RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W MRS2Q01926 470 aa1.46□□□□□ -2.18
CTK3YML112W SPO77Q06134 477 aa1.46□□□□□ -2.18
CTK3YML112W YAL063C-AQ3E791 96 aa1.46□□□□□ -2.18
CTK3YML112W HIS3P06633 220 aa1.45□□□□□ -2.18
CTK3YML112W SPL2P38839 148 aa1.45□□□□□ -2.18
CTK3YML112W GPI8P49018 411 aa1.45□□□□□ -2.18
CTK3YML112W UBC13P52490 153 aa1.45□□□□□ -2.18
CTK3YML112W SSU72P53538 206 aaPredicted RBP1.45□□□□□ -2.18
CTK3YML112W YMR209CQ03648 457 aa1.45□□□□□ -2.18
CTK3YML112W CAB5Q03941 241 aa1.45□□□□□ -2.18
CTK3YML112W MYO5Q04439 1219 aaKnown RBP1.45□□□□□ -2.18
CTK3YML112W YDR286CQ05530 114 aa1.45□□□□□ -2.18
CTK3YML112W SUE1Q06524 206 aa1.45□□□□□ -2.18
CTK3YML112W RTC5Q12108 567 aaKnown RBP1.45□□□□□ -2.18
CTK3YML112W ISD11Q6Q560 94 aa1.45□□□□□ -2.18
CTK3YML112W PET18P25362 215 aa1.44□□□□□ -2.18
CTK3YML112W BMH1P29311 267 aaKnown RBP1.44□□□□□ -2.18
CTK3YML112W KRE6P32486 720 aa1.44□□□□□ -2.18
CTK3YML112W IMP3P32899 183 aaPredicted RBP1.44□□□□□ -2.18
CTK3YML112W YBR062CP38239 180 aa1.44□□□□□ -2.18
CTK3YML112W SPT8P38915 602 aa1.44□□□□□ -2.18
CTK3YML112W SEN34P39707 275 aa1.44□□□□□ -2.18
CTK3YML112W PIR5P46999 287 aa1.44□□□□□ -2.18
CTK3YML112W LOH1P47055 219 aa1.44□□□□□ -2.18
CTK3YML112W RDS3Q06835 107 aaPredicted RBP1.44□□□□□ -2.18
CTK3YML112W PLB3Q08108 686 aa1.44□□□□□ -2.18
CTK3YML112W APC9Q12107 265 aa1.44□□□□□ -2.18
CTK3YML112W TDH1P00360 332 aaKnown RBP1.43□□□□□ -2.18
CTK3YML112W RPL31AP0C2H8 113 aaKnown RBP1.43□□□□□ -2.18
CTK3YML112W SAR1P20606 190 aaKnown RBP1.43□□□□□ -2.18
CTK3YML112W RPL5P26321 297 aaKnown RBP1.43□□□□□ -2.18
CTK3YML112W CAT2P32796 670 aaKnown RBP1.43□□□□□ -2.18
CTK3YML112W YKL063CP35725 167 aa1.43□□□□□ -2.18
CTK3YML112W YKL162CP36052 402 aa1.43□□□□□ -2.18
CTK3YML112W YPC1P38298 316 aa1.43□□□□□ -2.18
CTK3YML112W YHI9P38765 294 aa1.43□□□□□ -2.18
CTK3YML112W YHR045WP38775 560 aa1.43□□□□□ -2.18
CTK3YML112W FET3P38993 636 aa1.43□□□□□ -2.18
CTK3YML112W SSO2P39926 295 aa1.43□□□□□ -2.18
CTK3YML112W VAB2P40003 282 aa1.43□□□□□ -2.18
CTK3YML112W KEL2P50090 882 aa1.43□□□□□ -2.18
CTK3YML112W GRH1Q04410 372 aaKnown RBP1.43□□□□□ -2.18
CTK3YML112W SIA1Q12212 622 aa1.43□□□□□ -2.18
CTK3YML112W PAN1P32521 1480 aa1.43□□□□□ -2.18
CTK3YML112W YCR025CP25352 136 aa1.42□□□□□ -2.18
CTK3YML112W AEP1P32493 518 aa1.42□□□□□ -2.18
CTK3YML112W SWC5P38326 303 aa1.42□□□□□ -2.18
CTK3YML112W SUR2P38992 349 aa1.42□□□□□ -2.18
CTK3YML112W AIM20P40451 204 aa1.42□□□□□ -2.18
CTK3YML112W BAT2P47176 376 aaKnown RBP1.42□□□□□ -2.18
CTK3YML112W VOA1P53262 265 aa1.42□□□□□ -2.18
CTK3YML112W YPL077CQ02831 240 aa1.42□□□□□ -2.18
CTK3YML112W INO80P53115 1489 aa1.42□□□□□ -2.18
CTK3YML112W YMR316C-AI2HB70 103 aa1.41□□□□□ -2.18
CTK3YML112W RPL26AP05743 127 aaKnown RBP1.41□□□□□ -2.18
CTK3YML112W CAR2P07991 424 aaKnown RBP1.41□□□□□ -2.18
CTK3YML112W TPM1P17536 199 aaKnown RBP1.41□□□□□ -2.18
CTK3YML112W SCO1P23833 295 aa1.41□□□□□ -2.18
CTK3YML112W RAD51P25454 400 aa1.41□□□□□ -2.18
CTK3YML112W KRR1P25586 316 aaPredicted RBP1.41□□□□□ -2.18
CTK3YML112W ERG2P32352 222 aa1.41□□□□□ -2.18
CTK3YML112W SUA5P32579 426 aa1.41□□□□□ -2.18
CTK3YML112W COT1P32798 439 aa1.41□□□□□ -2.18
CTK3YML112W COY1P34237 679 aa1.41□□□□□ -2.18
CTK3YML112W YPT32P51996 222 aaKnown RBP1.41□□□□□ -2.18
CTK3YML112W RPL26BP53221 127 aaKnown RBP1.41□□□□□ -2.18
CTK3YML112W TIM11P81449 96 aaPredicted RBP1.41□□□□□ -2.18
CTK3YML112W YML018CQ03730 393 aa1.41□□□□□ -2.18
CTK3YML112W YMR166CQ03829 368 aa1.41□□□□□ -2.18
CTK3YML112W DPP1Q05521 289 aa1.41□□□□□ -2.18
CTK3YML112W ASR1Q06834 288 aa1.41□□□□□ -2.18
CTK3YML112W CHD1P32657 1468 aa1.4□□□□□ -2.19
CTK3YML112W ILV1P00927 576 aaKnown RBP1.4□□□□□ -2.19
CTK3YML112W VMA2P16140 517 aaKnown RBP1.4□□□□□ -2.19
CTK3YML112W TRX1P22217 103 aaKnown RBP1.4□□□□□ -2.19
CTK3YML112W CGI121Q03705 181 aaKnown RBP1.4□□□□□ -2.19
CTK3YML112W MGR3Q04472 501 aa1.4□□□□□ -2.19
CTK3YML112W STE23Q06010 1027 aa1.4□□□□□ -2.19
CTK3YML112W GPN3Q06543 272 aa1.4□□□□□ -2.19
CTK3YML112W PGC1Q08959 321 aa1.4□□□□□ -2.19
CTK3YML112W VPS68Q12016 184 aa1.4□□□□□ -2.19
CTK3YML112W ATG5Q12380 294 aa1.4□□□□□ -2.19
CTK3YML112W PAA1Q12447 191 aaKnown RBP1.4□□□□□ -2.19
CTK3YML112W GAL7P08431 366 aa1.39□□□□□ -2.19
CTK3YML112W TFS1P14306 219 aa1.39□□□□□ -2.19
CTK3YML112W MSS116P15424 664 aaKnown RBP1.39□□□□□ -2.19
CTK3YML112W ICL1P28240 557 aaPredicted RBP1.39□□□□□ -2.19
CTK3YML112W CAM1P29547 415 aaKnown RBP1.39□□□□□ -2.19
CTK3YML112W RPC37P36121 282 aa1.39□□□□□ -2.19
CTK3YML112W POP8P38208 133 aa1.39□□□□□ -2.19
CTK3YML112W AVT7P40501 490 aa1.39□□□□□ -2.19
CTK3YML112W GDS1P41913 522 aa1.39□□□□□ -2.19
CTK3YML112W GTO1P48239 356 aa1.39□□□□□ -2.19
CTK3YML112W TPN1P53099 579 aa1.39□□□□□ -2.19
CTK3YML112W TAF9Q05027 157 aa1.39□□□□□ -2.19
CTK3YML112W YPR172WQ06608 200 aa1.39□□□□□ -2.19
CTK3YML112W POM33Q12164 279 aa1.39□□□□□ -2.19
CTK3YML112W RAD3P06839 778 aa1.38□□□□□ -2.19
CTK3YML112W GCD2P12754 651 aaPredicted RBP1.38□□□□□ -2.19
CTK3YML112W RME1P32338 300 aaKnown RBP1.38□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 198.3 ms