RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W MAL32P38158 584 aa5.58□□□□□ -1.52
MSP1YGR028W FZO1P38297 855 aa5.58□□□□□ -1.52
MSP1YGR028W PEX18P38855 283 aa5.58□□□□□ -1.52
MSP1YGR028W FET3P38993 636 aa5.58□□□□□ -1.52
MSP1YGR028W YEL068CP39977 110 aa5.58□□□□□ -1.52
MSP1YGR028W PMT6P42934 759 aa5.58□□□□□ -1.52
MSP1YGR028W YNL095CP53932 642 aa5.58□□□□□ -1.52
MSP1YGR028W YDR102CQ03864 110 aa5.58□□□□□ -1.52
MSP1YGR028W YPR147CQ06522 304 aaKnown RBP5.58□□□□□ -1.52
MSP1YGR028W COQ10Q08058 207 aa5.58□□□□□ -1.52
MSP1YGR028W GRE1Q08969 168 aa5.58□□□□□ -1.52
MSP1YGR028W DBP10Q12389 995 aaKnown RBP5.58□□□□□ -1.52
MSP1YGR028W HMS1Q12398 434 aa5.58□□□□□ -1.52
MSP1YGR028W TMA17Q12513 150 aa5.58□□□□□ -1.52
MSP1YGR028W PEP4P07267 405 aaKnown RBP5.57□□□□□ -1.52
MSP1YGR028W YOL162WP0CF19 215 aa5.57□□□□□ -1.52
MSP1YGR028W NUP1P20676 1076 aa5.57□□□□□ -1.52
MSP1YGR028W PRE2P30656 287 aaKnown RBP5.57□□□□□ -1.52
MSP1YGR028W ECM15P35195 104 aa5.57□□□□□ -1.52
MSP1YGR028W YPT53P36019 220 aa5.57□□□□□ -1.52
MSP1YGR028W RSM22P36056 628 aa5.57□□□□□ -1.52
MSP1YGR028W CDS1P38221 457 aa5.57□□□□□ -1.52
MSP1YGR028W PRS3P38689 320 aaKnown RBP5.57□□□□□ -1.52
MSP1YGR028W RCY1P39531 840 aa5.57□□□□□ -1.52
MSP1YGR028W MOB2P43563 287 aa5.57□□□□□ -1.52
MSP1YGR028W BAT2P47176 376 aaKnown RBP5.57□□□□□ -1.52
MSP1YGR028W YGR054WP53235 642 aaKnown RBP5.57□□□□□ -1.52
MSP1YGR028W MPP6P53725 186 aaPredicted RBP5.57□□□□□ -1.52
MSP1YGR028W DSL1P53847 754 aa5.57□□□□□ -1.52
MSP1YGR028W RRN5Q02983 363 aa5.57□□□□□ -1.52
MSP1YGR028W DML1Q03652 475 aa5.57□□□□□ -1.52
MSP1YGR028W YDR179W-AQ03983 463 aa5.57□□□□□ -1.52
MSP1YGR028W MRPL1Q04599 285 aa5.57□□□□□ -1.52
MSP1YGR028W NGL1Q08213 363 aaKnown RBP5.57□□□□□ -1.52
MSP1YGR028W RTC5Q12108 567 aaKnown RBP5.57□□□□□ -1.52
MSP1YGR028W RTN2Q12443 393 aa5.57□□□□□ -1.52
MSP1YGR028W YHR214C-EQ8TGK0 99 aa5.57□□□□□ -1.52
MSP1YGR028W RPC40P07703 335 aaKnown RBP5.56□□□□□ -1.52
MSP1YGR028W CAR2P07991 424 aaKnown RBP5.56□□□□□ -1.52
MSP1YGR028W SEC12P11655 471 aa5.56□□□□□ -1.52
MSP1YGR028W GIT1P25346 518 aa5.56□□□□□ -1.52
MSP1YGR028W ITR1P30605 584 aa5.56□□□□□ -1.52
MSP1YGR028W MCM10P32354 571 aa5.56□□□□□ -1.52
MSP1YGR028W TFC1P32367 649 aa5.56□□□□□ -1.52
MSP1YGR028W DAL3P32459 195 aa5.56□□□□□ -1.52
MSP1YGR028W TRS65P32893 560 aa5.56□□□□□ -1.52
MSP1YGR028W MRPS5P33759 307 aa5.56□□□□□ -1.52
MSP1YGR028W GPX1P36014 167 aa5.56□□□□□ -1.52
MSP1YGR028W YBR220CP38318 560 aa5.56□□□□□ -1.52
MSP1YGR028W PEF1P53238 335 aa5.56□□□□□ -1.52
MSP1YGR028W SNO4Q04902 237 aa5.56□□□□□ -1.52
MSP1YGR028W UTP21Q06078 939 aaPredicted RBP5.56□□□□□ -1.52
MSP1YGR028W YPR127WQ06494 345 aa5.56□□□□□ -1.52
MSP1YGR028W HSP33Q08914 237 aaKnown RBP5.56□□□□□ -1.52
MSP1YGR028W NIP7Q08962 181 aaKnown RBP5.56□□□□□ -1.52
MSP1YGR028W HSP32Q08992 237 aa5.56□□□□□ -1.52
MSP1YGR028W SPC3Q12133 184 aa5.56□□□□□ -1.52
MSP1YGR028W YLR126CQ12288 251 aa5.56□□□□□ -1.52
MSP1YGR028W MHF1Q3E835 90 aa5.56□□□□□ -1.52
MSP1YGR028W Q0297Q9ZZV8 51 aa5.56□□□□□ -1.52
MSP1YGR028W RPA135P22138 1203 aaKnown RBP5.55□□□□□ -1.52
MSP1YGR028W MTC7P32633 139 aa5.55□□□□□ -1.52
MSP1YGR028W NAB3P38996 802 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
MSP1YGR028W MIT1P40002 666 aa5.55□□□□□ -1.52
MSP1YGR028W IRC5P43610 853 aa5.55□□□□□ -1.52
MSP1YGR028W YGL235WP53071 178 aa5.55□□□□□ -1.52
MSP1YGR028W IMO32P53219 342 aa5.55□□□□□ -1.52
MSP1YGR028W YGR168CP53293 376 aa5.55□□□□□ -1.52
MSP1YGR028W MRPL19P53875 158 aa5.55□□□□□ -1.52
MSP1YGR028W ACS1Q01574 713 aa5.55□□□□□ -1.52
MSP1YGR028W RCE1Q03530 315 aa5.55□□□□□ -1.52
MSP1YGR028W CTS2Q06350 511 aa5.55□□□□□ -1.52
MSP1YGR028W RNH203Q12338 110 aa5.55□□□□□ -1.52
MSP1YGR028W RPL24AP04449 155 aaKnown RBP5.54□□□□□ -1.52
MSP1YGR028W RPL35AP0CX84 120 aaKnown RBP5.54□□□□□ -1.52
MSP1YGR028W RPL35BP0CX85 120 aaKnown RBP5.54□□□□□ -1.52
MSP1YGR028W CPR2P23285 205 aa5.54□□□□□ -1.52
MSP1YGR028W EXG1P23776 448 aaKnown RBP5.54□□□□□ -1.52
MSP1YGR028W PPA2P28239 310 aa5.54□□□□□ -1.52
MSP1YGR028W DBF20P32328 564 aa5.54□□□□□ -1.52
MSP1YGR028W PUP2P32379 260 aa5.54□□□□□ -1.52
MSP1YGR028W MDH3P32419 343 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
MSP1YGR028W PDB1P32473 366 aaKnown RBP5.54□□□□□ -1.52
MSP1YGR028W PAD1P33751 242 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
MSP1YGR028W HCS1P34243 683 aa5.54□□□□□ -1.52
MSP1YGR028W YKL071WP36086 256 aa5.54□□□□□ -1.52
MSP1YGR028W SPC34P36131 295 aa5.54□□□□□ -1.52
MSP1YGR028W RTC2P38279 296 aa5.54□□□□□ -1.52
MSP1YGR028W ALP1P38971 573 aa5.54□□□□□ -1.52
MSP1YGR028W ISC1P40015 477 aaKnown RBP5.54□□□□□ -1.52
MSP1YGR028W YER084WP40057 128 aa5.54□□□□□ -1.52
MSP1YGR028W SEC13Q04491 297 aaKnown RBP5.54□□□□□ -1.52
MSP1YGR028W NFI1Q12216 726 aa5.54□□□□□ -1.52
MSP1YGR028W PRB1P09232 635 aa5.53□□□□□ -1.52
MSP1YGR028W RPS16AP0CX51 143 aaKnown RBP5.53□□□□□ -1.52
MSP1YGR028W RPS16BP0CX52 143 aaKnown RBP5.53□□□□□ -1.52
MSP1YGR028W MSN4P33749 630 aa5.53□□□□□ -1.52
MSP1YGR028W YBR063CP38083 404 aa5.53□□□□□ -1.52
MSP1YGR028W YBR241CP38142 488 aa5.53□□□□□ -1.52
MSP1YGR028W GDI1P39958 451 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 44.5 ms