RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	YJR096W	P47137	282 aa		4.91	□□□□□ -1.62
CSL4	YNL232W	UBC13	P52490	153 aa		4.91	□□□□□ -1.62
CSL4	YNL232W	HMO1	Q03973	246 aa	Known RBP	4.91	□□□□□ -1.62
CSL4	YNL232W	YPR147C	Q06522	304 aa	Known RBP	4.91	□□□□□ -1.62
CSL4	YNL232W	NDL1	Q06568	189 aa		4.91	□□□□□ -1.62
CSL4	YNL232W	FIT3	Q08907	204 aa		4.91	□□□□□ -1.62
CSL4	YNL232W	RTC5	Q12108	567 aa	Known RBP	4.91	□□□□□ -1.62
CSL4	YNL232W	ISA2	Q12425	185 aa		4.91	□□□□□ -1.62
CSL4	YNL232W	YIL002W-A	Q3E7Z5	69 aa		4.91	□□□□□ -1.62
CSL4	YNL232W	FSH3	Q99369	266 aa		4.91	□□□□□ -1.62
CSL4	YNL232W	ARG81	P05085	880 aa		4.9	□□□□□ -1.63
CSL4	YNL232W	PUT2	P07275	575 aa		4.9	□□□□□ -1.63
CSL4	YNL232W	SEC12	P11655	471 aa		4.9	□□□□□ -1.63
CSL4	YNL232W	LHP1	P33399	275 aa	Known RBP	4.9	□□□□□ -1.63
CSL4	YNL232W	YHC3	P47040	408 aa		4.9	□□□□□ -1.63
CSL4	YNL232W	SLD3	P53135	668 aa		4.9	□□□□□ -1.63
CSL4	YNL232W	YML119W	Q03208	357 aa		4.9	□□□□□ -1.63
CSL4	YNL232W	YMR317W	Q04893	1140 aa		4.9	□□□□□ -1.63
CSL4	YNL232W	YLR413W	Q06689	675 aa		4.9	□□□□□ -1.63
CSL4	YNL232W	MUM3	Q08750	479 aa		4.9	□□□□□ -1.63
CSL4	YNL232W	YOR343C	Q12484	108 aa		4.9	□□□□□ -1.63
CSL4	YNL232W	SAS5	Q99314	248 aa		4.9	□□□□□ -1.63
CSL4	YNL232W	RPS23A	P0CX29	145 aa	Known RBP	4.89	□□□□□ -1.63
CSL4	YNL232W	RPS23B	P0CX30	145 aa		4.89	□□□□□ -1.63
CSL4	YNL232W	RPS16A	P0CX51	143 aa	Known RBP	4.89	□□□□□ -1.63
CSL4	YNL232W	RPS16B	P0CX52	143 aa	Known RBP	4.89	□□□□□ -1.63
CSL4	YNL232W	CKA1	P15790	372 aa		4.89	□□□□□ -1.63
CSL4	YNL232W	CLB3	P24870	427 aa		4.89	□□□□□ -1.63
CSL4	YNL232W	GIT1	P25346	518 aa		4.89	□□□□□ -1.63
CSL4	YNL232W	HSP30	P25619	332 aa		4.89	□□□□□ -1.63
CSL4	YNL232W	ERG3	P32353	365 aa		4.89	□□□□□ -1.63
CSL4	YNL232W	DAL3	P32459	195 aa		4.89	□□□□□ -1.63
CSL4	YNL232W	ACP1	P32463	125 aa		4.89	□□□□□ -1.63
CSL4	YNL232W	DPH5	P32469	300 aa	Predicted RBP	4.89	□□□□□ -1.63
CSL4	YNL232W	CLB6	P32943	380 aa		4.89	□□□□□ -1.63
CSL4	YNL232W	SLC1	P33333	303 aa		4.89	□□□□□ -1.63
CSL4	YNL232W	ROT2	P38138	954 aa		4.89	□□□□□ -1.63
CSL4	YNL232W	ZTA1	P38230	334 aa	Known RBP	4.89	□□□□□ -1.63
CSL4	YNL232W	ECM8	P38246	354 aa		4.89	□□□□□ -1.63
CSL4	YNL232W	TSC10	P38342	320 aa		4.89	□□□□□ -1.63
CSL4	YNL232W	LNP1	P38878	278 aa		4.89	□□□□□ -1.63
CSL4	YNL232W	KRE29	P40026	464 aa		4.89	□□□□□ -1.63
CSL4	YNL232W	EOS1	P53938	366 aa		4.89	□□□□□ -1.63
CSL4	YNL232W	APJ1	P53940	528 aa		4.89	□□□□□ -1.63
CSL4	YNL232W	YMR279C	Q03263	540 aa		4.89	□□□□□ -1.63
CSL4	YNL232W	RLM1	Q12224	676 aa		4.89	□□□□□ -1.63
CSL4	YNL232W	YOL114C	Q12322	202 aa		4.89	□□□□□ -1.63
CSL4	YNL232W	YHR214C-E	Q8TGK0	99 aa		4.89	□□□□□ -1.63
CSL4	YNL232W	PEP4	P07267	405 aa	Known RBP	4.88	□□□□□ -1.63
CSL4	YNL232W	PCL2	P25693	308 aa		4.88	□□□□□ -1.63
CSL4	YNL232W	ASF2	P32448	525 aa	Predicted RBP	4.88	□□□□□ -1.63
CSL4	YNL232W	SPT10	P35208	640 aa		4.88	□□□□□ -1.63
CSL4	YNL232W	OAF3	P36023	863 aa		4.88	□□□□□ -1.63
CSL4	YNL232W	YBR138C	P38277	524 aa		4.88	□□□□□ -1.63
CSL4	YNL232W	PEX32	P38292	413 aa		4.88	□□□□□ -1.63
CSL4	YNL232W	AIM10	P39965	576 aa	Known RBP	4.88	□□□□□ -1.63
CSL4	YNL232W	YEL068C	P39977	110 aa		4.88	□□□□□ -1.63
CSL4	YNL232W	IMA5	P40884	581 aa		4.88	□□□□□ -1.63
CSL4	YNL232W	GCN20	P43535	752 aa	Known RBP	4.88	□□□□□ -1.63
CSL4	YNL232W	COS1	P53822	381 aa		4.88	□□□□□ -1.63
CSL4	YNL232W	CUS2	P53830	285 aa	Predicted RBP	4.88	□□□□□ -1.63
CSL4	YNL232W	YNL046W	P53956	172 aa		4.88	□□□□□ -1.63
CSL4	YNL232W	TPO3	Q06451	622 aa		4.88	□□□□□ -1.63
CSL4	YNL232W	UIP4	Q08926	304 aa		4.88	□□□□□ -1.63
CSL4	YNL232W	YCL048W-A	Q2V2Q2	79 aa		4.88	□□□□□ -1.63
CSL4	YNL232W	RPB8	P20436	146 aa		4.87	□□□□□ -1.63
CSL4	YNL232W	RGI1	P40043	161 aa	Predicted RBP	4.87	□□□□□ -1.63
CSL4	YNL232W	NOP9	P47077	666 aa	Known RBP	4.87	□□□□□ -1.63
CSL4	YNL232W	YGR151C	P53287	111 aa		4.87	□□□□□ -1.63
CSL4	YNL232W	YPL077C	Q02831	240 aa		4.87	□□□□□ -1.63
CSL4	YNL232W	RSC9	Q03124	581 aa		4.87	□□□□□ -1.63
CSL4	YNL232W	RVB1	Q03940	463 aa	Known RBP	4.87	□□□□□ -1.63
CSL4	YNL232W	HLR1	Q04429	423 aa		4.87	□□□□□ -1.63
CSL4	YNL232W	SSQ1	Q05931	657 aa	Predicted RBP	4.87	□□□□□ -1.63
CSL4	YNL232W	YLR345W	Q06137	509 aa		4.87	□□□□□ -1.63
CSL4	YNL232W	RPN6	Q12377	434 aa		4.87	□□□□□ -1.63
CSL4	YNL232W	RTN2	Q12443	393 aa		4.87	□□□□□ -1.63
CSL4	YNL232W	FRE6	Q12473	712 aa		4.87	□□□□□ -1.63
CSL4	YNL232W	SUI3	P09064	285 aa	Known RBP	4.86	□□□□□ -1.63
CSL4	YNL232W	APA2	P22108	325 aa		4.86	□□□□□ -1.63
CSL4	YNL232W	RPS1B	P23248	255 aa	Known RBP	4.86	□□□□□ -1.63
CSL4	YNL232W	STE50	P25344	346 aa		4.86	□□□□□ -1.63
CSL4	YNL232W	ECM4	P36156	370 aa		4.86	□□□□□ -1.63
CSL4	YNL232W	MRPL17	P36528	281 aa		4.86	□□□□□ -1.63
CSL4	YNL232W	ARN1	P38731	627 aa		4.86	□□□□□ -1.63
CSL4	YNL232W	BIG1	P38813	335 aa		4.86	□□□□□ -1.63
CSL4	YNL232W	MIT1	P40002	666 aa		4.86	□□□□□ -1.63
CSL4	YNL232W	ISC1	P40015	477 aa	Known RBP	4.86	□□□□□ -1.63
CSL4	YNL232W	AGE2	P40529	298 aa		4.86	□□□□□ -1.63
CSL4	YNL232W	DPB11	P47027	764 aa	Predicted RBP	4.86	□□□□□ -1.63
CSL4	YNL232W	CGR1	P53188	120 aa		4.86	□□□□□ -1.63
CSL4	YNL232W	TWF1	P53250	332 aa		4.86	□□□□□ -1.63
CSL4	YNL232W	YDR102C	Q03864	110 aa		4.86	□□□□□ -1.63
CSL4	YNL232W	GMC1	Q04399	608 aa		4.86	□□□□□ -1.63
CSL4	YNL232W	SSK1	Q07084	712 aa		4.86	□□□□□ -1.63
CSL4	YNL232W	COQ10	Q08058	207 aa		4.86	□□□□□ -1.63
CSL4	YNL232W	HMS1	Q12398	434 aa		4.86	□□□□□ -1.63
CSL4	YNL232W	YER190C-B	P0CX94	160 aa		4.85	□□□□□ -1.63
CSL4	YNL232W	YEL077W-A	P0CX95	160 aa		4.85	□□□□□ -1.63
CSL4	YNL232W	YGR296C-B	P0CX96	160 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms