RNA–Protein interactions for RNA: YLR073C

RFU1, Transcript of Protein that inhibits Doa4p deubiquitinating activity, yeast

Gene RFU1, Length 603 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RFU1	YLR073C	RFA3	P26755	122 aa	Known RBP	4.09	□□□□□ -1.75
RFU1	YLR073C	CNE1	P27825	502 aa		4.09	□□□□□ -1.75
RFU1	YLR073C	UTP11	P34247	250 aa	Predicted RBP	4.09	□□□□□ -1.75
RFU1	YLR073C	SOR1	P35497	357 aa	Known RBP	4.09	□□□□□ -1.75
RFU1	YLR073C	YET1	P35723	206 aa		4.09	□□□□□ -1.75
RFU1	YLR073C	MCH2	P36032	473 aa		4.09	□□□□□ -1.75
RFU1	YLR073C	SWD2	P36104	329 aa	Predicted RBP	4.09	□□□□□ -1.75
RFU1	YLR073C	SHG1	P38337	142 aa		4.09	□□□□□ -1.75
RFU1	YLR073C	TSC10	P38342	320 aa		4.09	□□□□□ -1.75
RFU1	YLR073C	IKI1	P38874	309 aa		4.09	□□□□□ -1.75
RFU1	YLR073C	IDP2	P41939	412 aa		4.09	□□□□□ -1.75
RFU1	YLR073C	YFR020W	P43600	232 aa		4.09	□□□□□ -1.75
RFU1	YLR073C	TAD2	P47058	250 aa		4.09	□□□□□ -1.75
RFU1	YLR073C	SSN8	P47821	323 aa		4.09	□□□□□ -1.75
RFU1	YLR073C	FYV6	P53913	173 aa		4.09	□□□□□ -1.75
RFU1	YLR073C	BCH1	Q05029	724 aa		4.09	□□□□□ -1.75
RFU1	YLR073C	SOR2	Q07786	357 aa		4.09	□□□□□ -1.75
RFU1	YLR073C	THP1	Q08231	455 aa		4.09	□□□□□ -1.75
RFU1	YLR073C	YLR053C	Q12026	108 aa		4.09	□□□□□ -1.75
RFU1	YLR073C	JLP1	Q12358	412 aa		4.09	□□□□□ -1.75
RFU1	YLR073C	DDP1	Q99321	188 aa	Known RBP	4.09	□□□□□ -1.75
RFU1	YLR073C	IZH4	Q99393	312 aa		4.09	□□□□□ -1.75
RFU1	YLR073C	RPS28B	P0C0X0	67 aa	Known RBP	4.08	□□□□□ -1.76
RFU1	YLR073C	NHP6A	P11632	93 aa	Known RBP	4.08	□□□□□ -1.76
RFU1	YLR073C	AMD1	P15274	810 aa	Known RBP	4.08	□□□□□ -1.76
RFU1	YLR073C	ATP10	P18496	279 aa		4.08	□□□□□ -1.76
RFU1	YLR073C	RPO26	P20435	155 aa		4.08	□□□□□ -1.76
RFU1	YLR073C	CNA1	P23287	553 aa		4.08	□□□□□ -1.76
RFU1	YLR073C	NUP2	P32499	720 aa		4.08	□□□□□ -1.76
RFU1	YLR073C	YKL162C	P36052	402 aa		4.08	□□□□□ -1.76
RFU1	YLR073C	DER1	P38307	211 aa		4.08	□□□□□ -1.76
RFU1	YLR073C	YEL073C	P39974	107 aa		4.08	□□□□□ -1.76
RFU1	YLR073C	FMP52	P40008	231 aa		4.08	□□□□□ -1.76
RFU1	YLR073C	DDI1	P40087	428 aa		4.08	□□□□□ -1.76
RFU1	YLR073C	BUD13	P46947	266 aa	Predicted RBP	4.08	□□□□□ -1.76
RFU1	YLR073C	MDV1	P47025	714 aa		4.08	□□□□□ -1.76
RFU1	YLR073C	CCC1	P47818	322 aa		4.08	□□□□□ -1.76
RFU1	YLR073C	YGL235W	P53071	178 aa		4.08	□□□□□ -1.76
RFU1	YLR073C	PKP2	P53170	491 aa		4.08	□□□□□ -1.76
RFU1	YLR073C	IBD2	P53892	351 aa		4.08	□□□□□ -1.76
RFU1	YLR073C	YNL140C	P53910	189 aa		4.08	□□□□□ -1.76
RFU1	YLR073C	RHO3	Q00245	231 aa	Known RBP	4.08	□□□□□ -1.76
RFU1	YLR073C	YPL068C	Q02749	293 aa		4.08	□□□□□ -1.76
RFU1	YLR073C	GIP3	Q03016	1276 aa		4.08	□□□□□ -1.76
RFU1	YLR073C	YOR114W	Q12219	294 aa		4.08	□□□□□ -1.76
RFU1	YLR073C	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.08	□□□□□ -1.76
RFU1	YLR073C	RPL28	P02406	149 aa	Known RBP	4.07	□□□□□ -1.76
RFU1	YLR073C	CPA1	P07258	411 aa	Known RBP	4.07	□□□□□ -1.76
RFU1	YLR073C	DSF1	P0CX08	502 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	YNR073C	P0CX09	502 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	CBS2	P14905	389 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	CAM1	P29547	415 aa	Known RBP	4.07	□□□□□ -1.76
RFU1	YLR073C	ACB1	P31787	87 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	AEP1	P32493	518 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	CDC5	P32562	705 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	FMP46	P36141	133 aa	Known RBP	4.07	□□□□□ -1.76
RFU1	YLR073C	AIM3	P38266	947 aa	Known RBP	4.07	□□□□□ -1.76
RFU1	YLR073C	SSH1	P38353	490 aa	Known RBP	4.07	□□□□□ -1.76
RFU1	YLR073C	CUE1	P38428	203 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	RPP1	P38786	293 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	AIM18	P38884	321 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	YAT2	P40017	923 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	PHM8	P40025	321 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	LAS21	P40367	830 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	GAT1	P43574	510 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	CIN2	P46670	268 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	ALB1	P47019	175 aa	Predicted RBP	4.07	□□□□□ -1.76
RFU1	YLR073C	YJR011C	P47086	261 aa	Predicted RBP	4.07	□□□□□ -1.76
RFU1	YLR073C	YJR056C	P47115	236 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	GTR2	P53290	341 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	BIO4	P53630	237 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	YLR460C	P54007	376 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	SED5	Q01590	340 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	ROT1	Q03691	256 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	YDR248C	Q03786	193 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	YDR132C	Q03900	495 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	PBP4	Q07362	185 aa	Known RBP	4.07	□□□□□ -1.76
RFU1	YLR073C	YDL242W	Q07746	117 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	LDB18	Q07887	179 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	YLR031W	Q07978	186 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
RFU1	YLR073C	ACF2	Q12168	779 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	RIB2	Q12362	591 aa	Known RBP	4.07	□□□□□ -1.76
RFU1	YLR073C	YCL012C	Q8J0M4	134 aa		4.07	□□□□□ -1.76
RFU1	YLR073C	YDR157W	A0A023PZE8	133 aa		4.06	□□□□□ -1.76
RFU1	YLR073C	SIR3	P06701	978 aa		4.06	□□□□□ -1.76
RFU1	YLR073C	ARF1	P11076	181 aa	Known RBP	4.06	□□□□□ -1.76
RFU1	YLR073C	ITR2	P30606	609 aa		4.06	□□□□□ -1.76
RFU1	YLR073C	MRPL9	P31334	269 aa		4.06	□□□□□ -1.76
RFU1	YLR073C	TCA17	P32613	152 aa		4.06	□□□□□ -1.76
RFU1	YLR073C	GDA1	P32621	518 aa		4.06	□□□□□ -1.76
RFU1	YLR073C	BNA4	P38169	460 aa		4.06	□□□□□ -1.76
RFU1	YLR073C	PRE6	P40303	254 aa	Known RBP	4.06	□□□□□ -1.76
RFU1	YLR073C	YIA6	P40556	373 aa		4.06	□□□□□ -1.76
RFU1	YLR073C	TRS85	P46944	698 aa		4.06	□□□□□ -1.76
RFU1	YLR073C	SFH5	P47008	294 aa		4.06	□□□□□ -1.76
RFU1	YLR073C	YJL016W	P47072	561 aa		4.06	□□□□□ -1.76
RFU1	YLR073C	HOC1	P47124	396 aa		4.06	□□□□□ -1.76
RFU1	YLR073C	ADO1	P47143	340 aa	Known RBP	4.06	□□□□□ -1.76
RFU1	YLR073C	NAS6	P50086	228 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms