RNA–Protein interactions for RNA: YHL025W

SNF6, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF6, Length 999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF6YHL025W LUC7Q07508 261 aaPredicted RBP10.09□□□□□ -0.79
SNF6YHL025W YPL272CQ08984 517 aa10.09□□□□□ -0.79
SNF6YHL025W RPS13P05756 151 aaKnown RBP10.08□□□□□ -0.8
SNF6YHL025W CTA1P15202 515 aa10.08□□□□□ -0.8
SNF6YHL025W CPR2P23285 205 aa10.08□□□□□ -0.8
SNF6YHL025W NFS1P25374 497 aa10.08□□□□□ -0.8
SNF6YHL025W PAU2P32612 120 aa10.08□□□□□ -0.8
SNF6YHL025W YBR137WP38276 179 aa10.08□□□□□ -0.8
SNF6YHL025W IPI1P38803 334 aaPredicted RBP10.08□□□□□ -0.8
SNF6YHL025W PAM16P42949 149 aa10.08□□□□□ -0.8
SNF6YHL025W UBX6P47049 396 aa10.08□□□□□ -0.8
SNF6YHL025W YGL260WP53056 76 aa10.08□□□□□ -0.8
SNF6YHL025W RSM28Q03430 361 aa10.08□□□□□ -0.8
SNF6YHL025W MSS11Q03825 758 aa10.08□□□□□ -0.8
SNF6YHL025W MRX8Q05473 314 aa10.08□□□□□ -0.8
SNF6YHL025W TSR2Q06672 205 aaKnown RBP10.08□□□□□ -0.8
SNF6YHL025W TMS1Q12116 473 aa10.08□□□□□ -0.8
SNF6YHL025W RTN2Q12443 393 aa10.08□□□□□ -0.8
SNF6YHL025W MSW1P04803 379 aa10.07□□□□□ -0.8
SNF6YHL025W STE12P13574 688 aa10.07□□□□□ -0.8
SNF6YHL025W CAM1P29547 415 aaKnown RBP10.07□□□□□ -0.8
SNF6YHL025W MCM10P32354 571 aa10.07□□□□□ -0.8
SNF6YHL025W TMA19P35691 167 aaKnown RBP10.07□□□□□ -0.8
SNF6YHL025W ANR2P36090 516 aaPredicted RBP10.07□□□□□ -0.8
SNF6YHL025W KAE1P36132 386 aa10.07□□□□□ -0.8
SNF6YHL025W PEX32P38292 413 aa10.07□□□□□ -0.8
SNF6YHL025W MRH4P53166 561 aa10.07□□□□□ -0.8
SNF6YHL025W YGR066CP53242 292 aa10.07□□□□□ -0.8
SNF6YHL025W AGE1Q04412 482 aa10.07□□□□□ -0.8
SNF6YHL025W RGC1Q06108 1083 aaKnown RBP10.07□□□□□ -0.8
SNF6YHL025W HMS1Q12398 434 aa10.07□□□□□ -0.8
SNF6YHL025W ATS1P31386 333 aa10.06□□□□□ -0.8
SNF6YHL025W SPT14P32363 452 aa10.06□□□□□ -0.8
SNF6YHL025W COS9P36034 407 aa10.06□□□□□ -0.8
SNF6YHL025W YGL204CP53089 101 aa10.06□□□□□ -0.8
SNF6YHL025W YKR005CQ02203 525 aa10.06□□□□□ -0.8
SNF6YHL025W SSY1Q03770 852 aa10.06□□□□□ -0.8
SNF6YHL025W SYC1Q08553 188 aaPredicted RBP10.06□□□□□ -0.8
SNF6YHL025W FLO9P39712 1322 aa10.06□□□□□ -0.8
SNF6YHL025W GCN4P03069 281 aa10.05□□□□□ -0.8
SNF6YHL025W SPO7P18410 259 aa10.05□□□□□ -0.8
SNF6YHL025W MDH2P22133 377 aa10.05□□□□□ -0.8
SNF6YHL025W HOM6P31116 359 aaKnown RBP10.05□□□□□ -0.8
SNF6YHL025W SFK1P35735 353 aa10.05□□□□□ -0.8
SNF6YHL025W CHS7P38843 316 aa10.05□□□□□ -0.8
SNF6YHL025W PTH1P38876 190 aaKnown RBP10.05□□□□□ -0.8
SNF6YHL025W MIT1P40002 666 aa10.05□□□□□ -0.8
SNF6YHL025W MSY1P48527 492 aa10.05□□□□□ -0.8
SNF6YHL025W RPA14P50106 137 aa10.05□□□□□ -0.8
SNF6YHL025W BSC5P53755 489 aa10.05□□□□□ -0.8
SNF6YHL025W PEX10Q05568 337 aa10.05□□□□□ -0.8
SNF6YHL025W CTS2Q06350 511 aa10.05□□□□□ -0.8
SNF6YHL025W MRPL35Q06678 367 aa10.05□□□□□ -0.8
SNF6YHL025W TIR4Q12218 487 aaPredicted RBP10.05□□□□□ -0.8
SNF6YHL025W YHR214C-EQ8TGK0 99 aa10.05□□□□□ -0.8
SNF6YHL025W HIS3P06633 220 aa10.04□□□□□ -0.8
SNF6YHL025W STE18P18852 110 aa10.04□□□□□ -0.8
SNF6YHL025W RPB10P22139 70 aa10.04□□□□□ -0.8
SNF6YHL025W PTC6P25646 442 aa10.04□□□□□ -0.8
SNF6YHL025W RPC34P32910 317 aa10.04□□□□□ -0.8
SNF6YHL025W SPT10P35208 640 aa10.04□□□□□ -0.8
SNF6YHL025W SLS1P42900 643 aa10.04□□□□□ -0.8
SNF6YHL025W MNN5P46982 586 aa10.04□□□□□ -0.8
SNF6YHL025W IRC18P47056 224 aa10.04□□□□□ -0.8
SNF6YHL025W LYS5P50113 272 aa10.04□□□□□ -0.8
SNF6YHL025W RSM24Q03976 319 aa10.04□□□□□ -0.8
SNF6YHL025W NNT1Q05874 261 aa10.04□□□□□ -0.8
SNF6YHL025W MCH4Q08268 501 aa10.04□□□□□ -0.8
SNF6YHL025W YRM1Q12340 786 aa10.04□□□□□ -0.8
SNF6YHL025W CDC9P04819 755 aa10.03□□□□□ -0.8
SNF6YHL025W RPS18AP0CX55 146 aaKnown RBP10.03□□□□□ -0.8
SNF6YHL025W RPS18BP0CX56 146 aaPredicted RBP10.03□□□□□ -0.8
SNF6YHL025W CAP2P13517 287 aa10.03□□□□□ -0.8
SNF6YHL025W KRR1P25586 316 aaPredicted RBP10.03□□□□□ -0.8
SNF6YHL025W MOH1P38191 138 aa10.03□□□□□ -0.8
SNF6YHL025W SDS24P38314 527 aa10.03□□□□□ -0.8
SNF6YHL025W BNA6P43619 295 aa10.03□□□□□ -0.8
SNF6YHL025W PRY1P47032 299 aa10.03□□□□□ -0.8
SNF6YHL025W DOC1P53068 250 aa10.03□□□□□ -0.8
SNF6YHL025W ARO8P53090 500 aaKnown RBP10.03□□□□□ -0.8
SNF6YHL025W RMD9P53140 646 aaKnown RBP10.03□□□□□ -0.8
SNF6YHL025W PET191Q02772 108 aa10.03□□□□□ -0.8
SNF6YHL025W AIM36Q03798 255 aa10.03□□□□□ -0.8
SNF6YHL025W YPL199CQ08954 240 aa10.03□□□□□ -0.8
SNF6YHL025W ATG41Q12048 136 aa10.03□□□□□ -0.8
SNF6YHL025W TY1A-BLQ12266 440 aa10.03□□□□□ -0.8
SNF6YHL025W Q0144Q9ZZW2 109 aa10.03□□□□□ -0.8
SNF6YHL025W SOD2P00447 233 aa10.02□□□□□ -0.81
SNF6YHL025W SCEIP03882 235 aa10.02□□□□□ -0.81
SNF6YHL025W ADK1P07170 222 aaKnown RBP10.02□□□□□ -0.81
SNF6YHL025W DBF2P22204 572 aa10.02□□□□□ -0.81
SNF6YHL025W MEK1P24719 497 aaPredicted RBP10.02□□□□□ -0.81
SNF6YHL025W SLZ1P40167 298 aa10.02□□□□□ -0.81
SNF6YHL025W MTM1P53320 366 aa10.02□□□□□ -0.81
SNF6YHL025W ERV29P53337 310 aa10.02□□□□□ -0.81
SNF6YHL025W RVB1Q03940 463 aaKnown RBP10.02□□□□□ -0.81
SNF6YHL025W NOP56Q12460 504 aaKnown RBP RIP-Chip data10.02□□□□□ -0.81not detected
SNF6YHL025W CBP6P07253 162 aaPredicted RBP10.01□□□□□ -0.81
SNF6YHL025W RIB7P33312 244 aa10.01□□□□□ -0.81
SNF6YHL025W SEC66P33754 206 aa10.01□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms