1r1Q99PG6 842 aa16.03■□□□□ 0.16
Trim11-203ENSMUST00000108810 Cst12Q9DAN8 128 aa16.03■□□□□ 0.16
Trim11-203ENSMUST00000108810 Pacsin2Q9WVE8 486 aaKnown RBP16.03■□□□□ 0.16
Trim11-203ENSMUST00000108810 Ttc13A0A1L1SSC7 844 aa16.02■□□□□ 0.16
Trim11-203ENSMUST00000108810 Dnajc21E9Q8D0 531 aa16.02■□□□□ 0.16
Trim11-203ENSMUST00000108810 Serpinb2P12388 415 aa16.02■□□□□ 0.16
Trim11-203ENSMUST00000108810 Slc16a10Q3U9N9 512 aa16.02■□□□□ 0.16
Trim11-203ENSMUST00000108810 Arhgap1Q5FWK3 439 aa16.02■□□□□ 0.16
Trim11-203ENSMUST00000108810 FAM120AQ6A0A9 1112 aaKnown RBP16.02■□□□□ 0.16
Trim11-203ENSMUST00000108810 Trnp1Q80ZI1 223 aa16.02■□□□□ 0.16
Trim11-203ENSMUST00000108810 N4bp3Q8C7U1 537 aa16.02■□□□□ 0.16
Trim11-203ENSMUST00000108810 Epn2Q8CHU3 595 aa16.02■□□□□ 0.16
Trim11-203ENSMUST00000108810 PhykplQ8R1K4 467 aa16.02■□□□□ 0.16
Trim11-203ENSMUST00000108810 Olfr1499Q8VG65 314 aa16.02■□□□□ 0.16
Trim11-203ENSMUST00000108810 Mta2Q9R190 668 aa16.02■□□□□ 0.16
Trim11-203ENSMUST00000108810 Twf2Q9Z0P5 349 aaKnown RBP16.02■□□□□ 0.16
Trim11-203ENSMUST00000108810 Arid2E9Q7E2 1828 aa16.02■□□□□ 0.16
Trim11-203ENSMUST00000108810 2210011C24RikA0A087WQ89 206 aa16.02■□□□□ 0.15
Trim11-203ENSMUST00000108810 Plekhg4A0A1L1SU27 1217 aa16.02■□□□□ 0.15
Trim11-203ENSMUST00000108810 Slc35g2D3YVE8 412 aa16.02■□□□□ 0.15
Trim11-203ENSMUST00000108810 Efna5O08543 228 aa16.02■□□□□ 0.15
Trim11-203ENSMUST00000108810 Mucl2P02815 138 aa16.02■□□□□ 0.15
Trim11-203ENSMUST00000108810 Becn2P0DM65 447 aa16.02■□□□□ 0.15
Trim11-203ENSMUST00000108810 Ighmbp2P40694 993 aa16.02■□□□□ 0.15
Trim11-203ENSMUST00000108810 Slc12a2P55012 1205 aa16.02■□□□□ 0.15
Trim11-203ENSMUST00000108810 Nat8lQ3UGX3 299 aa16.02■□□□□ 0.15
Trim11-203ENSMUST00000108810 Cln3Q61124 438 aa16.02■□□□□ 0.15
Trim11-203ENSMUST00000108810 Vipas39Q8BGQ1 491 aa16.02■□□□□ 0.15
Trim11-203ENSMUST00000108810 F13a1Q8BH61 732 aa16.02■□□□□ 0.15
Trim11-203ENSMUST00000108810 Ccser1Q8C0C4 895 aa16.02■□□□□ 0.15
Trim11-203ENSMUST00000108810 Ccdc87Q8CDL9 855 aa16.02■□□□□ 0.15
Trim11-203ENSMUST00000108810 PdgfcQ8CI19 345 aa16.02■□□□□ 0.15
Trim11-203ENSMUST00000108810 Bud13Q8R149 637 aa16.02■□□□□ 0.15
Trim11-203ENSMUST00000108810 Zcchc18Q8VD24 393 aa16.02■□□□□ 0.15
Trim11-203ENSMUST00000108810 Prc1Q99K43 603 aaKnown RBP16.02■□□□□ 0.15
Trim11-203ENSMUST00000108810 Q9D2Q3 444 aa16.02■□□□□ 0.15
Trim11-203ENSMUST00000108810 Rexo2Q9D8S4 237 aa16.02■□□□□ 0.15
Trim11-203ENSMUST00000108810 Smco2Q9DA21 347 aa16.02■□□□□ 0.15
Trim11-203ENSMUST00000108810 Rnf14Q9JI90 485 aa16.02■□□□□ 0.15
Trim11-203ENSMUST00000108810 Wdr72D3YYM4 1114 aa16.01■□□□□ 0.15
Trim11-203ENSMUST00000108810 LipeP54310 759 aa16.01■□□□□ 0.15
Trim11-203ENSMUST00000108810 Dzip3Q7TPV2 1204 aa16.01■□□□□ 0.15
Trim11-203ENSMUST00000108810 Ubap2lQ80X50 1107 aaKnown RBP16.01■□□□□ 0.15
Trim11-203ENSMUST00000108810 Bmp3Q8BHE5 468 aa16.01■□□□□ 0.15
Trim11-203ENSMUST00000108810 Slc45a1Q8BIV7 751 aa16.01■□□□□ 0.15
Trim11-203ENSMUST00000108810 BbxQ8VBW5 907 aa16.01■□□□□ 0.15
Trim11-203ENSMUST00000108810 Pkp2Q9CQ73 795 aaKnown RBP16.01■□□□□ 0.15
Trim11-203ENSMUST00000108810 Rab11fip1Q9D620 645 aa16.01■□□□□ 0.15
Trim11-203ENSMUST00000108810 MesdQ9ERE7 224 aa16.01■□□□□ 0.15
Trim11-203ENSMUST00000108810 Zscan4-ps3A0A1B0GRH6 506 aa16.01■□□□□ 0.15
Trim11-203ENSMUST00000108810 Zscan4-ps2A0A1C7CYU6 506 aa16.01■□□□□ 0.15
Trim11-203ENSMUST00000108810 Gm14525B1AZA0 212 aa16.01■□□□□ 0.15
Trim11-203ENSMUST00000108810 Gm2012B1B0R1 212 aa16.01■□□□□ 0.15
Trim11-203ENSMUST00000108810 Gm8994E9PV04 411 aaKnown RBP16.01■□□□□ 0.15
Trim11-203ENSMUST00000108810 Ctc1Q5SUQ9 1212 aa16.01■□□□□ 0.15
Trim11-203ENSMUST00000108810 LbpQ61805 481 aa16.01■□□□□ 0.15
Trim11-203ENSMUST00000108810 Gm14819Q62478 212 aa16.01■□□□□ 0.15
Trim11-203ENSMUST00000108810 Ccdc57Q6PHN1 1016 aa16.01■□□□□ 0.15
Trim11-203ENSMUST00000108810 Pja2Q80U04 707 aa16.01■□□□□ 0.15
Trim11-203ENSMUST00000108810 Gnl3Q8CI11 538 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 43.8 ms