RNA–Protein interactions for RNA: YPL253C

VIK1, Transcript of Protein that forms a kinesin-14 heterodimeric motor with Kar3p, yeast

Gene VIK1, Length 1,944 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VIK1	YPL253C	YDR089W	P38966	869 aa		0.42	□□□□□ -2.34
VIK1	YPL253C	ALP1	P38971	573 aa		0.42	□□□□□ -2.34
VIK1	YPL253C	SWT21	P53873	357 aa	Predicted RBP	0.42	□□□□□ -2.34
VIK1	YPL253C	EOS1	P53938	366 aa		0.42	□□□□□ -2.34
VIK1	YPL253C	RCF1	Q03713	159 aa		0.42	□□□□□ -2.34
VIK1	YPL253C	SNX41	Q04053	625 aa		0.42	□□□□□ -2.34
VIK1	YPL253C	YLL007C	Q07799	665 aa		0.42	□□□□□ -2.34
VIK1	YPL253C	SPO24	Q3E752	67 aa		0.42	□□□□□ -2.34
VIK1	YPL253C	RPL18A	P0CX49	186 aa	Known RBP	0.42	□□□□□ -2.34
VIK1	YPL253C	RPL18B	P0CX50	186 aa	Known RBP	0.42	□□□□□ -2.34
VIK1	YPL253C	TAL1	P15019	335 aa	Known RBP	0.42	□□□□□ -2.34
VIK1	YPL253C	OSM1	P21375	501 aa	Known RBP	0.42	□□□□□ -2.34
VIK1	YPL253C	VMA5	P31412	392 aa	Known RBP	0.42	□□□□□ -2.34
VIK1	YPL253C	SMI1	P32566	505 aa		0.42	□□□□□ -2.34
VIK1	YPL253C	PRP39	P39682	629 aa	Known RBP	0.42	□□□□□ -2.34
VIK1	YPL253C	VAB2	P40003	282 aa		0.42	□□□□□ -2.34
VIK1	YPL253C	KRE29	P40026	464 aa		0.42	□□□□□ -2.34
VIK1	YPL253C	RPA34	P47006	233 aa	Predicted RBP	0.42	□□□□□ -2.34
VIK1	YPL253C	YGR016W	P53209	190 aa		0.42	□□□□□ -2.34
VIK1	YPL253C	ABZ2	Q03266	374 aa		0.42	□□□□□ -2.34
VIK1	YPL253C	YMR111C	Q04461	462 aa	Predicted RBP	0.42	□□□□□ -2.34
VIK1	YPL253C	STE23	Q06010	1027 aa		0.42	□□□□□ -2.34
VIK1	YPL253C	PGC1	Q08959	321 aa		0.42	□□□□□ -2.34
VIK1	YPL253C	NUP157	P40064	1391 aa	Known RBP	0.41	□□□□□ -2.34
VIK1	YPL253C	YBR056W-A	I2HB52	66 aa		0.41	□□□□□ -2.34
VIK1	YPL253C	RPL16B	P26785	198 aa	Known RBP	0.41	□□□□□ -2.34
VIK1	YPL253C	DOA4	P32571	926 aa		0.41	□□□□□ -2.34
VIK1	YPL253C	TPO5	P36029	618 aa		0.41	□□□□□ -2.34
VIK1	YPL253C	MCH2	P36032	473 aa		0.41	□□□□□ -2.34
VIK1	YPL253C	LIN1	P38852	340 aa	Predicted RBP	0.41	□□□□□ -2.34
VIK1	YPL253C	YER135C	P40082	130 aa		0.41	□□□□□ -2.34
VIK1	YPL253C	AIM20	P40451	204 aa		0.41	□□□□□ -2.34
VIK1	YPL253C	MRS2	Q01926	470 aa		0.41	□□□□□ -2.34
VIK1	YPL253C	RVB1	Q03940	463 aa	Known RBP	0.41	□□□□□ -2.34
VIK1	YPL253C	ISD11	Q6Q560	94 aa		0.41	□□□□□ -2.34
VIK1	YPL253C	CDC7	P06243	507 aa		0.4	□□□□□ -2.34
VIK1	YPL253C	GAL3	P13045	520 aa		0.4	□□□□□ -2.34
VIK1	YPL253C	OPI1	P21957	404 aa		0.4	□□□□□ -2.34
VIK1	YPL253C	BLI1	P35727	113 aa		0.4	□□□□□ -2.34
VIK1	YPL253C	YKL162C	P36052	402 aa		0.4	□□□□□ -2.34
VIK1	YPL253C	UIP5	P36137	443 aa		0.4	□□□□□ -2.34
VIK1	YPL253C	NUP57	P48837	541 aa		0.4	□□□□□ -2.34
VIK1	YPL253C	YGL114W	P53134	725 aa		0.4	□□□□□ -2.34
VIK1	YPL253C	PDR16	P53860	351 aa	Known RBP	0.4	□□□□□ -2.34
VIK1	YPL253C	PRO2	P54885	456 aa	Known RBP	0.4	□□□□□ -2.34
VIK1	YPL253C	IRC4	Q03036	179 aa		0.4	□□□□□ -2.34
VIK1	YPL253C	YDR262W	Q12331	272 aa		0.4	□□□□□ -2.34
VIK1	YPL253C	UTP23	Q12339	254 aa	Known RBP	0.4	□□□□□ -2.34
VIK1	YPL253C	PAA1	Q12447	191 aa	Known RBP	0.4	□□□□□ -2.34
VIK1	YPL253C	NOT5	Q12514	560 aa	Predicted RBP	0.4	□□□□□ -2.34
VIK1	YPL253C	TPM1	P17536	199 aa	Known RBP	0.4	□□□□□ -2.35
VIK1	YPL253C	TRX1	P22217	103 aa	Known RBP	0.4	□□□□□ -2.35
VIK1	YPL253C	FET3	P38993	636 aa		0.4	□□□□□ -2.35
VIK1	YPL253C	CAJ1	P39101	391 aa		0.4	□□□□□ -2.35
VIK1	YPL253C	OSW5	P40219	148 aa		0.4	□□□□□ -2.35
VIK1	YPL253C	YJL118W	P47022	219 aa		0.4	□□□□□ -2.35
VIK1	YPL253C	COG7	P53195	279 aa		0.4	□□□□□ -2.35
VIK1	YPL253C	YGR168C	P53293	376 aa		0.4	□□□□□ -2.35
VIK1	YPL253C	YNL146W	P53906	100 aa		0.4	□□□□□ -2.35
VIK1	YPL253C	BUR2	Q05949	395 aa		0.4	□□□□□ -2.35
VIK1	YPL253C	CUR1	Q06469	252 aa		0.4	□□□□□ -2.35
VIK1	YPL253C	REX3	Q12090	404 aa		0.4	□□□□□ -2.35
VIK1	YPL253C	YBL112C	Q3E7Y4	105 aa		0.4	□□□□□ -2.35
VIK1	YPL253C	NBL1	Q3E7Y6	73 aa		0.4	□□□□□ -2.35
VIK1	YPL253C	YOL162W	P0CF19	215 aa		0.39	□□□□□ -2.35
VIK1	YPL253C	YPC1	P38298	316 aa		0.39	□□□□□ -2.35
VIK1	YPL253C	SWC5	P38326	303 aa		0.39	□□□□□ -2.35
VIK1	YPL253C	YHR035W	P38769	630 aa		0.39	□□□□□ -2.35
VIK1	YPL253C	DSE2	P38844	325 aa		0.39	□□□□□ -2.35
VIK1	YPL253C	TIF34	P40217	347 aa	Known RBP	0.39	□□□□□ -2.35
VIK1	YPL253C	RPL10	P41805	221 aa	Known RBP	0.39	□□□□□ -2.35
VIK1	YPL253C	RIB4	P50861	169 aa	Predicted RBP	0.39	□□□□□ -2.35
VIK1	YPL253C	DBP6	P53734	629 aa	Known RBP	0.39	□□□□□ -2.35
VIK1	YPL253C	CAB5	Q03941	241 aa		0.39	□□□□□ -2.35
VIK1	YPL253C	VPS20	Q04272	221 aa		0.39	□□□□□ -2.35
VIK1	YPL253C	TAZ1	Q06510	381 aa		0.39	□□□□□ -2.35
VIK1	YPL253C	PBP4	Q07362	185 aa	Known RBP	0.39	□□□□□ -2.35
VIK1	YPL253C	YOL019W	Q08157	551 aa		0.39	□□□□□ -2.35
VIK1	YPL253C	YEL009C-A	A0A023PZF2	135 aa		0.38	□□□□□ -2.35
VIK1	YPL253C	CAR2	P07991	424 aa	Known RBP	0.38	□□□□□ -2.35
VIK1	YPL253C	SGA1	P08019	549 aa		0.38	□□□□□ -2.35
VIK1	YPL253C	RNR2	P09938	399 aa	Known RBP	0.38	□□□□□ -2.35
VIK1	YPL253C	ZRT1	P32804	376 aa		0.38	□□□□□ -2.35
VIK1	YPL253C	IMP3	P32899	183 aa	Predicted RBP	0.38	□□□□□ -2.35
VIK1	YPL253C	END3	P39013	349 aa		0.38	□□□□□ -2.35
VIK1	YPL253C	AVT7	P40501	490 aa		0.38	□□□□□ -2.35
VIK1	YPL253C	RPE1	P46969	238 aa		0.38	□□□□□ -2.35
VIK1	YPL253C	GON7	P46984	123 aa		0.38	□□□□□ -2.35
VIK1	YPL253C	CDC14	Q00684	551 aa		0.38	□□□□□ -2.35
VIK1	YPL253C	YMR114C	Q04471	368 aa	Known RBP	0.38	□□□□□ -2.35
VIK1	YPL253C	LOA1	Q06508	300 aa		0.38	□□□□□ -2.35
VIK1	YPL253C	SPT7	P35177	1332 aa		0.38	□□□□□ -2.35
VIK1	YPL253C	CDC37	P06101	506 aa	Known RBP	0.38	□□□□□ -2.35
VIK1	YPL253C	RAD7	P06779	565 aa		0.38	□□□□□ -2.35
VIK1	YPL253C	RPL31A	P0C2H8	113 aa	Known RBP	0.38	□□□□□ -2.35
VIK1	YPL253C	VMA2	P16140	517 aa	Known RBP	0.38	□□□□□ -2.35
VIK1	YPL253C	KRR1	P25586	316 aa	Predicted RBP	0.38	□□□□□ -2.35
VIK1	YPL253C	KRE6	P32486	720 aa		0.38	□□□□□ -2.35
VIK1	YPL253C	SCM4	P32564	187 aa		0.38	□□□□□ -2.35
VIK1	YPL253C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	0.38	□□□□□ -2.35	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms