RNA–Protein interactions for RNA: YPL008W

CHL1, Transcript of Probable DNA helicase, yeast

Gene CHL1, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL1	YPL008W	MET2	P08465	486 aa		3.67	□□□□□ -1.82
CHL1	YPL008W	GCD1	P09032	578 aa	Predicted RBP	3.67	□□□□□ -1.82
CHL1	YPL008W	MRP1	P10662	321 aa	Known RBP	3.67	□□□□□ -1.82
CHL1	YPL008W	JEN1	P36035	616 aa		3.67	□□□□□ -1.82
CHL1	YPL008W	DTR1	P38125	572 aa		3.67	□□□□□ -1.82
CHL1	YPL008W	THI2	P38141	450 aa		3.67	□□□□□ -1.82
CHL1	YPL008W	VBA2	P38358	474 aa	Known RBP	3.67	□□□□□ -1.82
CHL1	YPL008W	PFS1	P38872	237 aa		3.67	□□□□□ -1.82
CHL1	YPL008W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.67	□□□□□ -1.82	not detected
CHL1	YPL008W	VRG4	P40107	337 aa		3.67	□□□□□ -1.82
CHL1	YPL008W	FET5	P43561	622 aa		3.67	□□□□□ -1.82
CHL1	YPL008W	ALB1	P47019	175 aa	Predicted RBP	3.67	□□□□□ -1.82
CHL1	YPL008W	PMT5	P52867	743 aa		3.67	□□□□□ -1.82
CHL1	YPL008W	GIM3	P53900	129 aa		3.67	□□□□□ -1.82
CHL1	YPL008W	ERG13	P54839	491 aa	Known RBP	3.67	□□□□□ -1.82
CHL1	YPL008W	SSK1	Q07084	712 aa		3.67	□□□□□ -1.82
CHL1	YPL008W	CRT10	Q08226	957 aa		3.67	□□□□□ -1.82
CHL1	YPL008W	RRG7	Q08774	242 aa	Predicted RBP	3.67	□□□□□ -1.82
CHL1	YPL008W	BAG7	Q12128	409 aa		3.67	□□□□□ -1.82
CHL1	YPL008W	SPC3	Q12133	184 aa		3.67	□□□□□ -1.82
CHL1	YPL008W	YDR061W	Q12298	539 aa		3.67	□□□□□ -1.82
CHL1	YPL008W	PEP4	P07267	405 aa	Known RBP	3.66	□□□□□ -1.82
CHL1	YPL008W	PET54	P10834	293 aa		3.66	□□□□□ -1.82
CHL1	YPL008W	FUN26	P31381	517 aa		3.66	□□□□□ -1.82
CHL1	YPL008W	TMA19	P35691	167 aa	Known RBP	3.66	□□□□□ -1.82
CHL1	YPL008W	SER3	P40054	469 aa		3.66	□□□□□ -1.82
CHL1	YPL008W	TIF34	P40217	347 aa	Known RBP	3.66	□□□□□ -1.82
CHL1	YPL008W	CIN1	P40987	1014 aa		3.66	□□□□□ -1.82
CHL1	YPL008W	MNN5	P46982	586 aa		3.66	□□□□□ -1.82
CHL1	YPL008W	CDH1	P53197	566 aa		3.66	□□□□□ -1.82
CHL1	YPL008W	DML1	Q03652	475 aa		3.66	□□□□□ -1.82
CHL1	YPL008W	YFT2	Q06676	274 aa		3.66	□□□□□ -1.82
CHL1	YPL008W	YOR283W	Q12040	230 aa	Known RBP	3.66	□□□□□ -1.82
CHL1	YPL008W	MTR10	Q99189	972 aa		3.66	□□□□□ -1.82
CHL1	YPL008W	SPS2	P08459	502 aa		3.66	□□□□□ -1.82
CHL1	YPL008W	SAR1	P20606	190 aa	Known RBP	3.66	□□□□□ -1.82
CHL1	YPL008W	NUP1	P20676	1076 aa		3.66	□□□□□ -1.82
CHL1	YPL008W	ATG22	P25568	528 aa		3.66	□□□□□ -1.82
CHL1	YPL008W	MSN4	P33749	630 aa		3.66	□□□□□ -1.82
CHL1	YPL008W	YKL071W	P36086	256 aa		3.66	□□□□□ -1.82
CHL1	YPL008W	PAU24	P38155	120 aa		3.66	□□□□□ -1.82
CHL1	YPL008W	YBR137W	P38276	179 aa		3.66	□□□□□ -1.82
CHL1	YPL008W	PET100	P38958	111 aa		3.66	□□□□□ -1.82
CHL1	YPL008W	MIT1	P40002	666 aa		3.66	□□□□□ -1.82
CHL1	YPL008W	SMB1	P40018	196 aa	Known RBP	3.66	□□□□□ -1.82
CHL1	YPL008W	YKE4	P40544	346 aa		3.66	□□□□□ -1.82
CHL1	YPL008W	TEX1	P53851	422 aa	Known RBP	3.66	□□□□□ -1.82
CHL1	YPL008W	PGA1	P53896	198 aa		3.66	□□□□□ -1.82
CHL1	YPL008W	TPO3	Q06451	622 aa		3.66	□□□□□ -1.82
CHL1	YPL008W	FUN19	P28003	413 aa	Predicted RBP	3.65	□□□□□ -1.82
CHL1	YPL008W	DCG1	P32460	244 aa		3.65	□□□□□ -1.82
CHL1	YPL008W	PAU2	P32612	120 aa		3.65	□□□□□ -1.82
CHL1	YPL008W	TRS65	P32893	560 aa		3.65	□□□□□ -1.82
CHL1	YPL008W	ANR2	P36090	516 aa	Predicted RBP	3.65	□□□□□ -1.82
CHL1	YPL008W	UTP30	P36144	274 aa	Known RBP	3.65	□□□□□ -1.82
CHL1	YPL008W	MRPL15	P36523	253 aa		3.65	□□□□□ -1.82
CHL1	YPL008W	VMA22	P38784	181 aa		3.65	□□□□□ -1.82
CHL1	YPL008W	PMT6	P42934	759 aa		3.65	□□□□□ -1.82
CHL1	YPL008W	IBA57	P47158	497 aa		3.65	□□□□□ -1.82
CHL1	YPL008W	LCL3	P53153	274 aa		3.65	□□□□□ -1.82
CHL1	YPL008W	ERV29	P53337	310 aa		3.65	□□□□□ -1.82
CHL1	YPL008W	YLR283W	Q05867	314 aa		3.65	□□□□□ -1.82
CHL1	YPL008W	MRPL51	Q06090	140 aa	Predicted RBP	3.65	□□□□□ -1.82
CHL1	YPL008W	HNT3	Q08702	217 aa		3.65	□□□□□ -1.82
CHL1	YPL008W	FMP40	Q08968	688 aa	Predicted RBP	3.65	□□□□□ -1.82
CHL1	YPL008W	YDL177C	Q12257	170 aa		3.65	□□□□□ -1.82
CHL1	YPL008W	RTR2	Q12378	196 aa		3.65	□□□□□ -1.82
CHL1	YPL008W	SET6	Q12529	373 aa		3.65	□□□□□ -1.82
CHL1	YPL008W	GAL4	P04386	881 aa		3.65	□□□□□ -1.83
CHL1	YPL008W	PDA1	P16387	420 aa	Known RBP	3.65	□□□□□ -1.83
CHL1	YPL008W	ACH1	P32316	526 aa		3.65	□□□□□ -1.83
CHL1	YPL008W	FET3	P38993	636 aa		3.65	□□□□□ -1.83
CHL1	YPL008W	LOC1	P43586	204 aa	Predicted RBP	3.65	□□□□□ -1.83
CHL1	YPL008W	ALK1	P43633	760 aa	Known RBP	3.65	□□□□□ -1.83
CHL1	YPL008W	SFH5	P47008	294 aa		3.65	□□□□□ -1.83
CHL1	YPL008W	SNX4	P47057	423 aa		3.65	□□□□□ -1.83
CHL1	YPL008W	CCC1	P47818	322 aa		3.65	□□□□□ -1.83
CHL1	YPL008W	MNN10	P50108	393 aa	Known RBP	3.65	□□□□□ -1.83
CHL1	YPL008W	FHN1	P53279	174 aa		3.65	□□□□□ -1.83
CHL1	YPL008W	YDR541C	Q03049	344 aa		3.65	□□□□□ -1.83
CHL1	YPL008W	CTL1	Q03220	320 aa	Known RBP	3.65	□□□□□ -1.83
CHL1	YPL008W	PEX30	Q06169	523 aa		3.65	□□□□□ -1.83
CHL1	YPL008W	FRE5	Q08908	694 aa		3.65	□□□□□ -1.83
CHL1	YPL008W	BTS1	Q12051	335 aa		3.65	□□□□□ -1.83
CHL1	YPL008W	YDL109C	Q12103	647 aa		3.65	□□□□□ -1.83
CHL1	YPL008W	PAR32	Q12515	295 aa	Known RBP	3.65	□□□□□ -1.83
CHL1	YPL008W	YLR099W-A	Q3E798	87 aa		3.65	□□□□□ -1.83
CHL1	YPL008W	YOS9	Q99220	542 aa		3.65	□□□□□ -1.83
CHL1	YPL008W	DFG16	Q99234	619 aa		3.65	□□□□□ -1.83
CHL1	YPL008W	GCN4	P03069	281 aa		3.64	□□□□□ -1.83
CHL1	YPL008W	CDC23	P16522	626 aa		3.64	□□□□□ -1.83
CHL1	YPL008W	ERD2	P18414	219 aa		3.64	□□□□□ -1.83
CHL1	YPL008W	STE50	P25344	346 aa		3.64	□□□□□ -1.83
CHL1	YPL008W	YCR016W	P25617	290 aa	Known RBP	3.64	□□□□□ -1.83
CHL1	YPL008W	TIM12	P32830	109 aa		3.64	□□□□□ -1.83
CHL1	YPL008W	LST4	P34239	828 aa		3.64	□□□□□ -1.83
CHL1	YPL008W	CHK1	P38147	527 aa		3.64	□□□□□ -1.83
CHL1	YPL008W	PHO90	P39535	881 aa		3.64	□□□□□ -1.83
CHL1	YPL008W	VPS52	P39904	641 aa		3.64	□□□□□ -1.83
CHL1	YPL008W	DPB11	P47027	764 aa	Predicted RBP	3.64	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms