RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W RDR1Q08904 546 aa4.77□□□□□ -1.65
CBF1YJR060W SFG1Q12507 346 aa4.77□□□□□ -1.65
CBF1YJR060W TIM9O74700 87 aa4.76□□□□□ -1.65
CBF1YJR060W YFR010W-AP0C5N0 62 aa4.76□□□□□ -1.65
CBF1YJR060W YHR214C-DP0CX93 97 aa4.76□□□□□ -1.65
CBF1YJR060W ARF1P11076 181 aaKnown RBP4.76□□□□□ -1.65
CBF1YJR060W YAK1P14680 807 aa4.76□□□□□ -1.65
CBF1YJR060W STE50P25344 346 aa4.76□□□□□ -1.65
CBF1YJR060W RRP7P25368 297 aaPredicted RBP4.76□□□□□ -1.65
CBF1YJR060W IDH1P28834 360 aaKnown RBP RIP-Chip data4.76□□□□□ -1.65not detected
CBF1YJR060W ITR2P30606 609 aa4.76□□□□□ -1.65
CBF1YJR060W RPN2P32565 945 aaKnown RBP4.76□□□□□ -1.65
CBF1YJR060W SSE2P32590 693 aaKnown RBP4.76□□□□□ -1.65
CBF1YJR060W SNL1P40548 159 aa4.76□□□□□ -1.65
CBF1YJR060W RPE1P46969 238 aa4.76□□□□□ -1.65
CBF1YJR060W MDE1P47095 244 aa4.76□□□□□ -1.65
CBF1YJR060W PGU1P47180 361 aa4.76□□□□□ -1.65
CBF1YJR060W VMA10P48836 114 aaKnown RBP4.76□□□□□ -1.65
CBF1YJR060W TOS2P50078 622 aa4.76□□□□□ -1.65
CBF1YJR060W TPS1Q00764 495 aaKnown RBP4.76□□□□□ -1.65
CBF1YJR060W YDR541CQ03049 344 aa4.76□□□□□ -1.65
CBF1YJR060W INP1Q03694 420 aa4.76□□□□□ -1.65
CBF1YJR060W DPB4Q04603 196 aaKnown RBP4.76□□□□□ -1.65
CBF1YJR060W RNH202Q05635 350 aa4.76□□□□□ -1.65
CBF1YJR060W SYO1Q07395 620 aa4.76□□□□□ -1.65
CBF1YJR060W BRX1Q08235 291 aaKnown RBP4.76□□□□□ -1.65
CBF1YJR060W RSA1Q08932 381 aa4.76□□□□□ -1.65
CBF1YJR060W APC2Q12440 853 aa4.76□□□□□ -1.65
CBF1YJR060W DET1Q99288 334 aaKnown RBP4.76□□□□□ -1.65
CBF1YJR060W ADE5,7P07244 802 aaKnown RBP4.75□□□□□ -1.65
CBF1YJR060W PHO2P07269 559 aa4.75□□□□□ -1.65
CBF1YJR060W SNF4P12904 322 aa4.75□□□□□ -1.65
CBF1YJR060W HIR2P32480 875 aa4.75□□□□□ -1.65
CBF1YJR060W YBR144CP34215 104 aa4.75□□□□□ -1.65
CBF1YJR060W AST1P35183 429 aa4.75□□□□□ -1.65
CBF1YJR060W ECM15P35195 104 aa4.75□□□□□ -1.65
CBF1YJR060W MNN5P46982 586 aa4.75□□□□□ -1.65
CBF1YJR060W BAT2P47176 376 aaKnown RBP4.75□□□□□ -1.65
CBF1YJR060W BPL1P48445 690 aaPredicted RBP4.75□□□□□ -1.65
CBF1YJR060W RSN1Q03516 953 aa4.75□□□□□ -1.65
CBF1YJR060W EKI1Q03764 534 aa4.75□□□□□ -1.65
CBF1YJR060W MIX14Q04341 121 aa4.75□□□□□ -1.65
CBF1YJR060W YMR226CQ05016 267 aaKnown RBP4.75□□□□□ -1.65
CBF1YJR060W YDL218WQ07629 317 aa4.75□□□□□ -1.65
CBF1YJR060W RLM1Q12224 676 aa4.75□□□□□ -1.65
CBF1YJR060W FLO9P39712 1322 aa4.74□□□□□ -1.65
CBF1YJR060W ERD2P18414 219 aa4.74□□□□□ -1.65
CBF1YJR060W NUP1P20676 1076 aa4.74□□□□□ -1.65
CBF1YJR060W FAR1P21268 830 aa4.74□□□□□ -1.65
CBF1YJR060W AIM17P23180 465 aaKnown RBP4.74□□□□□ -1.65
CBF1YJR060W BUD5P25300 642 aaPredicted RBP4.74□□□□□ -1.65
CBF1YJR060W EHD3P28817 500 aa4.74□□□□□ -1.65
CBF1YJR060W SNC1P31109 117 aa4.74□□□□□ -1.65
CBF1YJR060W SAC1P32368 623 aaKnown RBP4.74□□□□□ -1.65
CBF1YJR060W HSP150P32478 413 aa4.74□□□□□ -1.65
CBF1YJR060W MRPL6P32904 214 aa4.74□□□□□ -1.65
CBF1YJR060W MDL1P33310 695 aa4.74□□□□□ -1.65
CBF1YJR060W JEN1P36035 616 aa4.74□□□□□ -1.65
CBF1YJR060W MTC4P38335 694 aaKnown RBP4.74□□□□□ -1.65
CBF1YJR060W PEX18P38855 283 aa4.74□□□□□ -1.65
CBF1YJR060W YHR180WP38868 163 aa4.74□□□□□ -1.65
CBF1YJR060W ALP1P38971 573 aa4.74□□□□□ -1.65
CBF1YJR060W GDI1P39958 451 aaKnown RBP4.74□□□□□ -1.65
CBF1YJR060W SPO73P40031 143 aa4.74□□□□□ -1.65
CBF1YJR060W HXT9P40885 567 aa4.74□□□□□ -1.65
CBF1YJR060W HXT14P42833 540 aa4.74□□□□□ -1.65
CBF1YJR060W CAK1P43568 368 aaPredicted RBP4.74□□□□□ -1.65
CBF1YJR060W PRM8P53174 237 aa4.74□□□□□ -1.65
CBF1YJR060W RPN14P53196 417 aa4.74□□□□□ -1.65
CBF1YJR060W SYF2P53277 215 aaPredicted RBP4.74□□□□□ -1.65
CBF1YJR060W COG5P53951 403 aa4.74□□□□□ -1.65
CBF1YJR060W HXT11P54862 567 aa4.74□□□□□ -1.65
CBF1YJR060W YML122CQ03207 126 aa4.74□□□□□ -1.65
CBF1YJR060W FIN1Q03898 291 aa4.74□□□□□ -1.65
CBF1YJR060W RRG7Q08774 242 aaPredicted RBP4.74□□□□□ -1.65
CBF1YJR060W YDL109CQ12103 647 aa4.74□□□□□ -1.65
CBF1YJR060W MCP1Q12106 302 aa4.74□□□□□ -1.65
CBF1YJR060W NFI1Q12216 726 aa4.74□□□□□ -1.65
CBF1YJR060W BLM10P43583 2143 aa4.73□□□□□ -1.65
CBF1YJR060W PEP4P07267 405 aaKnown RBP4.73□□□□□ -1.65
CBF1YJR060W ATR1P13090 542 aa4.73□□□□□ -1.65
CBF1YJR060W UBC8P28263 218 aa4.73□□□□□ -1.65
CBF1YJR060W GSH1P32477 678 aa4.73□□□□□ -1.65
CBF1YJR060W TRS65P32893 560 aa4.73□□□□□ -1.65
CBF1YJR060W TIF3P34167 436 aaKnown RBP4.73□□□□□ -1.65
CBF1YJR060W GPX1P36014 167 aa4.73□□□□□ -1.65
CBF1YJR060W YPT53P36019 220 aa4.73□□□□□ -1.65
CBF1YJR060W ICS2P38284 255 aa4.73□□□□□ -1.65
CBF1YJR060W RRP4P38792 359 aaKnown RBP4.73□□□□□ -1.65
CBF1YJR060W GPI16P38875 610 aa4.73□□□□□ -1.65
CBF1YJR060W COG3P40094 801 aa4.73□□□□□ -1.65
CBF1YJR060W REE1P40893 198 aa4.73□□□□□ -1.65
CBF1YJR060W PHB1P40961 287 aa4.73□□□□□ -1.65
CBF1YJR060W YJL055WP47044 245 aa4.73□□□□□ -1.65
CBF1YJR060W YPL039WQ03080 316 aa4.73□□□□□ -1.65
CBF1YJR060W ABZ2Q03266 374 aa4.73□□□□□ -1.65
CBF1YJR060W SDC1Q03323 175 aa4.73□□□□□ -1.65
CBF1YJR060W DML1Q03652 475 aa4.73□□□□□ -1.65
CBF1YJR060W YPR127WQ06494 345 aa4.73□□□□□ -1.65
CBF1YJR060W DTD1Q07648 150 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms