RNA–Protein interactions for RNA: YJL054W

TIM54, Transcript of Component of the mitochondrial TIM22 complex, yeastyeast

Gene TIM54, Length 1,437 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM54YJL054W Q0297Q9ZZV8 51 aa4.71□□□□□ -1.66
TIM54YJL054W BLM10P43583 2143 aa4.7□□□□□ -1.66
TIM54YJL054W YOL162WP0CF19 215 aa4.7□□□□□ -1.66
TIM54YJL054W RPL35AP0CX84 120 aaKnown RBP4.7□□□□□ -1.66
TIM54YJL054W RPL35BP0CX85 120 aaKnown RBP4.7□□□□□ -1.66
TIM54YJL054W SEC12P11655 471 aa4.7□□□□□ -1.66
TIM54YJL054W EXG1P23776 448 aaKnown RBP4.7□□□□□ -1.66
TIM54YJL054W RRP7P25368 297 aaPredicted RBP4.7□□□□□ -1.66
TIM54YJL054W ARC19P33204 171 aaKnown RBP4.7□□□□□ -1.66
TIM54YJL054W NIC96P34077 839 aa4.7□□□□□ -1.66
TIM54YJL054W GDT1P38301 280 aaPredicted RBP4.7□□□□□ -1.66
TIM54YJL054W YBR220CP38318 560 aa4.7□□□□□ -1.66
TIM54YJL054W SSZ1P38788 538 aaKnown RBP4.7□□□□□ -1.66
TIM54YJL054W GDS1P41913 522 aa4.7□□□□□ -1.66
TIM54YJL054W IRC7P43623 340 aa4.7□□□□□ -1.66
TIM54YJL054W MDE1P47095 244 aa4.7□□□□□ -1.66
TIM54YJL054W MRP51Q02950 344 aa4.7□□□□□ -1.66
TIM54YJL054W HFD1Q04458 532 aa4.7□□□□□ -1.66
TIM54YJL054W SNO4Q04902 237 aa4.7□□□□□ -1.66
TIM54YJL054W MCM21Q06675 368 aa4.7□□□□□ -1.66
TIM54YJL054W HSP33Q08914 237 aaKnown RBP4.7□□□□□ -1.66
TIM54YJL054W HSP32Q08992 237 aa4.7□□□□□ -1.66
TIM54YJL054W RTC5Q12108 567 aaKnown RBP4.7□□□□□ -1.66
TIM54YJL054W YOL159C-AQ3E769 90 aa4.7□□□□□ -1.66
TIM54YJL054W SPO7P18410 259 aa4.69□□□□□ -1.66
TIM54YJL054W CNA1P23287 553 aa4.69□□□□□ -1.66
TIM54YJL054W PRP28P23394 588 aa4.69□□□□□ -1.66
TIM54YJL054W PRE2P30656 287 aaKnown RBP4.69□□□□□ -1.66
TIM54YJL054W PDX3P38075 228 aaKnown RBP4.69□□□□□ -1.66
TIM54YJL054W SWD1P39706 426 aa4.69□□□□□ -1.66
TIM54YJL054W YER084WP40057 128 aa4.69□□□□□ -1.66
TIM54YJL054W RET2P43621 546 aa4.69□□□□□ -1.66
TIM54YJL054W SIP18P50263 79 aa4.69□□□□□ -1.66
TIM54YJL054W MRK1P50873 501 aa4.69□□□□□ -1.66
TIM54YJL054W DML1Q03652 475 aa4.69□□□□□ -1.66
TIM54YJL054W HMO1Q03973 246 aaKnown RBP4.69□□□□□ -1.66
TIM54YJL054W NDL1Q06568 189 aa4.69□□□□□ -1.66
TIM54YJL054W MIM1Q08176 113 aa4.69□□□□□ -1.66
TIM54YJL054W MED2Q12124 431 aa4.69□□□□□ -1.66
TIM54YJL054W NFI1Q12216 726 aa4.69□□□□□ -1.66
TIM54YJL054W SIR3P06701 978 aa4.68□□□□□ -1.66
TIM54YJL054W RPS16AP0CX51 143 aaKnown RBP4.68□□□□□ -1.66
TIM54YJL054W RPS16BP0CX52 143 aaKnown RBP4.68□□□□□ -1.66
TIM54YJL054W DPM1P14020 267 aaKnown RBP4.68□□□□□ -1.66
TIM54YJL054W URE2P23202 354 aaKnown RBP4.68□□□□□ -1.66
TIM54YJL054W CLB2P24869 491 aa4.68□□□□□ -1.66
TIM54YJL054W GIT1P25346 518 aa4.68□□□□□ -1.66
TIM54YJL054W DBF20P32328 564 aa4.68□□□□□ -1.66
TIM54YJL054W PAD1P33751 242 aaKnown RBP RIP-Chip data4.68□□□□□ -1.66not detected
TIM54YJL054W YER184CP39961 794 aa4.68□□□□□ -1.66
TIM54YJL054W ISC1P40015 477 aaKnown RBP4.68□□□□□ -1.66
TIM54YJL054W QRI1P43123 477 aaKnown RBP4.68□□□□□ -1.66
TIM54YJL054W DPB11P47027 764 aaPredicted RBP4.68□□□□□ -1.66
TIM54YJL054W BRR6P53062 197 aa4.68□□□□□ -1.66
TIM54YJL054W YGL101WP53144 215 aa4.68□□□□□ -1.66
TIM54YJL054W CTS2Q06350 511 aa4.68□□□□□ -1.66
TIM54YJL054W SWA2Q06677 668 aa4.68□□□□□ -1.66
TIM54YJL054W HRT1Q08273 121 aa4.68□□□□□ -1.66
TIM54YJL054W TMC1Q08422 150 aaPredicted RBP4.68□□□□□ -1.66
TIM54YJL054W SPC3Q12133 184 aa4.68□□□□□ -1.66
TIM54YJL054W HMS1Q12398 434 aa4.68□□□□□ -1.66
TIM54YJL054W DPH5P32469 300 aaPredicted RBP4.67□□□□□ -1.66
TIM54YJL054W PDB1P32473 366 aaKnown RBP4.67□□□□□ -1.66
TIM54YJL054W YIL012WP40551 113 aa4.67□□□□□ -1.66
TIM54YJL054W DIM1P41819 318 aaKnown RBP4.67□□□□□ -1.66
TIM54YJL054W GPG1P53130 126 aa4.67□□□□□ -1.66
TIM54YJL054W SLI1P53304 468 aa4.67□□□□□ -1.66
TIM54YJL054W COS1P53822 381 aa4.67□□□□□ -1.66
TIM54YJL054W ASI1P54074 624 aa4.67□□□□□ -1.66
TIM54YJL054W APM1Q00776 475 aaPredicted RBP4.67□□□□□ -1.66
TIM54YJL054W PET191Q02772 108 aa4.67□□□□□ -1.66
TIM54YJL054W RSM28Q03430 361 aa4.67□□□□□ -1.66
TIM54YJL054W YDR102CQ03864 110 aa4.67□□□□□ -1.66
TIM54YJL054W ACF2Q12168 779 aa4.67□□□□□ -1.66
TIM54YJL054W SIA1Q12212 622 aa4.67□□□□□ -1.66
TIM54YJL054W MDH3P32419 343 aaKnown RBP RIP-Chip data4.66□□□□□ -1.66not detected
TIM54YJL054W APE2P32454 952 aaKnown RBP4.66□□□□□ -1.66
TIM54YJL054W SPC34P36131 295 aa4.66□□□□□ -1.66
TIM54YJL054W MLH1P38920 769 aa4.66□□□□□ -1.66
TIM54YJL054W STB1P42845 420 aa4.66□□□□□ -1.66
TIM54YJL054W GZF3P42944 551 aaKnown RBP4.66□□□□□ -1.66
TIM54YJL054W AGP3P43548 558 aa4.66□□□□□ -1.66
TIM54YJL054W UBC11P52492 156 aa4.66□□□□□ -1.66
TIM54YJL054W PRM8P53174 237 aa4.66□□□□□ -1.66
TIM54YJL054W LAP3Q01532 483 aaKnown RBP RIP-Chip data4.66□□□□□ -1.66not detected
TIM54YJL054W FIT3Q08907 204 aa4.66□□□□□ -1.66
TIM54YJL054W GEP5Q12393 293 aa4.66□□□□□ -1.66
TIM54YJL054W YDL007C-AQ2V2Q0 85 aa4.66□□□□□ -1.66
TIM54YJL054W RPC40P07703 335 aaKnown RBP4.65□□□□□ -1.66
TIM54YJL054W SNF6P18888 332 aa4.65□□□□□ -1.66
TIM54YJL054W POL4P25615 582 aa4.65□□□□□ -1.66
TIM54YJL054W PPA2P28239 310 aa4.65□□□□□ -1.66
TIM54YJL054W DTR1P38125 572 aa4.65□□□□□ -1.66
TIM54YJL054W YHL044WP38727 235 aa4.65□□□□□ -1.66
TIM54YJL054W SPO73P40031 143 aa4.65□□□□□ -1.66
TIM54YJL054W PIG2P40187 538 aa4.65□□□□□ -1.66
TIM54YJL054W PRE6P40303 254 aaKnown RBP4.65□□□□□ -1.66
TIM54YJL054W NAS2P40555 220 aa4.65□□□□□ -1.66
TIM54YJL054W FAR7P43592 221 aa4.65□□□□□ -1.66
TIM54YJL054W MTM1P53320 366 aa4.65□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms