RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeast

Gene YPT35, Length 645 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT35	YHR105W	RPL23B	P0CX42	137 aa	Known RBP	3.17	□□□□□ -1.9
YPT35	YHR105W	POL30	P15873	258 aa	Known RBP	3.17	□□□□□ -1.9
YPT35	YHR105W	CBF1	P17106	351 aa		3.17	□□□□□ -1.9
YPT35	YHR105W	SAR1	P20606	190 aa	Known RBP	3.17	□□□□□ -1.9
YPT35	YHR105W	GPI12	P23797	304 aa		3.17	□□□□□ -1.9
YPT35	YHR105W	DAL2	P25335	343 aa		3.17	□□□□□ -1.9
YPT35	YHR105W	RRT12	P25381	491 aa		3.17	□□□□□ -1.9
YPT35	YHR105W	CPR3	P25719	182 aa		3.17	□□□□□ -1.9
YPT35	YHR105W	MGT1	P26188	188 aa		3.17	□□□□□ -1.9
YPT35	YHR105W	ICL1	P28240	557 aa	Predicted RBP	3.17	□□□□□ -1.9
YPT35	YHR105W	TFC1	P32367	649 aa		3.17	□□□□□ -1.9
YPT35	YHR105W	BAT1	P38891	393 aa	Known RBP	3.17	□□□□□ -1.9
YPT35	YHR105W	VPS45	P38932	577 aa		3.17	□□□□□ -1.9
YPT35	YHR105W	FCY21	P40039	528 aa		3.17	□□□□□ -1.9
YPT35	YHR105W	SCC4	P40090	624 aa		3.17	□□□□□ -1.9
YPT35	YHR105W	HAC1	P41546	238 aa		3.17	□□□□□ -1.9
YPT35	YHR105W	FMP32	P43557	207 aa		3.17	□□□□□ -1.9
YPT35	YHR105W	LOH1	P47055	219 aa		3.17	□□□□□ -1.9
YPT35	YHR105W	YJR054W	P47114	497 aa		3.17	□□□□□ -1.9
YPT35	YHR105W	MKC7	P53379	596 aa		3.17	□□□□□ -1.9
YPT35	YHR105W	FUS2	Q05670	677 aa		3.17	□□□□□ -1.9
YPT35	YHR105W	KAP95	Q06142	861 aa	Known RBP	3.17	□□□□□ -1.9
YPT35	YHR105W	RRT8	Q08219	342 aa		3.17	□□□□□ -1.9
YPT35	YHR105W	YPR202W	Q08993	238 aa		3.17	□□□□□ -1.9
YPT35	YHR105W	HRT3	Q12347	344 aa		3.17	□□□□□ -1.9
YPT35	YHR105W	APC2	Q12440	853 aa		3.17	□□□□□ -1.9
YPT35	YHR105W	FIG2	P25653	1609 aa		3.17	□□□□□ -1.9
YPT35	YHR105W	FLO11	P08640	1367 aa		3.16	□□□□□ -1.9
YPT35	YHR105W	YRF1-3	P0CX14	1859 aa		3.16	□□□□□ -1.9
YPT35	YHR105W	YRF1-7	P0CX15	1859 aa		3.16	□□□□□ -1.9
YPT35	YHR105W	YRF1-6	P53819	1859 aa		3.16	□□□□□ -1.9
YPT35	YHR105W	HEM4	P06174	275 aa		3.16	□□□□□ -1.9
YPT35	YHR105W	RPS18A	P0CX55	146 aa	Known RBP	3.16	□□□□□ -1.9
YPT35	YHR105W	RPS18B	P0CX56	146 aa	Predicted RBP	3.16	□□□□□ -1.9
YPT35	YHR105W	RSR1	P13856	272 aa		3.16	□□□□□ -1.9
YPT35	YHR105W	KSS1	P14681	368 aa		3.16	□□□□□ -1.9
YPT35	YHR105W	VPS3	P23643	1011 aa		3.16	□□□□□ -1.9
YPT35	YHR105W	RPL16A	P26784	199 aa	Known RBP	3.16	□□□□□ -1.9
YPT35	YHR105W	ARO2	P28777	376 aa	Known RBP	3.16	□□□□□ -1.9
YPT35	YHR105W	VMA5	P31412	392 aa	Known RBP	3.16	□□□□□ -1.9
YPT35	YHR105W	TPS2	P31688	896 aa	Known RBP	3.16	□□□□□ -1.9
YPT35	YHR105W	ECT1	P33412	323 aa		3.16	□□□□□ -1.9
YPT35	YHR105W	RCN1	P36054	211 aa		3.16	□□□□□ -1.9
YPT35	YHR105W	YBR242W	P38331	238 aa		3.16	□□□□□ -1.9
YPT35	YHR105W	GAA1	P39012	614 aa		3.16	□□□□□ -1.9
YPT35	YHR105W	GLG2	P47011	380 aa		3.16	□□□□□ -1.9
YPT35	YHR105W	OKP1	P53298	406 aa		3.16	□□□□□ -1.9
YPT35	YHR105W	RCF2	P53721	224 aa		3.16	□□□□□ -1.9
YPT35	YHR105W	PGA2	P53903	129 aa		3.16	□□□□□ -1.9
YPT35	YHR105W	SUR7	P54003	302 aa		3.16	□□□□□ -1.9
YPT35	YHR105W	GPI17	Q04080	534 aa		3.16	□□□□□ -1.9
YPT35	YHR105W	APC4	Q04601	652 aa		3.16	□□□□□ -1.9
YPT35	YHR105W	SPC2	Q04969	178 aa		3.16	□□□□□ -1.9
YPT35	YHR105W	BBP1	Q12365	385 aa		3.16	□□□□□ -1.9
YPT35	YHR105W	YPR1	Q12458	312 aa		3.16	□□□□□ -1.9
YPT35	YHR105W	NOT5	Q12514	560 aa	Predicted RBP	3.16	□□□□□ -1.9
YPT35	YHR105W	TDH1	P00360	332 aa	Known RBP	3.15	□□□□□ -1.91
YPT35	YHR105W	ILV1	P00927	576 aa	Known RBP	3.15	□□□□□ -1.91
YPT35	YHR105W	RPB5	P20434	215 aa		3.15	□□□□□ -1.91
YPT35	YHR105W	SPR1	P32603	445 aa		3.15	□□□□□ -1.91
YPT35	YHR105W	ETR1	P38071	380 aa		3.15	□□□□□ -1.91
YPT35	YHR105W	GOS1	P38736	223 aa		3.15	□□□□□ -1.91
YPT35	YHR105W	BIR1	P47134	954 aa		3.15	□□□□□ -1.91
YPT35	YHR105W	BIO3	P50277	480 aa		3.15	□□□□□ -1.91
YPT35	YHR105W	RMR1	P53060	241 aa		3.15	□□□□□ -1.91
YPT35	YHR105W	VAC7	P53950	1165 aa		3.15	□□□□□ -1.91
YPT35	YHR105W	TIM8	P57744	87 aa		3.15	□□□□□ -1.91
YPT35	YHR105W	SKI8	Q02793	397 aa	Predicted RBP	3.15	□□□□□ -1.91
YPT35	YHR105W	SCS7	Q03529	384 aa		3.15	□□□□□ -1.91
YPT35	YHR105W	YDR278C	Q05612	105 aa		3.15	□□□□□ -1.91
YPT35	YHR105W	YOR376W	Q08900	122 aa		3.15	□□□□□ -1.91
YPT35	YHR105W	DDC1	Q08949	612 aa		3.15	□□□□□ -1.91
YPT35	YHR105W	ATP16	Q12165	160 aa		3.15	□□□□□ -1.91
YPT35	YHR105W	FLO1	P32768	1537 aa		3.14	□□□□□ -1.91
YPT35	YHR105W	STE2	D6VTK4	431 aa		3.14	□□□□□ -1.91
YPT35	YHR105W	SSA3	P09435	649 aa	Known RBP	3.14	□□□□□ -1.91
YPT35	YHR105W	SPS100	P13130	326 aa		3.14	□□□□□ -1.91
YPT35	YHR105W	FBA1	P14540	359 aa	Known RBP	3.14	□□□□□ -1.91
YPT35	YHR105W	SKG6	P32900	734 aa	Predicted RBP	3.14	□□□□□ -1.91
YPT35	YHR105W	VPS21	P36017	210 aa	Known RBP	3.14	□□□□□ -1.91
YPT35	YHR105W	PDX3	P38075	228 aa	Known RBP	3.14	□□□□□ -1.91
YPT35	YHR105W	YHB1	P39676	399 aa	Known RBP	3.14	□□□□□ -1.91
YPT35	YHR105W	AIM10	P39965	576 aa	Known RBP	3.14	□□□□□ -1.91
YPT35	YHR105W	SER33	P40510	469 aa		3.14	□□□□□ -1.91
YPT35	YHR105W	MSS2	P40990	351 aa		3.14	□□□□□ -1.91
YPT35	YHR105W	YGR210C	P42942	411 aa		3.14	□□□□□ -1.91
YPT35	YHR105W	YPI1	P43587	155 aa		3.14	□□□□□ -1.91
YPT35	YHR105W	YFH7	P43591	353 aa		3.14	□□□□□ -1.91
YPT35	YHR105W	YFR057W	P43625	151 aa		3.14	□□□□□ -1.91
YPT35	YHR105W	CLD1	P53264	445 aa		3.14	□□□□□ -1.91
YPT35	YHR105W	LSB1	P53281	241 aa		3.14	□□□□□ -1.91
YPT35	YHR105W	YGR266W	P53326	701 aa		3.14	□□□□□ -1.91
YPT35	YHR105W	YNL260C	P53846	198 aa		3.14	□□□□□ -1.91
YPT35	YHR105W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
YPT35	YHR105W	YPL080C	Q02826	108 aa		3.14	□□□□□ -1.91
YPT35	YHR105W	TVP15	Q03860	143 aa		3.14	□□□□□ -1.91
YPT35	YHR105W	COA4	Q05809	96 aa		3.14	□□□□□ -1.91
YPT35	YHR105W	DIB1	Q06819	143 aa	Predicted RBP	3.14	□□□□□ -1.91
YPT35	YHR105W	SAM4	Q08985	325 aa	Known RBP	3.14	□□□□□ -1.91
YPT35	YHR105W	PRP46	Q12417	451 aa	Predicted RBP	3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms