RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W CLB2P24869 491 aa5.33□□□□□ -1.56
PRE3YJL001W TIM12P32830 109 aa5.33□□□□□ -1.56
PRE3YJL001W TRS65P32893 560 aa5.33□□□□□ -1.56
PRE3YJL001W MTW1P39731 289 aa5.33□□□□□ -1.56
PRE3YJL001W KRE29P40026 464 aa5.33□□□□□ -1.56
PRE3YJL001W SNM1P40993 198 aa5.33□□□□□ -1.56
PRE3YJL001W YGR201CP42936 225 aa5.33□□□□□ -1.56
PRE3YJL001W CCT7P42943 550 aaKnown RBP5.33□□□□□ -1.56
PRE3YJL001W MPC1P53157 130 aaKnown RBP5.33□□□□□ -1.56
PRE3YJL001W RBG2P53295 368 aaKnown RBP5.33□□□□□ -1.56
PRE3YJL001W MTM1P53320 366 aa5.33□□□□□ -1.56
PRE3YJL001W DUG3P53871 357 aa5.33□□□□□ -1.56
PRE3YJL001W KRE28Q04431 385 aa5.33□□□□□ -1.56
PRE3YJL001W ARO10Q06408 635 aa5.33□□□□□ -1.56
PRE3YJL001W COQ10Q08058 207 aa5.33□□□□□ -1.56
PRE3YJL001W RTC5Q12108 567 aaKnown RBP5.33□□□□□ -1.56
PRE3YJL001W RNH203Q12338 110 aa5.33□□□□□ -1.56
PRE3YJL001W RTR2Q12378 196 aa5.33□□□□□ -1.56
PRE3YJL001W YHR214C-EQ8TGK0 99 aa5.33□□□□□ -1.56
PRE3YJL001W YER175W-AQ8TGU4 54 aa5.33□□□□□ -1.56
PRE3YJL001W RPL35AP0CX84 120 aaKnown RBP5.32□□□□□ -1.56
PRE3YJL001W RPL35BP0CX85 120 aaKnown RBP5.32□□□□□ -1.56
PRE3YJL001W DEP1P31385 405 aa5.32□□□□□ -1.56
PRE3YJL001W MDL1P33310 695 aa5.32□□□□□ -1.56
PRE3YJL001W YEL068CP39977 110 aa5.32□□□□□ -1.56
PRE3YJL001W YER188WP40103 239 aa5.32□□□□□ -1.56
PRE3YJL001W NUP57P48837 541 aa5.32□□□□□ -1.56
PRE3YJL001W YNL181WP53878 407 aa5.32□□□□□ -1.56
PRE3YJL001W CIK1Q01649 594 aa5.32□□□□□ -1.56
PRE3YJL001W SNO4Q04902 237 aa5.32□□□□□ -1.56
PRE3YJL001W GAT3Q07928 141 aa5.32□□□□□ -1.56
PRE3YJL001W RRT8Q08219 342 aa5.32□□□□□ -1.56
PRE3YJL001W HSP33Q08914 237 aaKnown RBP5.32□□□□□ -1.56
PRE3YJL001W HSP32Q08992 237 aa5.32□□□□□ -1.56
PRE3YJL001W NSL1Q12143 216 aa5.32□□□□□ -1.56
PRE3YJL001W THP2O13539 261 aaKnown RBP5.31□□□□□ -1.56
PRE3YJL001W UGA1P17649 471 aa5.31□□□□□ -1.56
PRE3YJL001W DBF2P22204 572 aa5.31□□□□□ -1.56
PRE3YJL001W GIT1P25346 518 aa5.31□□□□□ -1.56
PRE3YJL001W SAC1P32368 623 aaKnown RBP5.31□□□□□ -1.56
PRE3YJL001W MNS1P32906 549 aa5.31□□□□□ -1.56
PRE3YJL001W GPX1P36014 167 aa5.31□□□□□ -1.56
PRE3YJL001W YPT10P38146 199 aa5.31□□□□□ -1.56
PRE3YJL001W ARO9P38840 513 aaPredicted RBP5.31□□□□□ -1.56
PRE3YJL001W POP1P41812 875 aa5.31□□□□□ -1.56
PRE3YJL001W CAK1P43568 368 aaPredicted RBP5.31□□□□□ -1.56
PRE3YJL001W IMD4P50094 524 aaKnown RBP5.31□□□□□ -1.56
PRE3YJL001W HSP31Q04432 237 aa5.31□□□□□ -1.56
PRE3YJL001W TSR2Q06672 205 aaKnown RBP5.31□□□□□ -1.56
PRE3YJL001W SYO1Q07395 620 aa5.31□□□□□ -1.56
PRE3YJL001W SNA4Q07549 140 aa5.31□□□□□ -1.56
PRE3YJL001W FIT3Q08907 204 aa5.31□□□□□ -1.56
PRE3YJL001W YPL191CQ08930 360 aa5.31□□□□□ -1.56
PRE3YJL001W TAF3Q12297 353 aa5.31□□□□□ -1.56
PRE3YJL001W HMS1Q12398 434 aa5.31□□□□□ -1.56
PRE3YJL001W YLR302CO13544 120 aa5.3□□□□□ -1.56
PRE3YJL001W AAC1P04710 309 aa5.3□□□□□ -1.56
PRE3YJL001W RPS16AP0CX51 143 aaKnown RBP5.3□□□□□ -1.56
PRE3YJL001W RPS16BP0CX52 143 aaKnown RBP5.3□□□□□ -1.56
PRE3YJL001W CDC43P18898 376 aa5.3□□□□□ -1.56
PRE3YJL001W NUP1P20676 1076 aa5.3□□□□□ -1.56
PRE3YJL001W CSM1P25651 190 aa5.3□□□□□ -1.56
PRE3YJL001W CAM1P29547 415 aaKnown RBP5.3□□□□□ -1.56
PRE3YJL001W SNC1P31109 117 aa5.3□□□□□ -1.56
PRE3YJL001W MRE11P32829 692 aa5.3□□□□□ -1.56
PRE3YJL001W MSN4P33749 630 aa5.3□□□□□ -1.56
PRE3YJL001W LTV1P34078 463 aa5.3□□□□□ -1.56
PRE3YJL001W PEX18P38855 283 aa5.3□□□□□ -1.56
PRE3YJL001W IAH1P41734 238 aa5.3□□□□□ -1.56
PRE3YJL001W ABM1P47146 123 aa5.3□□□□□ -1.56
PRE3YJL001W YGL235WP53071 178 aa5.3□□□□□ -1.56
PRE3YJL001W YDR102CQ03864 110 aa5.3□□□□□ -1.56
PRE3YJL001W RVB1Q03940 463 aaKnown RBP5.3□□□□□ -1.56
PRE3YJL001W GGA1Q06336 557 aa5.3□□□□□ -1.56
PRE3YJL001W YPR127WQ06494 345 aa5.3□□□□□ -1.56
PRE3YJL001W SFM1Q12314 213 aa5.3□□□□□ -1.56
PRE3YJL001W YBR255C-AQ3E776 120 aa5.3□□□□□ -1.56
PRE3YJL001W YOL163WP0CF20 169 aa5.29□□□□□ -1.56
PRE3YJL001W RPS23AP0CX29 145 aaKnown RBP5.29□□□□□ -1.56
PRE3YJL001W RPS23BP0CX30 145 aa5.29□□□□□ -1.56
PRE3YJL001W YCR100CP25606 316 aa5.29□□□□□ -1.56
PRE3YJL001W RPS5P26783 225 aaKnown RBP5.29□□□□□ -1.56
PRE3YJL001W ECM15P35195 104 aa5.29□□□□□ -1.56
PRE3YJL001W SPT10P35208 640 aa5.29□□□□□ -1.56
PRE3YJL001W JEN1P36035 616 aa5.29□□□□□ -1.56
PRE3YJL001W ALP1P38971 573 aa5.29□□□□□ -1.56
PRE3YJL001W GDI1P39958 451 aaKnown RBP5.29□□□□□ -1.56
PRE3YJL001W MIT1P40002 666 aa5.29□□□□□ -1.56
PRE3YJL001W ISC1P40015 477 aaKnown RBP5.29□□□□□ -1.56
PRE3YJL001W HPM1P40481 377 aa5.29□□□□□ -1.56
PRE3YJL001W YMR279CQ03263 540 aa5.29□□□□□ -1.56
PRE3YJL001W SEC13Q04491 297 aaKnown RBP5.29□□□□□ -1.56
PRE3YJL001W YPR202WQ08993 238 aa5.29□□□□□ -1.56
PRE3YJL001W CNA1P23287 553 aa5.28□□□□□ -1.56
PRE3YJL001W CLB6P32943 380 aa5.28□□□□□ -1.56
PRE3YJL001W YKL071WP36086 256 aa5.28□□□□□ -1.56
PRE3YJL001W RCY1P39531 840 aa5.28□□□□□ -1.56
PRE3YJL001W NOP16P40007 231 aaKnown RBP5.28□□□□□ -1.56
PRE3YJL001W YER121WP40076 114 aa5.28□□□□□ -1.56
PRE3YJL001W GLR1P41921 483 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 114.5 ms