RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C BOS1P25385 244 aa6.18□□□□□ -1.42
PUP2YGR253C TFC1P32367 649 aa6.18□□□□□ -1.42
PUP2YGR253C ECM8P38246 354 aa6.18□□□□□ -1.42
PUP2YGR253C AMN1P38285 549 aaPredicted RBP6.18□□□□□ -1.42
PUP2YGR253C VBA2P38358 474 aaKnown RBP6.18□□□□□ -1.42
PUP2YGR253C TMA22P47089 198 aaPredicted RBP6.18□□□□□ -1.42
PUP2YGR253C SMM1P53720 384 aaKnown RBP6.18□□□□□ -1.42
PUP2YGR253C NUP49Q02199 472 aa6.18□□□□□ -1.42
PUP2YGR253C MSS11Q03825 758 aa6.18□□□□□ -1.42
PUP2YGR253C NNT1Q05874 261 aa6.18□□□□□ -1.42
PUP2YGR253C MRPL51Q06090 140 aaPredicted RBP6.18□□□□□ -1.42
PUP2YGR253C SYC1Q08553 188 aaPredicted RBP6.18□□□□□ -1.42
PUP2YGR253C ACF2Q12168 779 aa6.18□□□□□ -1.42
PUP2YGR253C RRI1Q12468 440 aa6.18□□□□□ -1.42
PUP2YGR253C DSF1P0CX08 502 aa6.17□□□□□ -1.42
PUP2YGR253C YNR073CP0CX09 502 aa6.17□□□□□ -1.42
PUP2YGR253C SGN1P40561 250 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
PUP2YGR253C CHA4P43634 648 aa6.17□□□□□ -1.42
PUP2YGR253C LOH1P47055 219 aa6.17□□□□□ -1.42
PUP2YGR253C HMS2P47175 358 aa6.17□□□□□ -1.42
PUP2YGR253C PPT1P53043 513 aa6.17□□□□□ -1.42
PUP2YGR253C RMD9P53140 646 aaKnown RBP6.17□□□□□ -1.42
PUP2YGR253C ABZ2Q03266 374 aa6.17□□□□□ -1.42
PUP2YGR253C YPR196WQ06595 470 aa6.17□□□□□ -1.42
PUP2YGR253C YLR126CQ12288 251 aa6.17□□□□□ -1.42
PUP2YGR253C YOL159C-AQ3E769 90 aa6.17□□□□□ -1.42
PUP2YGR253C MET3P08536 511 aa6.16□□□□□ -1.42
PUP2YGR253C STE18P18852 110 aa6.16□□□□□ -1.42
PUP2YGR253C PWP1P21304 576 aaKnown RBP6.16□□□□□ -1.42
PUP2YGR253C BUD5P25300 642 aaPredicted RBP6.16□□□□□ -1.42
PUP2YGR253C RPC82P32349 654 aa6.16□□□□□ -1.42
PUP2YGR253C CDC3P32457 520 aaKnown RBP6.16□□□□□ -1.42
PUP2YGR253C PRP19P32523 503 aaKnown RBP6.16□□□□□ -1.42
PUP2YGR253C SPC34P36131 295 aa6.16□□□□□ -1.42
PUP2YGR253C FAT1P38225 669 aa6.16□□□□□ -1.42
PUP2YGR253C ARO9P38840 513 aaPredicted RBP6.16□□□□□ -1.42
PUP2YGR253C BNA2P47125 453 aa6.16□□□□□ -1.42
PUP2YGR253C PRM8P53174 237 aa6.16□□□□□ -1.42
PUP2YGR253C ASI3P53983 676 aa6.16□□□□□ -1.42
PUP2YGR253C DIG2Q03373 323 aaKnown RBP6.16□□□□□ -1.42
PUP2YGR253C YMR317WQ04893 1140 aa6.16□□□□□ -1.42
PUP2YGR253C PIN3Q06449 215 aa6.16□□□□□ -1.42
PUP2YGR253C YLR108CQ12259 485 aa6.16□□□□□ -1.42
PUP2YGR253C RPS13P05756 151 aaKnown RBP6.15□□□□□ -1.42
PUP2YGR253C RPC34P32910 317 aa6.15□□□□□ -1.42
PUP2YGR253C SRP102P36057 244 aaPredicted RBP6.15□□□□□ -1.42
PUP2YGR253C FZO1P38297 855 aa6.15□□□□□ -1.42
PUP2YGR253C PHO90P39535 881 aa6.15□□□□□ -1.42
PUP2YGR253C SPO73P40031 143 aa6.15□□□□□ -1.42
PUP2YGR253C EXG2P52911 562 aa6.15□□□□□ -1.42
PUP2YGR253C YNR064CP53750 290 aa6.15□□□□□ -1.42
PUP2YGR253C APJ1P53940 528 aa6.15□□□□□ -1.42
PUP2YGR253C RSM23Q01163 450 aa6.15□□□□□ -1.42
PUP2YGR253C AIM36Q03798 255 aa6.15□□□□□ -1.42
PUP2YGR253C RRP9Q06506 573 aaKnown RBP6.15□□□□□ -1.42
PUP2YGR253C OSW1Q08692 278 aa6.15□□□□□ -1.42
PUP2YGR253C TY1A-BLQ12266 440 aa6.15□□□□□ -1.42
PUP2YGR253C SCEIP03882 235 aa6.14□□□□□ -1.43
PUP2YGR253C YCL002CP25565 263 aa6.14□□□□□ -1.43
PUP2YGR253C DPH5P32469 300 aaPredicted RBP6.14□□□□□ -1.43
PUP2YGR253C SUR1P33300 382 aa6.14□□□□□ -1.43
PUP2YGR253C YKR015CP36111 568 aa6.14□□□□□ -1.43
PUP2YGR253C PDX3P38075 228 aaKnown RBP6.14□□□□□ -1.43
PUP2YGR253C SBE22P38814 852 aa6.14□□□□□ -1.43
PUP2YGR253C CHL4P38907 458 aa6.14□□□□□ -1.43
PUP2YGR253C GZF3P42944 551 aaKnown RBP6.14□□□□□ -1.43
PUP2YGR253C GTR1Q00582 310 aa6.14□□□□□ -1.43
PUP2YGR253C YDC1Q02896 317 aa6.14□□□□□ -1.43
PUP2YGR253C SPC19Q03954 165 aa6.14□□□□□ -1.43
PUP2YGR253C SPC24Q04477 213 aa6.14□□□□□ -1.43
PUP2YGR253C BRE4Q07660 1125 aa6.14□□□□□ -1.43
PUP2YGR253C USB1Q12208 290 aaKnown RBP6.14□□□□□ -1.43
PUP2YGR253C MDN1Q12019 4910 aaKnown RBP6.14□□□□□ -1.43
PUP2YGR253C MCH2P36032 473 aa6.13□□□□□ -1.43
PUP2YGR253C SIC1P38634 284 aa6.13□□□□□ -1.43
PUP2YGR253C OST1P41543 476 aaKnown RBP6.13□□□□□ -1.43
PUP2YGR253C QRI7P43122 407 aa6.13□□□□□ -1.43
PUP2YGR253C SFH5P47008 294 aa6.13□□□□□ -1.43
PUP2YGR253C GEP7P53171 287 aa6.13□□□□□ -1.43
PUP2YGR253C TYW3P53177 273 aa6.13□□□□□ -1.43
PUP2YGR253C ELP6Q04868 273 aa6.13□□□□□ -1.43
PUP2YGR253C PRP11Q07350 266 aaPredicted RBP6.13□□□□□ -1.43
PUP2YGR253C IRC25Q07951 179 aa6.13□□□□□ -1.43
PUP2YGR253C TDH3P00359 332 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
PUP2YGR253C MEK1P24719 497 aaPredicted RBP6.12□□□□□ -1.43
PUP2YGR253C PTP2P29461 750 aa6.12□□□□□ -1.43
PUP2YGR253C BAP2P38084 609 aa6.12□□□□□ -1.43
PUP2YGR253C YHR035WP38769 630 aa6.12□□□□□ -1.43
PUP2YGR253C YAR028WP39548 234 aa6.12□□□□□ -1.43
PUP2YGR253C PIC2P40035 300 aa6.12□□□□□ -1.43
PUP2YGR253C FAR7P43592 221 aa6.12□□□□□ -1.43
PUP2YGR253C RMR1P53060 241 aa6.12□□□□□ -1.43
PUP2YGR253C PGA1P53896 198 aa6.12□□□□□ -1.43
PUP2YGR253C GPI17Q04080 534 aa6.12□□□□□ -1.43
PUP2YGR253C MLC2Q06580 163 aa6.12□□□□□ -1.43
PUP2YGR253C YOR289WQ12012 251 aaPredicted RBP6.12□□□□□ -1.43
PUP2YGR253C UBC8P28263 218 aa6.11□□□□□ -1.43
PUP2YGR253C DEG1P31115 442 aaKnown RBP6.11□□□□□ -1.43
PUP2YGR253C DAL3P32459 195 aa6.11□□□□□ -1.43
PUP2YGR253C GPI18P38211 433 aa6.11□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 97.2 ms