RNA–Protein interactions for RNA: YKR026C

GCN3, Transcript of Alpha subunit of translation initiation factor eIF2B, yeast

Gene GCN3, Length 918 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GCN3	YKR026C	INP1	Q03694	420 aa		5.99	□□□□□ -1.45
GCN3	YKR026C	THI73	Q07904	523 aa		5.99	□□□□□ -1.45
GCN3	YKR026C	COQ10	Q08058	207 aa		5.99	□□□□□ -1.45
GCN3	YKR026C	MMP1	Q12372	583 aa		5.99	□□□□□ -1.45
GCN3	YKR026C	TDH2	P00358	332 aa	Known RBP	5.98	□□□□□ -1.45
GCN3	YKR026C	REP2	P03872	296 aa		5.98	□□□□□ -1.45
GCN3	YKR026C	CHO1	P08456	276 aa		5.98	□□□□□ -1.45
GCN3	YKR026C	PUT1	P09368	476 aa		5.98	□□□□□ -1.45
GCN3	YKR026C	SAC7	P17121	654 aa		5.98	□□□□□ -1.45
GCN3	YKR026C	YCR061W	P25639	631 aa		5.98	□□□□□ -1.45
GCN3	YKR026C	PDC2	P32896	925 aa		5.98	□□□□□ -1.45
GCN3	YKR026C	TCM62	P38228	572 aa	Known RBP	5.98	□□□□□ -1.45
GCN3	YKR026C	ARO9	P38840	513 aa	Predicted RBP	5.98	□□□□□ -1.45
GCN3	YKR026C	TIF34	P40217	347 aa	Known RBP	5.98	□□□□□ -1.45
GCN3	YKR026C	BMT5	P40493	336 aa		5.98	□□□□□ -1.45
GCN3	YKR026C	RSM27	P53305	110 aa		5.98	□□□□□ -1.45
GCN3	YKR026C	ARG5,6	Q01217	863 aa		5.98	□□□□□ -1.45
GCN3	YKR026C	NCE101	Q02820	53 aa		5.98	□□□□□ -1.45
GCN3	YKR026C	MRX8	Q05473	314 aa		5.98	□□□□□ -1.45
GCN3	YKR026C	YPR109W	Q06104	294 aa		5.98	□□□□□ -1.45
GCN3	YKR026C	GAS2	Q06135	555 aa		5.98	□□□□□ -1.45
GCN3	YKR026C	AVO1	Q08236	1176 aa		5.98	□□□□□ -1.45
GCN3	YKR026C	YOR385W	Q08909	290 aa		5.98	□□□□□ -1.45
GCN3	YKR026C	SET6	Q12529	373 aa		5.98	□□□□□ -1.45
GCN3	YKR026C	PHO2	P07269	559 aa		5.97	□□□□□ -1.45
GCN3	YKR026C	MATALPHA1	P0CY06	175 aa		5.97	□□□□□ -1.45
GCN3	YKR026C	HMLALPHA1	P0CY07	175 aa		5.97	□□□□□ -1.45
GCN3	YKR026C	STE50	P25344	346 aa		5.97	□□□□□ -1.45
GCN3	YKR026C	DCG1	P32460	244 aa		5.97	□□□□□ -1.45
GCN3	YKR026C	SRB6	P32570	121 aa		5.97	□□□□□ -1.45
GCN3	YKR026C	CBT1	P36038	271 aa	Predicted RBP	5.97	□□□□□ -1.45
GCN3	YKR026C	SRP102	P36057	244 aa	Predicted RBP	5.97	□□□□□ -1.45
GCN3	YKR026C	RPP1	P38786	293 aa		5.97	□□□□□ -1.45
GCN3	YKR026C	NSG1	P38837	291 aa		5.97	□□□□□ -1.45
GCN3	YKR026C	FMO1	P38866	432 aa		5.97	□□□□□ -1.45
GCN3	YKR026C	PFS1	P38872	237 aa		5.97	□□□□□ -1.45
GCN3	YKR026C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	5.97	□□□□□ -1.45	not detected
GCN3	YKR026C	YIL067C	P40514	678 aa		5.97	□□□□□ -1.45
GCN3	YKR026C	YJR141W	P47172	347 aa	Predicted RBP	5.97	□□□□□ -1.45
GCN3	YKR026C	MPP6	P53725	186 aa	Predicted RBP	5.97	□□□□□ -1.45
GCN3	YKR026C	NRK1	P53915	240 aa		5.97	□□□□□ -1.45
GCN3	YKR026C	ERG13	P54839	491 aa	Known RBP	5.97	□□□□□ -1.45
GCN3	YKR026C	YDR444W	Q04093	687 aa		5.97	□□□□□ -1.45
GCN3	YKR026C	MRPL1	Q04599	285 aa		5.97	□□□□□ -1.45
GCN3	YKR026C	YFT2	Q06676	274 aa		5.97	□□□□□ -1.45
GCN3	YKR026C	ENB1	Q08299	606 aa		5.97	□□□□□ -1.45
GCN3	YKR026C	TMS1	Q12116	473 aa		5.97	□□□□□ -1.45
GCN3	YKR026C	LYS21	Q12122	440 aa	Known RBP	5.97	□□□□□ -1.45
GCN3	YKR026C	YLR108C	Q12259	485 aa		5.97	□□□□□ -1.45
GCN3	YKR026C	BMT6	Q12291	365 aa		5.97	□□□□□ -1.45
GCN3	YKR026C	TFB5	Q3E7C1	72 aa	Predicted RBP	5.97	□□□□□ -1.45
GCN3	YKR026C	AAC1	P04710	309 aa		5.96	□□□□□ -1.46
GCN3	YKR026C	MRP2	P10663	115 aa	Predicted RBP	5.96	□□□□□ -1.46
GCN3	YKR026C	FUS3	P16892	353 aa	Known RBP	5.96	□□□□□ -1.46
GCN3	YKR026C	SUA5	P32579	426 aa		5.96	□□□□□ -1.46
GCN3	YKR026C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	5.96	□□□□□ -1.46	not detected
GCN3	YKR026C	SRX1	P36077	127 aa		5.96	□□□□□ -1.46
GCN3	YKR026C	OCA5	P38738	679 aa		5.96	□□□□□ -1.46
GCN3	YKR026C	OSH7	P38755	437 aa		5.96	□□□□□ -1.46
GCN3	YKR026C	PZF1	P39933	429 aa		5.96	□□□□□ -1.46
GCN3	YKR026C	PAC1	P39946	494 aa	Known RBP	5.96	□□□□□ -1.46
GCN3	YKR026C	UTP25	P40498	721 aa	Known RBP	5.96	□□□□□ -1.46
GCN3	YKR026C	AVT7	P40501	490 aa		5.96	□□□□□ -1.46
GCN3	YKR026C	GLR1	P41921	483 aa	Known RBP	5.96	□□□□□ -1.46
GCN3	YKR026C	LYS20	P48570	428 aa	Known RBP	5.96	□□□□□ -1.46
GCN3	YKR026C	MNN10	P50108	393 aa	Known RBP	5.96	□□□□□ -1.46
GCN3	YKR026C	SLI1	P53304	468 aa		5.96	□□□□□ -1.46
GCN3	YKR026C	SWS2	P53937	143 aa		5.96	□□□□□ -1.46
GCN3	YKR026C	YDR249C	Q03787	373 aa		5.96	□□□□□ -1.46
GCN3	YKR026C	SPR28	Q04921	423 aa		5.96	□□□□□ -1.46
GCN3	YKR026C	NMA1	Q06178	401 aa	Known RBP	5.96	□□□□□ -1.46
GCN3	YKR026C	ANT1	Q06497	328 aa		5.96	□□□□□ -1.46
GCN3	YKR026C	NOC4	Q06512	552 aa	Predicted RBP	5.96	□□□□□ -1.46
GCN3	YKR026C	YPR174C	Q06616	221 aa	Predicted RBP	5.96	□□□□□ -1.46
GCN3	YKR026C	MCP1	Q12106	302 aa		5.96	□□□□□ -1.46
GCN3	YKR026C	RLM1	Q12224	676 aa		5.96	□□□□□ -1.46
GCN3	YKR026C	NPC2	Q12408	173 aa		5.96	□□□□□ -1.46
GCN3	YKR026C	MEX67	Q99257	599 aa	Known RBP	5.96	□□□□□ -1.46
GCN3	YKR026C	FAB1	P34756	2278 aa		5.95	□□□□□ -1.46
GCN3	YKR026C	SSA3	P09435	649 aa	Known RBP	5.95	□□□□□ -1.46
GCN3	YKR026C	RPL20A	P0CX23	172 aa	Known RBP	5.95	□□□□□ -1.46
GCN3	YKR026C	RPL20B	P0CX24	172 aa	Predicted RBP	5.95	□□□□□ -1.46
GCN3	YKR026C	GAS1	P22146	559 aa	Known RBP	5.95	□□□□□ -1.46
GCN3	YKR026C	GPI12	P23797	304 aa		5.95	□□□□□ -1.46
GCN3	YKR026C	FLO10	P36170	1169 aa		5.95	□□□□□ -1.46
GCN3	YKR026C	MRPL16	P38064	232 aa		5.95	□□□□□ -1.46
GCN3	YKR026C	YPC1	P38298	316 aa		5.95	□□□□□ -1.46
GCN3	YKR026C	LSM12	P38828	187 aa	Known RBP	5.95	□□□□□ -1.46
GCN3	YKR026C	CIN2	P46670	268 aa		5.95	□□□□□ -1.46
GCN3	YKR026C	SRB7	P47822	140 aa		5.95	□□□□□ -1.46
GCN3	YKR026C	YGR042W	P53227	271 aa		5.95	□□□□□ -1.46
GCN3	YKR026C	SCW4	P53334	386 aa	Known RBP	5.95	□□□□□ -1.46
GCN3	YKR026C	YLR460C	P54007	376 aa		5.95	□□□□□ -1.46
GCN3	YKR026C	YLR152C	P54072	576 aa		5.95	□□□□□ -1.46
GCN3	YKR026C	SMX3	P54999	86 aa	Predicted RBP	5.95	□□□□□ -1.46
GCN3	YKR026C	APM1	Q00776	475 aa	Predicted RBP	5.95	□□□□□ -1.46
GCN3	YKR026C	SNP1	Q00916	300 aa	Predicted RBP	5.95	□□□□□ -1.46
GCN3	YKR026C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	5.95	□□□□□ -1.46	not detected
GCN3	YKR026C	HNT1	Q04344	158 aa	Known RBP	5.95	□□□□□ -1.46
GCN3	YKR026C	YLR352W	Q06479	807 aa		5.95	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms