RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W BCH1Q05029 724 aa1.73□□□□□ -2.13
CFT2YLR115W NDE2Q07500 545 aa1.73□□□□□ -2.13
CFT2YLR115W HEM25Q07534 307 aa1.73□□□□□ -2.13
CFT2YLR115W GRE1Q08969 168 aa1.73□□□□□ -2.13
CFT2YLR115W TMS1Q12116 473 aa1.73□□□□□ -2.13
CFT2YLR115W NCE102Q12207 173 aaRIP-Chip data1.73□□□□□ -2.13not detected
CFT2YLR115W AYT1Q12226 474 aa1.73□□□□□ -2.13
CFT2YLR115W IZH4Q99393 312 aa1.73□□□□□ -2.13
CFT2YLR115W OPI3P05375 206 aa1.73□□□□□ -2.13
CFT2YLR115W ATP1P07251 545 aaKnown RBP1.73□□□□□ -2.13
CFT2YLR115W ISY1P21374 235 aaPredicted RBP1.73□□□□□ -2.13
CFT2YLR115W TPS2P31688 896 aaKnown RBP1.73□□□□□ -2.13
CFT2YLR115W ACB1P31787 87 aa1.73□□□□□ -2.13
CFT2YLR115W NUP2P32499 720 aa1.73□□□□□ -2.13
CFT2YLR115W ZUO1P32527 433 aaKnown RBP1.73□□□□□ -2.13
CFT2YLR115W CDC13P32797 924 aaKnown RBP1.73□□□□□ -2.13
CFT2YLR115W VPS21P36017 210 aaKnown RBP1.73□□□□□ -2.13
CFT2YLR115W HMT1P38074 348 aa1.73□□□□□ -2.13
CFT2YLR115W CHK1P38147 527 aa1.73□□□□□ -2.13
CFT2YLR115W RFT1P38206 574 aaPredicted RBP1.73□□□□□ -2.13
CFT2YLR115W YHR177WP38867 453 aa1.73□□□□□ -2.13
CFT2YLR115W JLP2P40206 208 aa1.73□□□□□ -2.13
CFT2YLR115W YJL213WP40896 331 aa1.73□□□□□ -2.13
CFT2YLR115W ERG10P41338 398 aaKnown RBP1.73□□□□□ -2.13
CFT2YLR115W YJR011CP47086 261 aaPredicted RBP1.73□□□□□ -2.13
CFT2YLR115W CCC1P47818 322 aa1.73□□□□□ -2.13
CFT2YLR115W NSA1P53136 463 aaPredicted RBP1.73□□□□□ -2.13
CFT2YLR115W CPD1P53314 239 aa1.73□□□□□ -2.13
CFT2YLR115W TRM112P53738 135 aaPredicted RBP1.73□□□□□ -2.13
CFT2YLR115W PRP38Q00723 242 aaPredicted RBP1.73□□□□□ -2.13
CFT2YLR115W SLD5Q03406 294 aa1.73□□□□□ -2.13
CFT2YLR115W TDA1Q03533 586 aa1.73□□□□□ -2.13
CFT2YLR115W HER2Q03557 464 aa1.73□□□□□ -2.13
CFT2YLR115W HSP31Q04432 237 aa1.73□□□□□ -2.13
CFT2YLR115W INM2Q05533 292 aa1.73□□□□□ -2.13
CFT2YLR115W CTR3Q06686 241 aa1.73□□□□□ -2.13
CFT2YLR115W ASR1Q06834 288 aa1.73□□□□□ -2.13
CFT2YLR115W PLB3Q08108 686 aa1.73□□□□□ -2.13
CFT2YLR115W LDS2Q08218 356 aa1.73□□□□□ -2.13
CFT2YLR115W ESA1Q08649 445 aa1.73□□□□□ -2.13
CFT2YLR115W MUM3Q08750 479 aa1.73□□□□□ -2.13
CFT2YLR115W RRP42Q12277 265 aaPredicted RBP1.73□□□□□ -2.13
CFT2YLR115W WTM1Q12363 437 aaKnown RBP1.73□□□□□ -2.13
CFT2YLR115W SNU23Q12368 194 aaPredicted RBP1.73□□□□□ -2.13
CFT2YLR115W NHP6AP11632 93 aaKnown RBP1.72□□□□□ -2.13
CFT2YLR115W RPS5P26783 225 aaKnown RBP1.72□□□□□ -2.13
CFT2YLR115W SKN1P33336 771 aa1.72□□□□□ -2.13
CFT2YLR115W SPO23P33757 523 aa1.72□□□□□ -2.13
CFT2YLR115W MCH2P36032 473 aa1.72□□□□□ -2.13
CFT2YLR115W BMT2P38278 337 aa1.72□□□□□ -2.13
CFT2YLR115W MTC4P38335 694 aaKnown RBP1.72□□□□□ -2.13
CFT2YLR115W LAG1P38703 411 aa1.72□□□□□ -2.13
CFT2YLR115W ATG7P38862 630 aa1.72□□□□□ -2.13
CFT2YLR115W RBG1P39729 369 aa1.72□□□□□ -2.13
CFT2YLR115W VPS52P39904 641 aa1.72□□□□□ -2.13
CFT2YLR115W DDI1P40087 428 aa1.72□□□□□ -2.13
CFT2YLR115W PRE6P40303 254 aaKnown RBP1.72□□□□□ -2.13
CFT2YLR115W RPL10P41805 221 aaKnown RBP1.72□□□□□ -2.13
CFT2YLR115W YFH7P43591 353 aa1.72□□□□□ -2.13
CFT2YLR115W CIN2P46670 268 aa1.72□□□□□ -2.13
CFT2YLR115W VMA10P48836 114 aaKnown RBP1.72□□□□□ -2.13
CFT2YLR115W VEL1P53058 206 aa1.72□□□□□ -2.13
CFT2YLR115W YIP3P53633 176 aa1.72□□□□□ -2.13
CFT2YLR115W YPL080CQ02826 108 aa1.72□□□□□ -2.13
CFT2YLR115W SNX41Q04053 625 aa1.72□□□□□ -2.13
CFT2YLR115W SPC24Q04477 213 aa1.72□□□□□ -2.13
CFT2YLR115W CDC123Q05791 360 aa1.72□□□□□ -2.13
CFT2YLR115W BNA5Q05979 453 aa1.72□□□□□ -2.13
CFT2YLR115W ASA1Q06822 443 aa1.72□□□□□ -2.13
CFT2YLR115W YOR387CQ08910 206 aa1.72□□□□□ -2.13
CFT2YLR115W YOR289WQ12012 251 aaPredicted RBP1.72□□□□□ -2.13
CFT2YLR115W YPL150WQ12152 901 aa1.72□□□□□ -2.13
CFT2YLR115W YOR114WQ12219 294 aa1.72□□□□□ -2.13
CFT2YLR115W YKL183C-AQ3E765 70 aa1.72□□□□□ -2.13
CFT2YLR115W TOM1Q03280 3268 aa1.72□□□□□ -2.13
CFT2YLR115W HEM2P05373 342 aa1.72□□□□□ -2.13
CFT2YLR115W ARF2P19146 181 aaKnown RBP1.72□□□□□ -2.13
CFT2YLR115W YKL063CP35725 167 aa1.72□□□□□ -2.13
CFT2YLR115W TCM62P38228 572 aaKnown RBP1.72□□□□□ -2.13
CFT2YLR115W IKI1P38874 309 aa1.72□□□□□ -2.13
CFT2YLR115W YKE4P40544 346 aa1.72□□□□□ -2.13
CFT2YLR115W YGR210CP42942 411 aa1.72□□□□□ -2.13
CFT2YLR115W YPI1P43587 155 aa1.72□□□□□ -2.13
CFT2YLR115W YJR012CP47087 207 aa1.72□□□□□ -2.13
CFT2YLR115W ADO1P47143 340 aaKnown RBP1.72□□□□□ -2.13
CFT2YLR115W HMS2P47175 358 aa1.72□□□□□ -2.13
CFT2YLR115W PRP24P49960 444 aaKnown RBP1.72□□□□□ -2.13
CFT2YLR115W COG7P53195 279 aa1.72□□□□□ -2.13
CFT2YLR115W MAK3Q03503 176 aa1.72□□□□□ -2.13
CFT2YLR115W YMR010WQ03687 405 aa1.72□□□□□ -2.13
CFT2YLR115W YDR387CQ04162 555 aa1.72□□□□□ -2.13
CFT2YLR115W NAT4Q04751 285 aa1.72□□□□□ -2.13
CFT2YLR115W YPD1Q07688 167 aa1.72□□□□□ -2.13
CFT2YLR115W TFC7Q12415 435 aa1.72□□□□□ -2.13
CFT2YLR115W LSO2Q3E772 92 aaKnown RBP1.72□□□□□ -2.13
CFT2YLR115W MEX67Q99257 599 aaKnown RBP1.72□□□□□ -2.13
CFT2YLR115W SPT3P06844 337 aa1.71□□□□□ -2.14
CFT2YLR115W PEP4P07267 405 aaKnown RBP1.71□□□□□ -2.14
CFT2YLR115W RPL20AP0CX23 172 aaKnown RBP1.71□□□□□ -2.14
CFT2YLR115W RPL20BP0CX24 172 aaPredicted RBP1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 52.6 ms