RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PWP1	YLR196W	YHK8	P38776	514 aa		4.85	□□□□□ -1.63
PWP1	YLR196W	SHO1	P40073	367 aa		4.85	□□□□□ -1.63
PWP1	YLR196W	MOB1	P40484	314 aa		4.85	□□□□□ -1.63
PWP1	YLR196W	MAF1	P41910	395 aa		4.85	□□□□□ -1.63
PWP1	YLR196W	NIT2	P47016	307 aa		4.85	□□□□□ -1.63
PWP1	YLR196W	TAH11	P47112	604 aa		4.85	□□□□□ -1.63
PWP1	YLR196W	ASN1	P49089	572 aa	Known RBP	4.85	□□□□□ -1.63
PWP1	YLR196W	PHO23	P50947	330 aa		4.85	□□□□□ -1.63
PWP1	YLR196W	TIM13	P53299	105 aa		4.85	□□□□□ -1.63
PWP1	YLR196W	MKC7	P53379	596 aa		4.85	□□□□□ -1.63
PWP1	YLR196W	YDR366C	P87287	132 aa		4.85	□□□□□ -1.63
PWP1	YLR196W	ARG5,6	Q01217	863 aa		4.85	□□□□□ -1.63
PWP1	YLR196W	TRM44	Q02648	567 aa	Known RBP	4.85	□□□□□ -1.63
PWP1	YLR196W	TDA1	Q03533	586 aa		4.85	□□□□□ -1.63
PWP1	YLR196W	YMR160W	Q03823	816 aa		4.85	□□□□□ -1.63
PWP1	YLR196W	SYT1	Q06836	1226 aa		4.85	□□□□□ -1.63
PWP1	YLR196W	AAD15	Q08361	143 aa		4.85	□□□□□ -1.63
PWP1	YLR196W	SAM4	Q08985	325 aa	Known RBP	4.85	□□□□□ -1.63
PWP1	YLR196W	PER33	Q12144	273 aa		4.85	□□□□□ -1.63
PWP1	YLR196W	TY1A-BL	Q12266	440 aa		4.85	□□□□□ -1.63
PWP1	YLR196W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.85	□□□□□ -1.63
PWP1	YLR196W	PCC1	Q3E833	88 aa		4.85	□□□□□ -1.63
PWP1	YLR196W	YPT1	P01123	206 aa	Known RBP	4.84	□□□□□ -1.63
PWP1	YLR196W	SNF4	P12904	322 aa		4.84	□□□□□ -1.63
PWP1	YLR196W	NAR1	P23503	491 aa	Known RBP	4.84	□□□□□ -1.63
PWP1	YLR196W	CWP1	P28319	239 aa		4.84	□□□□□ -1.63
PWP1	YLR196W	SRB6	P32570	121 aa		4.84	□□□□□ -1.63
PWP1	YLR196W	GMH1	P36125	273 aa		4.84	□□□□□ -1.63
PWP1	YLR196W	VRP1	P37370	817 aa		4.84	□□□□□ -1.63
PWP1	YLR196W	RIB1	P38066	345 aa		4.84	□□□□□ -1.63
PWP1	YLR196W	RIM2	P38127	377 aa		4.84	□□□□□ -1.63
PWP1	YLR196W	PHO89	P38361	574 aa		4.84	□□□□□ -1.63
PWP1	YLR196W	YHR035W	P38769	630 aa		4.84	□□□□□ -1.63
PWP1	YLR196W	YHR127W	P38833	243 aa	Known RBP	4.84	□□□□□ -1.63
PWP1	YLR196W	PAC2	P39937	518 aa		4.84	□□□□□ -1.63
PWP1	YLR196W	YIL060W	P40519	144 aa		4.84	□□□□□ -1.63
PWP1	YLR196W	YFL052W	P43551	465 aa		4.84	□□□□□ -1.63
PWP1	YLR196W	SKP1	P52286	194 aa		4.84	□□□□□ -1.63
PWP1	YLR196W	STR3	P53101	465 aa	Known RBP	4.84	□□□□□ -1.63
PWP1	YLR196W	YNL260C	P53846	198 aa		4.84	□□□□□ -1.63
PWP1	YLR196W	TPS1	Q00764	495 aa	Known RBP	4.84	□□□□□ -1.63
PWP1	YLR196W	SPP2	Q02521	185 aa		4.84	□□□□□ -1.63
PWP1	YLR196W	TVP15	Q03860	143 aa		4.84	□□□□□ -1.63
PWP1	YLR196W	PKR1	Q03880	122 aa	Known RBP	4.84	□□□□□ -1.63
PWP1	YLR196W	SEC13	Q04491	297 aa	Known RBP	4.84	□□□□□ -1.63
PWP1	YLR196W	PUN1	Q06991	263 aa		4.84	□□□□□ -1.63
PWP1	YLR196W	AAD4	Q07747	329 aa		4.84	□□□□□ -1.63
PWP1	YLR196W	ATG10	Q07879	167 aa		4.84	□□□□□ -1.63
PWP1	YLR196W	MED7	Q08278	222 aa		4.84	□□□□□ -1.63
PWP1	YLR196W	FCY22	Q12119	530 aa		4.84	□□□□□ -1.63
PWP1	YLR196W	YOL114C	Q12322	202 aa		4.84	□□□□□ -1.63
PWP1	YLR196W	TFC7	Q12415	435 aa		4.84	□□□□□ -1.63
PWP1	YLR196W	FOL3	Q12676	427 aa	Predicted RBP	4.84	□□□□□ -1.63
PWP1	YLR196W	FLP1	P03870	423 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	SEC53	P07283	254 aa	Known RBP	4.83	□□□□□ -1.64
PWP1	YLR196W	STE18	P18852	110 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	SEC22	P22214	214 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	PPH21	P23594	369 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	ERG6	P25087	383 aa	Known RBP	4.83	□□□□□ -1.64
PWP1	YLR196W	SAT4	P25333	603 aa	Known RBP	4.83	□□□□□ -1.64
PWP1	YLR196W	FRE2	P36033	711 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	PSD1	P39006	500 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	RRG9	P40156	214 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	GAT2	P40209	560 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	QDR1	P40475	563 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	YFL040W	P43562	540 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	YFL012W	P43580	148 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	SSY5	P47002	699 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	GWT1	P47026	490 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	HSV2	P50079	448 aa	Predicted RBP	4.83	□□□□□ -1.64
PWP1	YLR196W	RTA1	P53047	317 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	YGL101W	P53144	215 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	NAM8	Q00539	523 aa	Known RBP	4.83	□□□□□ -1.64
PWP1	YLR196W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
PWP1	YLR196W	KIN4	Q01919	800 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	PLB2	Q03674	706 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	CGI121	Q03705	181 aa	Known RBP	4.83	□□□□□ -1.64
PWP1	YLR196W	TY1A-MR1	Q04215	440 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	AGE1	Q04412	482 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	YLR224W	Q05947	369 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	ATG33	Q06485	197 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	MRPL35	Q06678	367 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	NBP2	Q12163	236 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	RMD5	Q12508	421 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	YLR099W-A	Q3E798	87 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	YCR075W-A	Q3E830	75 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	YKL033W-A	Q86ZR7	236 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	YCL012C	Q8J0M4	134 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	RIB3	Q99258	208 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	YLR422W	Q06409	1932 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	CYC7	P00045	113 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	COX5B	P00425	151 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	RPS4A	P0CX35	261 aa	Known RBP	4.83	□□□□□ -1.64
PWP1	YLR196W	RPS4B	P0CX36	261 aa	Known RBP	4.83	□□□□□ -1.64
PWP1	YLR196W	DPM1	P14020	267 aa	Known RBP	4.83	□□□□□ -1.64
PWP1	YLR196W	PDA1	P16387	420 aa	Known RBP	4.83	□□□□□ -1.64
PWP1	YLR196W	PRE9	P23638	258 aa	Known RBP	4.83	□□□□□ -1.64
PWP1	YLR196W	YCR015C	P25616	317 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	SEC17	P32602	292 aa		4.83	□□□□□ -1.64
PWP1	YLR196W	MRPL24	P36525	258 aa	Predicted RBP	4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms