RNA–Protein interactions for RNA: ENSMUST00000014684.4

U2af1-201, Transcript of Splicing factor U2AF 35 kDa subunit, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene U2af1, Length 907 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1-201ENSMUST00000014684 Rp1P56716 2095 aa18.92■□□□□ 0.62
U2af1-201ENSMUST00000014684 BptfA2A654 3036 aaKnown RBP18.92■□□□□ 0.62
U2af1-201ENSMUST00000014684 Plin4O88492 1403 aa18.91■□□□□ 0.62
U2af1-201ENSMUST00000014684 Grik3B1AS29 919 aa18.91■□□□□ 0.62
U2af1-201ENSMUST00000014684 Ugt1a8D3Z748 530 aa18.91■□□□□ 0.62
U2af1-201ENSMUST00000014684 Dpep1P31428 410 aa18.91■□□□□ 0.62
U2af1-201ENSMUST00000014684 Ppp3ccP48455 513 aa18.91■□□□□ 0.62
U2af1-201ENSMUST00000014684 Defb28Q3V2L0 89 aa18.91■□□□□ 0.62
U2af1-201ENSMUST00000014684 ManeaQ6NXH2 462 aa18.91■□□□□ 0.62
U2af1-201ENSMUST00000014684 Gm21985Q6P6P5 1106 aa18.91■□□□□ 0.62
U2af1-201ENSMUST00000014684 Suz12Q80U70 741 aaKnown RBP18.91■□□□□ 0.62
U2af1-201ENSMUST00000014684 Pwp2Q8BU03 919 aaKnown RBP18.91■□□□□ 0.62
U2af1-201ENSMUST00000014684 Frat2Q8K025 231 aa18.91■□□□□ 0.62
U2af1-201ENSMUST00000014684 Olfr345Q8VGK4 311 aa18.91■□□□□ 0.62
U2af1-201ENSMUST00000014684 Pcdhb12Q91Y07 789 aa18.91■□□□□ 0.62
U2af1-201ENSMUST00000014684 HgsQ99LI8 775 aa18.91■□□□□ 0.62
U2af1-201ENSMUST00000014684 Gm7356A0A087WSA6 508 aa18.9■□□□□ 0.62
U2af1-201ENSMUST00000014684 Dll3O88516 592 aa18.9■□□□□ 0.62
U2af1-201ENSMUST00000014684 Klf1P46099 358 aa18.9■□□□□ 0.62
U2af1-201ENSMUST00000014684 Rnf20Q5DTM8 973 aa18.9■□□□□ 0.62
U2af1-201ENSMUST00000014684 Tnni3kQ5GIG6 834 aa18.9■□□□□ 0.62
U2af1-201ENSMUST00000014684 Rnf43Q5NCP0 784 aa18.9■□□□□ 0.62
U2af1-201ENSMUST00000014684 Trav8d-2Q5R1B6 112 aa18.9■□□□□ 0.62
U2af1-201ENSMUST00000014684 Mkrn3Q60764 544 aa18.9■□□□□ 0.62
U2af1-201ENSMUST00000014684 Kif5bQ61768 963 aa18.9■□□□□ 0.62
U2af1-201ENSMUST00000014684 PdgfrlQ6PE55 375 aa18.9■□□□□ 0.62
U2af1-201ENSMUST00000014684 Ppme1Q8BVQ5 386 aa18.9■□□□□ 0.62
U2af1-201ENSMUST00000014684 NemfQ8CCP0 1064 aaKnown RBP18.9■□□□□ 0.62
U2af1-201ENSMUST00000014684 Gpc3Q8CFZ4 579 aa18.9■□□□□ 0.62
U2af1-201ENSMUST00000014684 Rtn1Q8K0T0 780 aa18.9■□□□□ 0.62
U2af1-201ENSMUST00000014684 Upb1Q8VC97 393 aa18.9■□□□□ 0.62
U2af1-201ENSMUST00000014684 TraipQ8VIG6 470 aa18.9■□□□□ 0.62
U2af1-201ENSMUST00000014684 Pip4k2cQ91XU3 421 aa18.9■□□□□ 0.62
U2af1-201ENSMUST00000014684 Ccnt1Q9QWV9 724 aaKnown RBP18.9■□□□□ 0.62
U2af1-201ENSMUST00000014684 Trp53inp1Q9QXE4 239 aa18.9■□□□□ 0.62
U2af1-201ENSMUST00000014684 Nxpe3B9EKK6 559 aa18.89■□□□□ 0.61
U2af1-201ENSMUST00000014684 Cd70O55237 195 aa18.89■□□□□ 0.61
U2af1-201ENSMUST00000014684 P01878 344 aa18.89■□□□□ 0.61
U2af1-201ENSMUST00000014684 Mars2Q499X9 586 aaKnown RBP18.89■□□□□ 0.61
U2af1-201ENSMUST00000014684 Nlrp2Q4PLS0 1046 aaKnown RBP18.89■□□□□ 0.61
U2af1-201ENSMUST00000014684 Dnaaf2Q8BPI1 814 aa18.89■□□□□ 0.61
U2af1-201ENSMUST00000014684 Rps6kl1Q8R2S1 544 aa18.89■□□□□ 0.61
U2af1-201ENSMUST00000014684 Pla2g12aQ9EPR2 192 aa18.89■□□□□ 0.61
U2af1-201ENSMUST00000014684 CenpkQ9ESN5 271 aa18.89■□□□□ 0.61
U2af1-201ENSMUST00000014684 Igkv16-104A0A0B4J1I1 116 aa18.88■□□□□ 0.61
U2af1-201ENSMUST00000014684 Ralgps1A2AR50 585 aa18.88■□□□□ 0.61
U2af1-201ENSMUST00000014684 Plcb2A3KGF7 1181 aa18.88■□□□□ 0.61
U2af1-201ENSMUST00000014684 Gm10718D3Z1I7 227 aa18.88■□□□□ 0.61
U2af1-201ENSMUST00000014684 ChadO55226 358 aa18.88■□□□□ 0.61
U2af1-201ENSMUST00000014684 JchainP01592 159 aa18.88■□□□□ 0.61
U2af1-201ENSMUST00000014684 LifP09056 203 aa18.88■□□□□ 0.61
U2af1-201ENSMUST00000014684 Aimp1P31230 310 aaKnown RBP18.88■□□□□ 0.61
U2af1-201ENSMUST00000014684 InhbcP55104 352 aa18.88■□□□□ 0.61
U2af1-201ENSMUST00000014684 Casp7P97864 303 aa18.88■□□□□ 0.61
U2af1-201ENSMUST00000014684 Tgoln2Q62314 363 aa18.88■□□□□ 0.61
U2af1-201ENSMUST00000014684 Foxl1Q64731 336 aa18.88■□□□□ 0.61
U2af1-201ENSMUST00000014684 Vsx1Q91V10 363 aa18.88■□□□□ 0.61
U2af1-201ENSMUST00000014684 Ndufs2Q91WD5 463 aa18.88■□□□□ 0.61
U2af1-201ENSMUST00000014684 Slc22a17Q9D9E0 401 aa18.88■□□□□ 0.61
U2af1-201ENSMUST00000014684 Arpp21Q9DCB4 807 aa18.88■□□□□ 0.61
U2af1-201ENSMUST00000014684 Atp13a1Q9EPE9 1200 aaKnown RBP18.88■□□□□ 0.61
U2af1-201ENSMUST00000014684 Foxm1O08696 760 aa18.87■□□□□ 0.61
U2af1-201ENSMUST00000014684 Wipf3P0C7L0 485 aa18.87■□□□□ 0.61
U2af1-201ENSMUST00000014684 Hoxb4P10284 250 aa18.87■□□□□ 0.61
U2af1-201ENSMUST00000014684 Limk1P53668 647 aa18.87■□□□□ 0.61
U2af1-201ENSMUST00000014684 Tfdp1Q08639 410 aa18.87■□□□□ 0.61
U2af1-201ENSMUST00000014684 RubcnlQ3TD16 648 aa18.87■□□□□ 0.61
U2af1-201ENSMUST00000014684 Mrgprx1Q8CIP3 322 aa18.87■□□□□ 0.61
U2af1-201ENSMUST00000014684 Pms1Q8K119 917 aa18.87■□□□□ 0.61
U2af1-201ENSMUST00000014684 Scara5Q8K299 491 aa18.87■□□□□ 0.61
U2af1-201ENSMUST00000014684 Phospho2Q9D9M5 241 aa18.87■□□□□ 0.61
U2af1-201ENSMUST00000014684 Smg9Q9DB90 520 aa18.87■□□□□ 0.61
U2af1-201ENSMUST00000014684 FastkQ9JIX9 511 aa18.87■□□□□ 0.61
U2af1-201ENSMUST00000014684 Cntn6Q9JMB8 1028 aa18.87■□□□□ 0.61
U2af1-201ENSMUST00000014684 Dopey2Q3UHQ6 2295 aa18.86■□□□□ 0.61
U2af1-201ENSMUST00000014684 Vmn2r121A2BE32 847 aa18.86■□□□□ 0.61
U2af1-201ENSMUST00000014684 4930444G20RikD3Z741 495 aa18.86■□□□□ 0.61
U2af1-201ENSMUST00000014684 Brd1E9PZ26 1189 aaKnown RBP18.86■□□□□ 0.61
U2af1-201ENSMUST00000014684 BC051665E9Q623 330 aa18.86■□□□□ 0.61
U2af1-201ENSMUST00000014684 Gm4841E9QAA8 417 aa18.86■□□□□ 0.61
U2af1-201ENSMUST00000014684 H2-T24F8VQG4 363 aa18.86■□□□□ 0.61
U2af1-201ENSMUST00000014684 Pias3O54714 628 aa18.86■□□□□ 0.61
U2af1-201ENSMUST00000014684 DtnbO70585 659 aa18.86■□□□□ 0.61
U2af1-201ENSMUST00000014684 Prss48Q14B25 312 aa18.86■□□□□ 0.61
U2af1-201ENSMUST00000014684 Grm2Q14BI2 872 aa18.86■□□□□ 0.61
U2af1-201ENSMUST00000014684 Aldh1a2Q62148 518 aa18.86■□□□□ 0.61
U2af1-201ENSMUST00000014684 Trak2Q6P9N8 913 aa18.86■□□□□ 0.61
U2af1-201ENSMUST00000014684 Pnma2Q8BHK0 365 aa18.86■□□□□ 0.61
U2af1-201ENSMUST00000014684 Bola3Q8CEI1 110 aa18.86■□□□□ 0.61
U2af1-201ENSMUST00000014684 Csde1Q91W50 798 aaKnown RBP18.86■□□□□ 0.61
U2af1-201ENSMUST00000014684 Pcdhga6Q91XY2 932 aa18.86■□□□□ 0.61
U2af1-201ENSMUST00000014684 Noc2lQ9WV70 747 aaKnown RBP18.86■□□□□ 0.61
U2af1-201ENSMUST00000014684 Cfap54Q8C6S9 3106 aa18.85■□□□□ 0.61
U2af1-201ENSMUST00000014684 Zscan20B2KFW1 1030 aa18.85■□□□□ 0.61
U2af1-201ENSMUST00000014684 Vmn2r23E9PXI5 849 aa18.85■□□□□ 0.61
U2af1-201ENSMUST00000014684 Kmt5bQ3U8K7 883 aa18.85■□□□□ 0.61
U2af1-201ENSMUST00000014684 Dph1Q5NCQ5 438 aa18.85■□□□□ 0.61
U2af1-201ENSMUST00000014684 Cntn2Q61330 1040 aa18.85■□□□□ 0.61
U2af1-201ENSMUST00000014684 Mpp4Q6P7F1 635 aa18.85■□□□□ 0.61
U2af1-201ENSMUST00000014684 Sox11Q7M6Y2 395 aa18.85■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms