RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C VEL1P53058 206 aa2.44□□□□□ -2.02
RPC40YPR110C YGL185CP53100 379 aa2.44□□□□□ -2.02
RPC40YPR110C MND1P53102 219 aa2.44□□□□□ -2.02
RPC40YPR110C RPN14P53196 417 aa2.44□□□□□ -2.02
RPC40YPR110C SWC4P53201 476 aa2.44□□□□□ -2.02
RPC40YPR110C API2Q04413 109 aa2.44□□□□□ -2.02
RPC40YPR110C MIM1Q08176 113 aa2.44□□□□□ -2.02
RPC40YPR110C YPQ1Q12010 308 aa2.44□□□□□ -2.02
RPC40YPR110C RAX2Q12465 1220 aa2.44□□□□□ -2.02
RPC40YPR110C MRPL23Q12487 163 aaPredicted RBP2.44□□□□□ -2.02
RPC40YPR110C TY4B-HP0C2J7 1802 aa2.44□□□□□ -2.02
RPC40YPR110C TY4B-JP47024 1803 aa2.44□□□□□ -2.02
RPC40YPR110C RAD7P06779 565 aa2.43□□□□□ -2.02
RPC40YPR110C SSA3P09435 649 aaKnown RBP2.43□□□□□ -2.02
RPC40YPR110C FRS2P15625 503 aaKnown RBP2.43□□□□□ -2.02
RPC40YPR110C ERD1P16151 362 aa2.43□□□□□ -2.02
RPC40YPR110C YMR262WP38430 313 aa2.43□□□□□ -2.02
RPC40YPR110C HIS2P38635 335 aa2.43□□□□□ -2.02
RPC40YPR110C CTM1P38818 585 aa2.43□□□□□ -2.02
RPC40YPR110C GDS1P41913 522 aa2.43□□□□□ -2.02
RPC40YPR110C AGP3P43548 558 aa2.43□□□□□ -2.02
RPC40YPR110C MIC19P43594 170 aa2.43□□□□□ -2.02
RPC40YPR110C YGR067CP53243 804 aa2.43□□□□□ -2.02
RPC40YPR110C YGR266WP53326 701 aa2.43□□□□□ -2.02
RPC40YPR110C YNR066CP53752 436 aa2.43□□□□□ -2.02
RPC40YPR110C INP2Q03824 705 aa2.43□□□□□ -2.02
RPC40YPR110C BER1Q06688 274 aaKnown RBP2.43□□□□□ -2.02
RPC40YPR110C FMP16Q12497 93 aa2.43□□□□□ -2.02
RPC40YPR110C YBL111CQ3E7Y5 667 aa2.43□□□□□ -2.02
RPC40YPR110C BI3Q9ZZW7 517 aa2.43□□□□□ -2.02
RPC40YPR110C TDH3P00359 332 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
RPC40YPR110C IFM1P25038 676 aa2.42□□□□□ -2.02
RPC40YPR110C CYM1P32898 989 aa2.42□□□□□ -2.02
RPC40YPR110C IMP3P32899 183 aaPredicted RBP2.42□□□□□ -2.02
RPC40YPR110C RIB7P33312 244 aa2.42□□□□□ -2.02
RPC40YPR110C RPC37P36121 282 aa2.42□□□□□ -2.02
RPC40YPR110C RFT1P38206 574 aaPredicted RBP2.42□□□□□ -2.02
RPC40YPR110C PET100P38958 111 aa2.42□□□□□ -2.02
RPC40YPR110C KEL2P50090 882 aa2.42□□□□□ -2.02
RPC40YPR110C VTI1Q04338 217 aa2.42□□□□□ -2.02
RPC40YPR110C DIB1Q06819 143 aaPredicted RBP2.42□□□□□ -2.02
RPC40YPR110C TIR4Q12218 487 aaPredicted RBP2.42□□□□□ -2.02
RPC40YPR110C YAL067W-AQ8TGK6 75 aa2.42□□□□□ -2.02
RPC40YPR110C YRF1-2P40105 1681 aa2.41□□□□□ -2.02
RPC40YPR110C MRPL20P22354 195 aaPredicted RBP2.41□□□□□ -2.02
RPC40YPR110C CSM1P25651 190 aa2.41□□□□□ -2.02
RPC40YPR110C RPL16BP26785 198 aaKnown RBP2.41□□□□□ -2.02
RPC40YPR110C INO2P26798 304 aa2.41□□□□□ -2.02
RPC40YPR110C YKL063CP35725 167 aa2.41□□□□□ -2.02
RPC40YPR110C DBP7P36120 742 aaKnown RBP2.41□□□□□ -2.02
RPC40YPR110C YPC1P38298 316 aa2.41□□□□□ -2.02
RPC40YPR110C SHQ1P40486 507 aaPredicted RBP2.41□□□□□ -2.02
RPC40YPR110C UFE1P41834 346 aa2.41□□□□□ -2.02
RPC40YPR110C YFL012WP43580 148 aa2.41□□□□□ -2.02
RPC40YPR110C FMP33P46998 180 aa2.41□□□□□ -2.02
RPC40YPR110C YPT32P51996 222 aaKnown RBP2.41□□□□□ -2.02
RPC40YPR110C ECM11Q04110 302 aa2.41□□□□□ -2.02
RPC40YPR110C GPN3Q06543 272 aa2.41□□□□□ -2.02
RPC40YPR110C YOL029CQ08187 201 aa2.41□□□□□ -2.02
RPC40YPR110C TRM10Q12400 293 aa2.41□□□□□ -2.02
RPC40YPR110C DFM1Q12743 341 aaKnown RBP2.41□□□□□ -2.02
RPC40YPR110C RRP5Q05022 1729 aaKnown RBP2.41□□□□□ -2.02
RPC40YPR110C RPS19AP07280 144 aaKnown RBP2.4□□□□□ -2.03
RPC40YPR110C RPS19BP07281 144 aaPredicted RBP2.4□□□□□ -2.03
RPC40YPR110C VPH2P32341 215 aa2.4□□□□□ -2.03
RPC40YPR110C VAB2P40003 282 aa2.4□□□□□ -2.03
RPC40YPR110C HIT1P46973 164 aa2.4□□□□□ -2.03
RPC40YPR110C COQ5P49017 307 aa2.4□□□□□ -2.03
RPC40YPR110C FMP48P53233 369 aa2.4□□□□□ -2.03
RPC40YPR110C YNL050CP53952 270 aa2.4□□□□□ -2.03
RPC40YPR110C INP1Q03694 420 aa2.4□□□□□ -2.03
RPC40YPR110C GMC1Q04399 608 aa2.4□□□□□ -2.03
RPC40YPR110C ECM19Q06011 112 aa2.4□□□□□ -2.03
RPC40YPR110C ASR1Q06834 288 aa2.4□□□□□ -2.03
RPC40YPR110C YOR292CQ08743 309 aa2.4□□□□□ -2.03
RPC40YPR110C VIK1Q12045 647 aa2.4□□□□□ -2.03
RPC40YPR110C ERP3Q12403 225 aa2.4□□□□□ -2.03
RPC40YPR110C PRP46Q12417 451 aaPredicted RBP2.4□□□□□ -2.03
RPC40YPR110C YPR064WQ12492 139 aa2.4□□□□□ -2.03
RPC40YPR110C LAG2Q92325 660 aa2.4□□□□□ -2.03
RPC40YPR110C YIL177CP40434 1758 aa2.4□□□□□ -2.03
RPC40YPR110C YJL225CP40889 1758 aa2.4□□□□□ -2.03
RPC40YPR110C FKS3Q04952 1785 aa2.39□□□□□ -2.03
RPC40YPR110C COX10P21592 462 aa2.39□□□□□ -2.03
RPC40YPR110C AEP1P32493 518 aa2.39□□□□□ -2.03
RPC40YPR110C GCG1P32656 232 aaKnown RBP2.39□□□□□ -2.03
RPC40YPR110C ZRT3P34240 503 aa2.39□□□□□ -2.03
RPC40YPR110C GPX1P36014 167 aa2.39□□□□□ -2.03
RPC40YPR110C TPO5P36029 618 aa2.39□□□□□ -2.03
RPC40YPR110C FRM2P37261 193 aa2.39□□□□□ -2.03
RPC40YPR110C FLC3P53121 802 aa2.39□□□□□ -2.03
RPC40YPR110C LSB1P53281 241 aa2.39□□□□□ -2.03
RPC40YPR110C UTP15Q04305 513 aaKnown RBP2.39□□□□□ -2.03
RPC40YPR110C SEC13Q04491 297 aaKnown RBP2.39□□□□□ -2.03
RPC40YPR110C RRP42Q12277 265 aaPredicted RBP2.39□□□□□ -2.03
RPC40YPR110C AUS1Q08409 1394 aa2.38□□□□□ -2.03
RPC40YPR110C TDH1P00360 332 aaKnown RBP2.38□□□□□ -2.03
RPC40YPR110C TFS1P14306 219 aa2.38□□□□□ -2.03
RPC40YPR110C FUS3P16892 353 aaKnown RBP2.38□□□□□ -2.03
RPC40YPR110C CKA2P19454 339 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms